Strain Fitness in Escherichia coli BL21 around ECD_03284

Experiment: EV116

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03283 and ECD_03284 overlap by 4 nucleotidesECD_03284 and ECD_03285 are separated by 272 nucleotides ECD_03283: ECD_03283 - glycogen debranching enzyme, at 3,432,496 to 3,434,469 _03283 ECD_03284: ECD_03284 - 1,4-alpha-glucan branching enzyme, at 3,434,466 to 3,436,652 _03284 ECD_03285: ECD_03285 - aspartate-semialdehyde dehydrogenase, NAD(P)-binding, at 3,436,925 to 3,438,028 _03285 Position (kb) 3434 3435 3436 3437Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 3433.495 kb on + strand, within ECD_03283at 3433.524 kb on - strand, within ECD_03283at 3433.601 kb on - strand, within ECD_03283at 3433.607 kb on + strand, within ECD_03283at 3433.610 kb on + strand, within ECD_03283at 3433.610 kb on + strand, within ECD_03283at 3433.611 kb on - strand, within ECD_03283at 3433.611 kb on - strand, within ECD_03283at 3433.611 kb on - strand, within ECD_03283at 3433.611 kb on - strand, within ECD_03283at 3433.614 kb on + strand, within ECD_03283at 3433.614 kb on + strand, within ECD_03283at 3433.615 kb on - strand, within ECD_03283at 3433.615 kb on - strand, within ECD_03283at 3433.672 kb on - strand, within ECD_03283at 3433.773 kb on - strand, within ECD_03283at 3433.808 kb on + strand, within ECD_03283at 3433.809 kb on - strand, within ECD_03283at 3433.817 kb on + strand, within ECD_03283at 3433.821 kb on + strand, within ECD_03283at 3433.821 kb on + strand, within ECD_03283at 3433.821 kb on + strand, within ECD_03283at 3433.822 kb on - strand, within ECD_03283at 3433.822 kb on - strand, within ECD_03283at 3433.822 kb on - strand, within ECD_03283at 3433.822 kb on - strand, within ECD_03283at 3433.941 kb on + strand, within ECD_03283at 3433.941 kb on + strand, within ECD_03283at 3433.942 kb on - strand, within ECD_03283at 3433.942 kb on - strand, within ECD_03283at 3433.943 kb on + strand, within ECD_03283at 3433.944 kb on - strand, within ECD_03283at 3433.944 kb on - strand, within ECD_03283at 3433.944 kb on - strand, within ECD_03283at 3433.944 kb on - strand, within ECD_03283at 3433.982 kb on + strand, within ECD_03283at 3433.982 kb on + strand, within ECD_03283at 3433.983 kb on - strand, within ECD_03283at 3434.010 kb on - strand, within ECD_03283at 3434.010 kb on - strand, within ECD_03283at 3434.010 kb on - strand, within ECD_03283at 3434.010 kb on - strand, within ECD_03283at 3434.010 kb on - strand, within ECD_03283at 3434.063 kb on + strand, within ECD_03283at 3434.063 kb on + strand, within ECD_03283at 3434.064 kb on - strand, within ECD_03283at 3434.128 kb on - strand, within ECD_03283at 3434.128 kb on - strand, within ECD_03283at 3434.128 kb on - strand, within ECD_03283at 3434.292 kb on - strandat 3434.292 kb on - strandat 3434.424 kb on - strandat 3434.424 kb on - strandat 3434.492 kb on + strandat 3434.493 kb on - strandat 3434.563 kb on - strandat 3434.586 kb on - strandat 3434.586 kb on - strandat 3434.596 kb on + strandat 3434.597 kb on - strandat 3434.612 kb on + strandat 3434.659 kb on + strandat 3434.688 kb on - strand, within ECD_03284at 3434.813 kb on + strand, within ECD_03284at 3434.813 kb on + strand, within ECD_03284at 3434.824 kb on + strand, within ECD_03284at 3434.825 kb on - strand, within ECD_03284at 3434.959 kb on - strand, within ECD_03284at 3434.959 kb on - strand, within ECD_03284at 3434.959 kb on - strand, within ECD_03284at 3434.992 kb on + strand, within ECD_03284at 3434.992 kb on + strand, within ECD_03284at 3434.993 kb on - strand, within ECD_03284at 3434.995 kb on + strand, within ECD_03284at 3434.995 kb on + strand, within ECD_03284at 3434.995 kb on + strand, within ECD_03284at 3434.996 kb on - strand, within ECD_03284at 3434.996 kb on - strand, within ECD_03284at 3435.109 kb on + strand, within ECD_03284at 3435.109 kb on + strand, within ECD_03284at 3435.110 kb on - strand, within ECD_03284at 3435.110 kb on - strand, within ECD_03284at 3435.148 kb on + strand, within ECD_03284at 3435.157 kb on + strand, within ECD_03284at 3435.178 kb on + strand, within ECD_03284at 3435.178 kb on + strand, within ECD_03284at 3435.178 kb on + strand, within ECD_03284at 3435.178 kb on + strand, within ECD_03284at 3435.179 kb on - strand, within ECD_03284at 3435.179 kb on - strand, within ECD_03284at 3435.179 kb on - strand, within ECD_03284at 3435.217 kb on + strand, within ECD_03284at 3435.218 kb on - strand, within ECD_03284at 3435.320 kb on + strand, within ECD_03284at 3435.321 kb on - strand, within ECD_03284at 3435.330 kb on - strand, within ECD_03284at 3435.330 kb on - strand, within ECD_03284at 3435.333 kb on - strand, within ECD_03284at 3435.333 kb on - strand, within ECD_03284at 3435.333 kb on - strand, within ECD_03284at 3435.409 kb on + strand, within ECD_03284at 3435.459 kb on - strand, within ECD_03284at 3435.478 kb on + strand, within ECD_03284at 3435.523 kb on + strand, within ECD_03284at 3435.523 kb on + strand, within ECD_03284at 3435.523 kb on + strand, within ECD_03284at 3435.523 kb on + strand, within ECD_03284at 3435.523 kb on + strand, within ECD_03284at 3435.523 kb on + strand, within ECD_03284at 3435.523 kb on + strand, within ECD_03284at 3435.523 kb on + strand, within ECD_03284at 3435.524 kb on - strand, within ECD_03284at 3435.524 kb on - strand, within ECD_03284at 3435.524 kb on - strand, within ECD_03284at 3435.524 kb on - strand, within ECD_03284at 3435.524 kb on - strand, within ECD_03284at 3435.524 kb on - strand, within ECD_03284at 3435.524 kb on - strand, within ECD_03284at 3435.530 kb on - strand, within ECD_03284at 3435.530 kb on - strand, within ECD_03284at 3435.530 kb on - strand, within ECD_03284at 3435.583 kb on + strand, within ECD_03284at 3435.695 kb on - strand, within ECD_03284at 3435.736 kb on + strand, within ECD_03284at 3435.737 kb on - strand, within ECD_03284at 3435.796 kb on - strand, within ECD_03284at 3435.825 kb on - strand, within ECD_03284at 3435.830 kb on - strand, within ECD_03284at 3435.830 kb on - strand, within ECD_03284at 3435.917 kb on - strand, within ECD_03284at 3435.917 kb on - strand, within ECD_03284at 3435.920 kb on + strand, within ECD_03284at 3435.921 kb on - strand, within ECD_03284at 3435.969 kb on + strand, within ECD_03284at 3435.970 kb on - strand, within ECD_03284at 3435.996 kb on - strand, within ECD_03284at 3436.085 kb on - strand, within ECD_03284at 3436.085 kb on - strand, within ECD_03284at 3436.089 kb on - strand, within ECD_03284at 3436.089 kb on - strand, within ECD_03284at 3436.104 kb on - strand, within ECD_03284at 3436.260 kb on - strand, within ECD_03284at 3436.262 kb on + strand, within ECD_03284at 3436.262 kb on + strand, within ECD_03284at 3436.262 kb on + strand, within ECD_03284at 3436.263 kb on - strand, within ECD_03284at 3436.263 kb on - strand, within ECD_03284at 3436.263 kb on - strand, within ECD_03284at 3436.263 kb on - strand, within ECD_03284at 3436.263 kb on - strand, within ECD_03284at 3436.263 kb on - strand, within ECD_03284at 3436.263 kb on - strand, within ECD_03284at 3436.263 kb on - strand, within ECD_03284at 3436.305 kb on - strand, within ECD_03284at 3436.305 kb on - strand, within ECD_03284at 3436.318 kb on - strand, within ECD_03284at 3436.318 kb on - strand, within ECD_03284at 3436.568 kb on + strandat 3436.569 kb on - strandat 3436.669 kb on + strandat 3436.778 kb on - strandat 3436.789 kb on + strandat 3436.790 kb on - strandat 3436.790 kb on - strandat 3436.797 kb on + strandat 3436.798 kb on - strandat 3436.798 kb on - strandat 3436.866 kb on + strandat 3436.866 kb on + strandat 3436.867 kb on - strandat 3436.874 kb on + strandat 3436.874 kb on + strandat 3436.875 kb on - strandat 3436.875 kb on - strandat 3436.877 kb on + strandat 3436.885 kb on - strandat 3436.913 kb on - strandat 3436.919 kb on + strandat 3436.926 kb on + strandat 3436.926 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction EV116
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3,433,495 + ECD_03283 0.51 +0.6
3,433,524 - ECD_03283 0.52 +0.6
3,433,601 - ECD_03283 0.56 -0.6
3,433,607 + ECD_03283 0.56 -1.3
3,433,610 + ECD_03283 0.56 +1.0
3,433,610 + ECD_03283 0.56 -0.7
3,433,611 - ECD_03283 0.56 +0.2
3,433,611 - ECD_03283 0.56 -0.3
3,433,611 - ECD_03283 0.56 +0.1
3,433,611 - ECD_03283 0.56 -1.4
3,433,614 + ECD_03283 0.57 -1.4
3,433,614 + ECD_03283 0.57 -0.9
3,433,615 - ECD_03283 0.57 -1.2
3,433,615 - ECD_03283 0.57 -0.2
3,433,672 - ECD_03283 0.60 +1.2
3,433,773 - ECD_03283 0.65 +1.0
3,433,808 + ECD_03283 0.66 +0.3
3,433,809 - ECD_03283 0.67 -0.8
3,433,817 + ECD_03283 0.67 -0.9
3,433,821 + ECD_03283 0.67 -0.1
3,433,821 + ECD_03283 0.67 +1.3
3,433,821 + ECD_03283 0.67 -0.3
3,433,822 - ECD_03283 0.67 +0.9
3,433,822 - ECD_03283 0.67 -0.6
3,433,822 - ECD_03283 0.67 -1.9
3,433,822 - ECD_03283 0.67 -0.0
3,433,941 + ECD_03283 0.73 -1.3
3,433,941 + ECD_03283 0.73 +0.4
3,433,942 - ECD_03283 0.73 -0.2
3,433,942 - ECD_03283 0.73 +0.2
3,433,943 + ECD_03283 0.73 +0.5
3,433,944 - ECD_03283 0.73 +0.0
3,433,944 - ECD_03283 0.73 +0.2
3,433,944 - ECD_03283 0.73 -0.7
3,433,944 - ECD_03283 0.73 -0.8
3,433,982 + ECD_03283 0.75 +0.6
3,433,982 + ECD_03283 0.75 -0.1
3,433,983 - ECD_03283 0.75 +0.4
3,434,010 - ECD_03283 0.77 +0.4
3,434,010 - ECD_03283 0.77 +0.3
3,434,010 - ECD_03283 0.77 +1.4
3,434,010 - ECD_03283 0.77 +1.3
3,434,010 - ECD_03283 0.77 -0.5
3,434,063 + ECD_03283 0.79 +1.5
3,434,063 + ECD_03283 0.79 -0.0
3,434,064 - ECD_03283 0.79 +0.8
3,434,128 - ECD_03283 0.83 +0.0
3,434,128 - ECD_03283 0.83 -0.5
3,434,128 - ECD_03283 0.83 -0.4
3,434,292 - -2.5
3,434,292 - +0.1
3,434,424 - +0.9
3,434,424 - +0.3
3,434,492 + +0.8
3,434,493 - +2.5
3,434,563 - +1.4
3,434,586 - +0.7
3,434,586 - +1.6
3,434,596 + +0.1
3,434,597 - +2.6
3,434,612 + -1.4
3,434,659 + +0.5
3,434,688 - ECD_03284 0.10 +1.1
3,434,813 + ECD_03284 0.16 -0.0
3,434,813 + ECD_03284 0.16 +0.7
3,434,824 + ECD_03284 0.16 +1.1
3,434,825 - ECD_03284 0.16 +1.0
3,434,959 - ECD_03284 0.23 +0.7
3,434,959 - ECD_03284 0.23 -0.2
3,434,959 - ECD_03284 0.23 +0.8
3,434,992 + ECD_03284 0.24 +0.7
3,434,992 + ECD_03284 0.24 +0.8
3,434,993 - ECD_03284 0.24 +0.7
3,434,995 + ECD_03284 0.24 -0.9
3,434,995 + ECD_03284 0.24 +0.8
3,434,995 + ECD_03284 0.24 +0.5
3,434,996 - ECD_03284 0.24 +0.9
3,434,996 - ECD_03284 0.24 +1.5
3,435,109 + ECD_03284 0.29 +0.6
3,435,109 + ECD_03284 0.29 +0.1
3,435,110 - ECD_03284 0.29 +4.9
3,435,110 - ECD_03284 0.29 +0.7
3,435,148 + ECD_03284 0.31 +0.1
3,435,157 + ECD_03284 0.32 -0.2
3,435,178 + ECD_03284 0.33 -0.2
3,435,178 + ECD_03284 0.33 +0.8
3,435,178 + ECD_03284 0.33 -0.7
3,435,178 + ECD_03284 0.33 +0.5
3,435,179 - ECD_03284 0.33 +0.8
3,435,179 - ECD_03284 0.33 +0.7
3,435,179 - ECD_03284 0.33 +0.1
3,435,217 + ECD_03284 0.34 +0.6
3,435,218 - ECD_03284 0.34 +0.7
3,435,320 + ECD_03284 0.39 -0.9
3,435,321 - ECD_03284 0.39 +1.2
3,435,330 - ECD_03284 0.40 +1.7
3,435,330 - ECD_03284 0.40 -1.0
3,435,333 - ECD_03284 0.40 +2.0
3,435,333 - ECD_03284 0.40 -0.1
3,435,333 - ECD_03284 0.40 +0.9
3,435,409 + ECD_03284 0.43 +1.6
3,435,459 - ECD_03284 0.45 +0.8
3,435,478 + ECD_03284 0.46 -1.3
3,435,523 + ECD_03284 0.48 +1.6
3,435,523 + ECD_03284 0.48 -0.0
3,435,523 + ECD_03284 0.48 -1.6
3,435,523 + ECD_03284 0.48 -0.4
3,435,523 + ECD_03284 0.48 +0.5
3,435,523 + ECD_03284 0.48 +0.2
3,435,523 + ECD_03284 0.48 -0.1
3,435,523 + ECD_03284 0.48 +1.0
3,435,524 - ECD_03284 0.48 -1.1
3,435,524 - ECD_03284 0.48 +0.5
3,435,524 - ECD_03284 0.48 -0.5
3,435,524 - ECD_03284 0.48 -2.1
3,435,524 - ECD_03284 0.48 +0.4
3,435,524 - ECD_03284 0.48 +0.0
3,435,524 - ECD_03284 0.48 +2.5
3,435,530 - ECD_03284 0.49 -0.4
3,435,530 - ECD_03284 0.49 -0.2
3,435,530 - ECD_03284 0.49 +0.2
3,435,583 + ECD_03284 0.51 +1.2
3,435,695 - ECD_03284 0.56 -2.2
3,435,736 + ECD_03284 0.58 +0.2
3,435,737 - ECD_03284 0.58 +2.3
3,435,796 - ECD_03284 0.61 +0.9
3,435,825 - ECD_03284 0.62 +0.0
3,435,830 - ECD_03284 0.62 -0.2
3,435,830 - ECD_03284 0.62 +0.0
3,435,917 - ECD_03284 0.66 -0.5
3,435,917 - ECD_03284 0.66 -0.1
3,435,920 + ECD_03284 0.66 +1.0
3,435,921 - ECD_03284 0.67 -0.2
3,435,969 + ECD_03284 0.69 +0.3
3,435,970 - ECD_03284 0.69 +1.0
3,435,996 - ECD_03284 0.70 -1.7
3,436,085 - ECD_03284 0.74 +0.7
3,436,085 - ECD_03284 0.74 +0.9
3,436,089 - ECD_03284 0.74 +0.3
3,436,089 - ECD_03284 0.74 +0.7
3,436,104 - ECD_03284 0.75 -1.0
3,436,260 - ECD_03284 0.82 +0.5
3,436,262 + ECD_03284 0.82 +0.2
3,436,262 + ECD_03284 0.82 -0.6
3,436,262 + ECD_03284 0.82 +1.2
3,436,263 - ECD_03284 0.82 -0.7
3,436,263 - ECD_03284 0.82 +0.2
3,436,263 - ECD_03284 0.82 -0.5
3,436,263 - ECD_03284 0.82 -0.1
3,436,263 - ECD_03284 0.82 -1.1
3,436,263 - ECD_03284 0.82 -0.3
3,436,263 - ECD_03284 0.82 +0.3
3,436,263 - ECD_03284 0.82 -0.7
3,436,305 - ECD_03284 0.84 -0.2
3,436,305 - ECD_03284 0.84 -0.7
3,436,318 - ECD_03284 0.85 +0.7
3,436,318 - ECD_03284 0.85 +0.5
3,436,568 + -0.1
3,436,569 - -1.8
3,436,669 + -0.3
3,436,778 - -1.2
3,436,789 + +0.8
3,436,790 - +1.5
3,436,790 - +0.3
3,436,797 + +1.9
3,436,798 - +0.1
3,436,798 - +0.0
3,436,866 + -0.5
3,436,866 + +0.2
3,436,867 - -0.0
3,436,874 + +0.1
3,436,874 + -0.1
3,436,875 - -0.2
3,436,875 - +0.1
3,436,877 + -0.6
3,436,885 - +0.1
3,436,913 - -0.4
3,436,919 + +1.0
3,436,926 + -0.5
3,436,926 + +0.5

Or see this region's nucleotide sequence