Experiment: EV116
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02364 and ECD_02365 are separated by 109 nucleotides ECD_02365 and ECD_02366 are separated by 73 nucleotides ECD_02366 and ECD_02367 are separated by 14 nucleotides
ECD_02364: ECD_02364 - putative membrane protein, UPF0370 family, at 2,457,251 to 2,457,451
_02364
ECD_02365: ECD_02365 - palmitoyl-CoA esterase activity, uncertain physiological substrate, at 2,457,561 to 2,458,259
_02365
ECD_02366: ECD_02366 - elongator methionine tRNA (ac4C34) acetyltransferase, at 2,458,333 to 2,460,348
_02366
ECD_02367: ECD_02367 - putative neutral zinc metallopeptidase, at 2,460,363 to 2,461,226
_02367
Position (kb)
2458
2459
2460
2461 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2457.346 kb on + strand, within ECD_02364 at 2457.449 kb on + strand at 2457.538 kb on + strand at 2457.551 kb on - strand at 2457.597 kb on - strand at 2457.607 kb on - strand at 2457.638 kb on + strand, within ECD_02365 at 2457.640 kb on + strand, within ECD_02365 at 2457.858 kb on - strand, within ECD_02365 at 2457.897 kb on - strand, within ECD_02365 at 2458.343 kb on - strand at 2458.392 kb on + strand at 2458.392 kb on + strand at 2458.471 kb on - strand at 2458.471 kb on - strand at 2458.474 kb on + strand at 2458.475 kb on - strand at 2458.565 kb on - strand, within ECD_02366 at 2458.775 kb on + strand, within ECD_02366 at 2458.776 kb on - strand, within ECD_02366 at 2458.899 kb on + strand, within ECD_02366 at 2458.921 kb on - strand, within ECD_02366 at 2459.248 kb on + strand, within ECD_02366 at 2459.304 kb on + strand, within ECD_02366 at 2459.798 kb on - strand, within ECD_02366 at 2459.919 kb on + strand, within ECD_02366 at 2460.145 kb on + strand, within ECD_02366 at 2460.238 kb on - strand at 2460.238 kb on - strand at 2460.238 kb on - strand at 2460.244 kb on - strand at 2460.244 kb on - strand at 2460.471 kb on + strand, within ECD_02367 at 2460.578 kb on + strand, within ECD_02367 at 2460.578 kb on + strand, within ECD_02367 at 2460.578 kb on + strand, within ECD_02367 at 2460.579 kb on - strand, within ECD_02367 at 2460.579 kb on - strand, within ECD_02367 at 2460.581 kb on + strand, within ECD_02367 at 2460.581 kb on + strand, within ECD_02367 at 2460.582 kb on - strand, within ECD_02367 at 2460.634 kb on - strand, within ECD_02367 at 2460.634 kb on - strand, within ECD_02367 at 2460.696 kb on + strand, within ECD_02367 at 2460.790 kb on + strand, within ECD_02367 at 2460.790 kb on + strand, within ECD_02367 at 2460.790 kb on + strand, within ECD_02367 at 2460.791 kb on - strand, within ECD_02367 at 2460.890 kb on - strand, within ECD_02367 at 2460.890 kb on - strand, within ECD_02367 at 2460.914 kb on - strand, within ECD_02367 at 2461.079 kb on - strand, within ECD_02367 at 2461.108 kb on - strand, within ECD_02367 at 2461.231 kb on - strand at 2461.231 kb on - strand at 2461.231 kb on - strand at 2461.231 kb on - strand at 2461.241 kb on + strand at 2461.252 kb on + strand at 2461.253 kb on - strand at 2461.335 kb on + strand at 2461.335 kb on + strand at 2461.335 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction EV116 remove 2,457,346 + ECD_02364 0.47 -1.1 2,457,449 + -1.5 2,457,538 + +0.4 2,457,551 - -0.2 2,457,597 - -0.7 2,457,607 - +0.9 2,457,638 + ECD_02365 0.11 +0.5 2,457,640 + ECD_02365 0.11 +0.9 2,457,858 - ECD_02365 0.42 +0.2 2,457,897 - ECD_02365 0.48 -0.2 2,458,343 - -0.5 2,458,392 + +1.0 2,458,392 + -0.5 2,458,471 - +1.2 2,458,471 - +1.8 2,458,474 + -1.2 2,458,475 - -1.7 2,458,565 - ECD_02366 0.12 +0.3 2,458,775 + ECD_02366 0.22 +0.6 2,458,776 - ECD_02366 0.22 -1.3 2,458,899 + ECD_02366 0.28 -1.6 2,458,921 - ECD_02366 0.29 -1.8 2,459,248 + ECD_02366 0.45 -0.1 2,459,304 + ECD_02366 0.48 -0.8 2,459,798 - ECD_02366 0.73 -1.1 2,459,919 + ECD_02366 0.79 -0.7 2,460,145 + ECD_02366 0.90 +0.1 2,460,238 - -0.5 2,460,238 - -0.5 2,460,238 - -0.8 2,460,244 - -1.6 2,460,244 - -1.3 2,460,471 + ECD_02367 0.12 +0.9 2,460,578 + ECD_02367 0.25 +1.7 2,460,578 + ECD_02367 0.25 -0.3 2,460,578 + ECD_02367 0.25 -0.6 2,460,579 - ECD_02367 0.25 +1.1 2,460,579 - ECD_02367 0.25 -0.2 2,460,581 + ECD_02367 0.25 -1.1 2,460,581 + ECD_02367 0.25 +0.7 2,460,582 - ECD_02367 0.25 -0.2 2,460,634 - ECD_02367 0.31 -0.4 2,460,634 - ECD_02367 0.31 +0.8 2,460,696 + ECD_02367 0.39 +0.2 2,460,790 + ECD_02367 0.49 +0.7 2,460,790 + ECD_02367 0.49 -0.4 2,460,790 + ECD_02367 0.49 +1.2 2,460,791 - ECD_02367 0.50 -0.8 2,460,890 - ECD_02367 0.61 +0.1 2,460,890 - ECD_02367 0.61 +1.2 2,460,914 - ECD_02367 0.64 +0.6 2,461,079 - ECD_02367 0.83 -0.6 2,461,108 - ECD_02367 0.86 -0.4 2,461,231 - -1.5 2,461,231 - +0.3 2,461,231 - +1.4 2,461,231 - +0.0 2,461,241 + +0.2 2,461,252 + -0.5 2,461,253 - +0.1 2,461,335 + -1.0 2,461,335 + +0.4 2,461,335 + -0.8
Or see this region's nucleotide sequence