Experiment: EV116
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03283 and ECD_03284 overlap by 4 nucleotides ECD_03284 and ECD_03285 are separated by 272 nucleotides
ECD_03283: ECD_03283 - glycogen debranching enzyme, at 3,432,496 to 3,434,469
_03283
ECD_03284: ECD_03284 - 1,4-alpha-glucan branching enzyme, at 3,434,466 to 3,436,652
_03284
ECD_03285: ECD_03285 - aspartate-semialdehyde dehydrogenase, NAD(P)-binding, at 3,436,925 to 3,438,028
_03285
Position (kb)
3434
3435
3436
3437 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 3433.495 kb on + strand, within ECD_03283 at 3433.524 kb on - strand, within ECD_03283 at 3433.601 kb on - strand, within ECD_03283 at 3433.607 kb on + strand, within ECD_03283 at 3433.610 kb on + strand, within ECD_03283 at 3433.610 kb on + strand, within ECD_03283 at 3433.611 kb on - strand, within ECD_03283 at 3433.611 kb on - strand, within ECD_03283 at 3433.611 kb on - strand, within ECD_03283 at 3433.611 kb on - strand, within ECD_03283 at 3433.614 kb on + strand, within ECD_03283 at 3433.614 kb on + strand, within ECD_03283 at 3433.615 kb on - strand, within ECD_03283 at 3433.615 kb on - strand, within ECD_03283 at 3433.672 kb on - strand, within ECD_03283 at 3433.773 kb on - strand, within ECD_03283 at 3433.808 kb on + strand, within ECD_03283 at 3433.809 kb on - strand, within ECD_03283 at 3433.817 kb on + strand, within ECD_03283 at 3433.821 kb on + strand, within ECD_03283 at 3433.821 kb on + strand, within ECD_03283 at 3433.821 kb on + strand, within ECD_03283 at 3433.822 kb on - strand, within ECD_03283 at 3433.822 kb on - strand, within ECD_03283 at 3433.822 kb on - strand, within ECD_03283 at 3433.822 kb on - strand, within ECD_03283 at 3433.941 kb on + strand, within ECD_03283 at 3433.941 kb on + strand, within ECD_03283 at 3433.942 kb on - strand, within ECD_03283 at 3433.942 kb on - strand, within ECD_03283 at 3433.943 kb on + strand, within ECD_03283 at 3433.944 kb on - strand, within ECD_03283 at 3433.944 kb on - strand, within ECD_03283 at 3433.944 kb on - strand, within ECD_03283 at 3433.944 kb on - strand, within ECD_03283 at 3433.982 kb on + strand, within ECD_03283 at 3433.982 kb on + strand, within ECD_03283 at 3433.983 kb on - strand, within ECD_03283 at 3434.010 kb on - strand, within ECD_03283 at 3434.010 kb on - strand, within ECD_03283 at 3434.010 kb on - strand, within ECD_03283 at 3434.010 kb on - strand, within ECD_03283 at 3434.010 kb on - strand, within ECD_03283 at 3434.063 kb on + strand, within ECD_03283 at 3434.063 kb on + strand, within ECD_03283 at 3434.064 kb on - strand, within ECD_03283 at 3434.128 kb on - strand, within ECD_03283 at 3434.128 kb on - strand, within ECD_03283 at 3434.128 kb on - strand, within ECD_03283 at 3434.292 kb on - strand at 3434.292 kb on - strand at 3434.424 kb on - strand at 3434.424 kb on - strand at 3434.492 kb on + strand at 3434.493 kb on - strand at 3434.563 kb on - strand at 3434.586 kb on - strand at 3434.586 kb on - strand at 3434.596 kb on + strand at 3434.597 kb on - strand at 3434.612 kb on + strand at 3434.659 kb on + strand at 3434.688 kb on - strand, within ECD_03284 at 3434.813 kb on + strand, within ECD_03284 at 3434.813 kb on + strand, within ECD_03284 at 3434.824 kb on + strand, within ECD_03284 at 3434.825 kb on - strand, within ECD_03284 at 3434.959 kb on - strand, within ECD_03284 at 3434.959 kb on - strand, within ECD_03284 at 3434.959 kb on - strand, within ECD_03284 at 3434.992 kb on + strand, within ECD_03284 at 3434.992 kb on + strand, within ECD_03284 at 3434.993 kb on - strand, within ECD_03284 at 3434.995 kb on + strand, within ECD_03284 at 3434.995 kb on + strand, within ECD_03284 at 3434.995 kb on + strand, within ECD_03284 at 3434.996 kb on - strand, within ECD_03284 at 3434.996 kb on - strand, within ECD_03284 at 3435.109 kb on + strand, within ECD_03284 at 3435.109 kb on + strand, within ECD_03284 at 3435.110 kb on - strand, within ECD_03284 at 3435.110 kb on - strand, within ECD_03284 at 3435.148 kb on + strand, within ECD_03284 at 3435.157 kb on + strand, within ECD_03284 at 3435.178 kb on + strand, within ECD_03284 at 3435.178 kb on + strand, within ECD_03284 at 3435.178 kb on + strand, within ECD_03284 at 3435.178 kb on + strand, within ECD_03284 at 3435.179 kb on - strand, within ECD_03284 at 3435.179 kb on - strand, within ECD_03284 at 3435.179 kb on - strand, within ECD_03284 at 3435.217 kb on + strand, within ECD_03284 at 3435.218 kb on - strand, within ECD_03284 at 3435.320 kb on + strand, within ECD_03284 at 3435.321 kb on - strand, within ECD_03284 at 3435.330 kb on - strand, within ECD_03284 at 3435.330 kb on - strand, within ECD_03284 at 3435.333 kb on - strand, within ECD_03284 at 3435.333 kb on - strand, within ECD_03284 at 3435.333 kb on - strand, within ECD_03284 at 3435.409 kb on + strand, within ECD_03284 at 3435.459 kb on - strand, within ECD_03284 at 3435.478 kb on + strand, within ECD_03284 at 3435.523 kb on + strand, within ECD_03284 at 3435.523 kb on + strand, within ECD_03284 at 3435.523 kb on + strand, within ECD_03284 at 3435.523 kb on + strand, within ECD_03284 at 3435.523 kb on + strand, within ECD_03284 at 3435.523 kb on + strand, within ECD_03284 at 3435.523 kb on + strand, within ECD_03284 at 3435.523 kb on + strand, within ECD_03284 at 3435.524 kb on - strand, within ECD_03284 at 3435.524 kb on - strand, within ECD_03284 at 3435.524 kb on - strand, within ECD_03284 at 3435.524 kb on - strand, within ECD_03284 at 3435.524 kb on - strand, within ECD_03284 at 3435.524 kb on - strand, within ECD_03284 at 3435.524 kb on - strand, within ECD_03284 at 3435.530 kb on - strand, within ECD_03284 at 3435.530 kb on - strand, within ECD_03284 at 3435.530 kb on - strand, within ECD_03284 at 3435.583 kb on + strand, within ECD_03284 at 3435.695 kb on - strand, within ECD_03284 at 3435.736 kb on + strand, within ECD_03284 at 3435.737 kb on - strand, within ECD_03284 at 3435.796 kb on - strand, within ECD_03284 at 3435.825 kb on - strand, within ECD_03284 at 3435.830 kb on - strand, within ECD_03284 at 3435.830 kb on - strand, within ECD_03284 at 3435.917 kb on - strand, within ECD_03284 at 3435.917 kb on - strand, within ECD_03284 at 3435.920 kb on + strand, within ECD_03284 at 3435.921 kb on - strand, within ECD_03284 at 3435.969 kb on + strand, within ECD_03284 at 3435.970 kb on - strand, within ECD_03284 at 3435.996 kb on - strand, within ECD_03284 at 3436.085 kb on - strand, within ECD_03284 at 3436.085 kb on - strand, within ECD_03284 at 3436.089 kb on - strand, within ECD_03284 at 3436.089 kb on - strand, within ECD_03284 at 3436.104 kb on - strand, within ECD_03284 at 3436.260 kb on - strand, within ECD_03284 at 3436.262 kb on + strand, within ECD_03284 at 3436.262 kb on + strand, within ECD_03284 at 3436.262 kb on + strand, within ECD_03284 at 3436.263 kb on - strand, within ECD_03284 at 3436.263 kb on - strand, within ECD_03284 at 3436.263 kb on - strand, within ECD_03284 at 3436.263 kb on - strand, within ECD_03284 at 3436.263 kb on - strand, within ECD_03284 at 3436.263 kb on - strand, within ECD_03284 at 3436.263 kb on - strand, within ECD_03284 at 3436.263 kb on - strand, within ECD_03284 at 3436.305 kb on - strand, within ECD_03284 at 3436.305 kb on - strand, within ECD_03284 at 3436.318 kb on - strand, within ECD_03284 at 3436.318 kb on - strand, within ECD_03284 at 3436.568 kb on + strand at 3436.569 kb on - strand at 3436.669 kb on + strand at 3436.778 kb on - strand at 3436.789 kb on + strand at 3436.790 kb on - strand at 3436.790 kb on - strand at 3436.797 kb on + strand at 3436.798 kb on - strand at 3436.798 kb on - strand at 3436.866 kb on + strand at 3436.866 kb on + strand at 3436.867 kb on - strand at 3436.874 kb on + strand at 3436.874 kb on + strand at 3436.875 kb on - strand at 3436.875 kb on - strand at 3436.877 kb on + strand at 3436.885 kb on - strand at 3436.913 kb on - strand at 3436.919 kb on + strand at 3436.926 kb on + strand at 3436.926 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction EV116 remove 3,433,495 + ECD_03283 0.51 +0.6 3,433,524 - ECD_03283 0.52 +0.6 3,433,601 - ECD_03283 0.56 -0.6 3,433,607 + ECD_03283 0.56 -1.3 3,433,610 + ECD_03283 0.56 +1.0 3,433,610 + ECD_03283 0.56 -0.7 3,433,611 - ECD_03283 0.56 +0.2 3,433,611 - ECD_03283 0.56 -0.3 3,433,611 - ECD_03283 0.56 +0.1 3,433,611 - ECD_03283 0.56 -1.4 3,433,614 + ECD_03283 0.57 -1.4 3,433,614 + ECD_03283 0.57 -0.9 3,433,615 - ECD_03283 0.57 -1.2 3,433,615 - ECD_03283 0.57 -0.2 3,433,672 - ECD_03283 0.60 +1.2 3,433,773 - ECD_03283 0.65 +1.0 3,433,808 + ECD_03283 0.66 +0.3 3,433,809 - ECD_03283 0.67 -0.8 3,433,817 + ECD_03283 0.67 -0.9 3,433,821 + ECD_03283 0.67 -0.1 3,433,821 + ECD_03283 0.67 +1.3 3,433,821 + ECD_03283 0.67 -0.3 3,433,822 - ECD_03283 0.67 +0.9 3,433,822 - ECD_03283 0.67 -0.6 3,433,822 - ECD_03283 0.67 -1.9 3,433,822 - ECD_03283 0.67 -0.0 3,433,941 + ECD_03283 0.73 -1.3 3,433,941 + ECD_03283 0.73 +0.4 3,433,942 - ECD_03283 0.73 -0.2 3,433,942 - ECD_03283 0.73 +0.2 3,433,943 + ECD_03283 0.73 +0.5 3,433,944 - ECD_03283 0.73 +0.0 3,433,944 - ECD_03283 0.73 +0.2 3,433,944 - ECD_03283 0.73 -0.7 3,433,944 - ECD_03283 0.73 -0.8 3,433,982 + ECD_03283 0.75 +0.6 3,433,982 + ECD_03283 0.75 -0.1 3,433,983 - ECD_03283 0.75 +0.4 3,434,010 - ECD_03283 0.77 +0.4 3,434,010 - ECD_03283 0.77 +0.3 3,434,010 - ECD_03283 0.77 +1.4 3,434,010 - ECD_03283 0.77 +1.3 3,434,010 - ECD_03283 0.77 -0.5 3,434,063 + ECD_03283 0.79 +1.5 3,434,063 + ECD_03283 0.79 -0.0 3,434,064 - ECD_03283 0.79 +0.8 3,434,128 - ECD_03283 0.83 +0.0 3,434,128 - ECD_03283 0.83 -0.5 3,434,128 - ECD_03283 0.83 -0.4 3,434,292 - -2.5 3,434,292 - +0.1 3,434,424 - +0.9 3,434,424 - +0.3 3,434,492 + +0.8 3,434,493 - +2.5 3,434,563 - +1.4 3,434,586 - +0.7 3,434,586 - +1.6 3,434,596 + +0.1 3,434,597 - +2.6 3,434,612 + -1.4 3,434,659 + +0.5 3,434,688 - ECD_03284 0.10 +1.1 3,434,813 + ECD_03284 0.16 -0.0 3,434,813 + ECD_03284 0.16 +0.7 3,434,824 + ECD_03284 0.16 +1.1 3,434,825 - ECD_03284 0.16 +1.0 3,434,959 - ECD_03284 0.23 +0.7 3,434,959 - ECD_03284 0.23 -0.2 3,434,959 - ECD_03284 0.23 +0.8 3,434,992 + ECD_03284 0.24 +0.7 3,434,992 + ECD_03284 0.24 +0.8 3,434,993 - ECD_03284 0.24 +0.7 3,434,995 + ECD_03284 0.24 -0.9 3,434,995 + ECD_03284 0.24 +0.8 3,434,995 + ECD_03284 0.24 +0.5 3,434,996 - ECD_03284 0.24 +0.9 3,434,996 - ECD_03284 0.24 +1.5 3,435,109 + ECD_03284 0.29 +0.6 3,435,109 + ECD_03284 0.29 +0.1 3,435,110 - ECD_03284 0.29 +4.9 3,435,110 - ECD_03284 0.29 +0.7 3,435,148 + ECD_03284 0.31 +0.1 3,435,157 + ECD_03284 0.32 -0.2 3,435,178 + ECD_03284 0.33 -0.2 3,435,178 + ECD_03284 0.33 +0.8 3,435,178 + ECD_03284 0.33 -0.7 3,435,178 + ECD_03284 0.33 +0.5 3,435,179 - ECD_03284 0.33 +0.8 3,435,179 - ECD_03284 0.33 +0.7 3,435,179 - ECD_03284 0.33 +0.1 3,435,217 + ECD_03284 0.34 +0.6 3,435,218 - ECD_03284 0.34 +0.7 3,435,320 + ECD_03284 0.39 -0.9 3,435,321 - ECD_03284 0.39 +1.2 3,435,330 - ECD_03284 0.40 +1.7 3,435,330 - ECD_03284 0.40 -1.0 3,435,333 - ECD_03284 0.40 +2.0 3,435,333 - ECD_03284 0.40 -0.1 3,435,333 - ECD_03284 0.40 +0.9 3,435,409 + ECD_03284 0.43 +1.6 3,435,459 - ECD_03284 0.45 +0.8 3,435,478 + ECD_03284 0.46 -1.3 3,435,523 + ECD_03284 0.48 +1.6 3,435,523 + ECD_03284 0.48 -0.0 3,435,523 + ECD_03284 0.48 -1.6 3,435,523 + ECD_03284 0.48 -0.4 3,435,523 + ECD_03284 0.48 +0.5 3,435,523 + ECD_03284 0.48 +0.2 3,435,523 + ECD_03284 0.48 -0.1 3,435,523 + ECD_03284 0.48 +1.0 3,435,524 - ECD_03284 0.48 -1.1 3,435,524 - ECD_03284 0.48 +0.5 3,435,524 - ECD_03284 0.48 -0.5 3,435,524 - ECD_03284 0.48 -2.1 3,435,524 - ECD_03284 0.48 +0.4 3,435,524 - ECD_03284 0.48 +0.0 3,435,524 - ECD_03284 0.48 +2.5 3,435,530 - ECD_03284 0.49 -0.4 3,435,530 - ECD_03284 0.49 -0.2 3,435,530 - ECD_03284 0.49 +0.2 3,435,583 + ECD_03284 0.51 +1.2 3,435,695 - ECD_03284 0.56 -2.2 3,435,736 + ECD_03284 0.58 +0.2 3,435,737 - ECD_03284 0.58 +2.3 3,435,796 - ECD_03284 0.61 +0.9 3,435,825 - ECD_03284 0.62 +0.0 3,435,830 - ECD_03284 0.62 -0.2 3,435,830 - ECD_03284 0.62 +0.0 3,435,917 - ECD_03284 0.66 -0.5 3,435,917 - ECD_03284 0.66 -0.1 3,435,920 + ECD_03284 0.66 +1.0 3,435,921 - ECD_03284 0.67 -0.2 3,435,969 + ECD_03284 0.69 +0.3 3,435,970 - ECD_03284 0.69 +1.0 3,435,996 - ECD_03284 0.70 -1.7 3,436,085 - ECD_03284 0.74 +0.7 3,436,085 - ECD_03284 0.74 +0.9 3,436,089 - ECD_03284 0.74 +0.3 3,436,089 - ECD_03284 0.74 +0.7 3,436,104 - ECD_03284 0.75 -1.0 3,436,260 - ECD_03284 0.82 +0.5 3,436,262 + ECD_03284 0.82 +0.2 3,436,262 + ECD_03284 0.82 -0.6 3,436,262 + ECD_03284 0.82 +1.2 3,436,263 - ECD_03284 0.82 -0.7 3,436,263 - ECD_03284 0.82 +0.2 3,436,263 - ECD_03284 0.82 -0.5 3,436,263 - ECD_03284 0.82 -0.1 3,436,263 - ECD_03284 0.82 -1.1 3,436,263 - ECD_03284 0.82 -0.3 3,436,263 - ECD_03284 0.82 +0.3 3,436,263 - ECD_03284 0.82 -0.7 3,436,305 - ECD_03284 0.84 -0.2 3,436,305 - ECD_03284 0.84 -0.7 3,436,318 - ECD_03284 0.85 +0.7 3,436,318 - ECD_03284 0.85 +0.5 3,436,568 + -0.1 3,436,569 - -1.8 3,436,669 + -0.3 3,436,778 - -1.2 3,436,789 + +0.8 3,436,790 - +1.5 3,436,790 - +0.3 3,436,797 + +1.9 3,436,798 - +0.1 3,436,798 - +0.0 3,436,866 + -0.5 3,436,866 + +0.2 3,436,867 - -0.0 3,436,874 + +0.1 3,436,874 + -0.1 3,436,875 - -0.2 3,436,875 - +0.1 3,436,877 + -0.6 3,436,885 - +0.1 3,436,913 - -0.4 3,436,919 + +1.0 3,436,926 + -0.5 3,436,926 + +0.5
Or see this region's nucleotide sequence