Strain Fitness in Escherichia coli BL21 around ECD_02048

Experiment: EV116

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02046 and ECD_02047 are separated by 60 nucleotidesECD_02047 and ECD_02048 are separated by 306 nucleotidesECD_02048 and ECD_02049 are separated by 10 nucleotides ECD_02046: ECD_02046 - DUF4132 domain-containing protein, at 2,095,141 to 2,098,773 _02046 ECD_02047: ECD_02047 - uncharacterized protein, at 2,098,834 to 2,099,151 _02047 ECD_02048: ECD_02048 - putative hexameric AAA+ MoxR family ATPase, at 2,099,458 to 2,100,546 _02048 ECD_02049: ECD_02049 - uncharacterized protein, at 2,100,557 to 2,102,836 _02049 Position (kb) 2099 2100 2101Strain fitness (log2 ratio) -2 -1 0 1at 2098.582 kb on + strandat 2099.661 kb on + strand, within ECD_02048at 2099.818 kb on + strand, within ECD_02048at 2099.818 kb on + strand, within ECD_02048at 2099.966 kb on + strand, within ECD_02048at 2099.971 kb on - strand, within ECD_02048at 2100.217 kb on - strand, within ECD_02048at 2100.518 kb on - strandat 2100.724 kb on + strandat 2100.743 kb on + strandat 2101.126 kb on + strand, within ECD_02049at 2101.140 kb on + strand, within ECD_02049at 2101.140 kb on + strand, within ECD_02049at 2101.254 kb on - strand, within ECD_02049at 2101.483 kb on + strand, within ECD_02049at 2101.484 kb on - strand, within ECD_02049at 2101.484 kb on - strand, within ECD_02049at 2101.488 kb on + strand, within ECD_02049

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Per-strain Table

Position Strand Gene LocusTag Fraction EV116
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2,098,582 + +0.7
2,099,661 + ECD_02048 0.19 +0.3
2,099,818 + ECD_02048 0.33 -0.1
2,099,818 + ECD_02048 0.33 +1.3
2,099,966 + ECD_02048 0.47 -0.4
2,099,971 - ECD_02048 0.47 +0.5
2,100,217 - ECD_02048 0.70 -1.1
2,100,518 - +0.8
2,100,724 + -2.3
2,100,743 + +0.4
2,101,126 + ECD_02049 0.25 +1.2
2,101,140 + ECD_02049 0.26 +1.5
2,101,140 + ECD_02049 0.26 -1.7
2,101,254 - ECD_02049 0.31 +0.3
2,101,483 + ECD_02049 0.41 +0.5
2,101,484 - ECD_02049 0.41 +0.4
2,101,484 - ECD_02049 0.41 +0.6
2,101,488 + ECD_02049 0.41 -0.2

Or see this region's nucleotide sequence