Strain Fitness in Escherichia coli BL21 around ECD_01847

Experiment: EV116

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01845 and ECD_01846 are separated by 13 nucleotidesECD_01846 and ECD_01847 are separated by 215 nucleotidesECD_01847 and ECD_01848 are separated by 176 nucleotidesECD_01848 and ECD_01849 are separated by 119 nucleotides ECD_01845: ECD_01845 - copper homeostasis protein, at 1,904,438 to 1,905,184 _01845 ECD_01846: ECD_01846 - putative metal-binding enzyme, at 1,905,198 to 1,905,764 _01846 ECD_01847: ECD_01847 - arginyl-tRNA synthetase, at 1,905,980 to 1,907,713 _01847 ECD_01848: ECD_01848 - uncharacterized protein, at 1,907,890 to 1,908,378 _01848 ECD_01849: ECD_01849 - proton seal during flagellar secretion, at 1,908,498 to 1,908,890 _01849 Position (kb) 1905 1906 1907 1908Strain fitness (log2 ratio) -1 0 1 2at 1905.254 kb on + strandat 1905.729 kb on - strandat 1907.777 kb on - strandat 1908.643 kb on - strand, within ECD_01849

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Per-strain Table

Position Strand Gene LocusTag Fraction EV116
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1,905,254 + +2.3
1,905,729 - +0.1
1,907,777 - +2.0
1,908,643 - ECD_01849 0.37 -1.0

Or see this region's nucleotide sequence