Strain Fitness in Escherichia coli BL21 around ECD_02747

Experiment: EV116

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02745 and ECD_02746 are separated by 55 nucleotidesECD_02746 and ECD_02747 are separated by 141 nucleotidesECD_02747 and ECD_02748 are separated by 203 nucleotides ECD_02745: ECD_02745 - ribose 5-phosphate isomerase, constitutive, at 2,889,524 to 2,890,183 _02745 ECD_02746: ECD_02746 - hypothetical protein, at 2,890,239 to 2,890,469 _02746 ECD_02747: ECD_02747 - transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor, at 2,890,611 to 2,891,504 _02747 ECD_02748: ECD_02748 - methylmalonyl-CoA mutase, at 2,891,708 to 2,893,852 _02748 Position (kb) 2890 2891 2892Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2890.221 kb on - strandat 2890.221 kb on - strandat 2890.221 kb on - strandat 2890.221 kb on - strandat 2890.221 kb on - strandat 2890.221 kb on - strandat 2890.221 kb on - strandat 2890.222 kb on + strandat 2890.223 kb on - strandat 2890.320 kb on + strand, within ECD_02746at 2890.321 kb on - strand, within ECD_02746at 2890.342 kb on - strand, within ECD_02746at 2890.504 kb on + strandat 2890.514 kb on + strandat 2890.514 kb on + strandat 2890.514 kb on + strandat 2890.515 kb on - strandat 2890.515 kb on - strandat 2890.543 kb on - strandat 2890.544 kb on + strandat 2890.544 kb on + strandat 2890.544 kb on + strandat 2890.544 kb on + strandat 2890.544 kb on + strandat 2890.544 kb on + strandat 2890.544 kb on + strandat 2890.544 kb on + strandat 2890.544 kb on + strandat 2890.545 kb on - strandat 2890.590 kb on + strandat 2890.590 kb on + strandat 2890.590 kb on + strandat 2890.590 kb on + strandat 2890.591 kb on - strandat 2890.591 kb on - strandat 2890.626 kb on + strandat 2890.627 kb on - strandat 2890.637 kb on - strandat 2890.700 kb on + strandat 2890.700 kb on + strandat 2890.700 kb on + strandat 2890.700 kb on + strandat 2890.727 kb on + strand, within ECD_02747at 2890.727 kb on + strand, within ECD_02747at 2890.985 kb on - strand, within ECD_02747at 2891.045 kb on + strand, within ECD_02747at 2891.046 kb on - strand, within ECD_02747at 2891.208 kb on - strand, within ECD_02747at 2891.274 kb on - strand, within ECD_02747at 2891.274 kb on - strand, within ECD_02747at 2891.324 kb on + strand, within ECD_02747at 2891.324 kb on + strand, within ECD_02747at 2891.325 kb on - strand, within ECD_02747at 2891.325 kb on - strand, within ECD_02747at 2891.325 kb on - strand, within ECD_02747at 2891.325 kb on - strand, within ECD_02747at 2891.380 kb on + strand, within ECD_02747at 2891.392 kb on + strand, within ECD_02747at 2891.392 kb on + strand, within ECD_02747at 2891.476 kb on - strandat 2891.502 kb on + strandat 2891.514 kb on + strandat 2891.515 kb on - strandat 2891.524 kb on + strandat 2891.532 kb on - strandat 2891.650 kb on - strandat 2891.674 kb on - strandat 2891.706 kb on + strandat 2891.707 kb on - strandat 2891.707 kb on - strandat 2891.713 kb on + strandat 2891.822 kb on + strandat 2891.823 kb on - strandat 2891.823 kb on - strandat 2891.860 kb on + strandat 2891.860 kb on + strandat 2891.905 kb on + strandat 2891.905 kb on + strandat 2891.905 kb on + strandat 2891.905 kb on + strandat 2891.905 kb on + strandat 2891.905 kb on + strandat 2891.906 kb on - strandat 2891.906 kb on - strandat 2891.906 kb on - strandat 2891.906 kb on - strandat 2891.906 kb on - strandat 2891.906 kb on - strandat 2891.906 kb on - strandat 2891.909 kb on + strandat 2891.909 kb on + strandat 2891.909 kb on + strandat 2891.909 kb on + strandat 2891.909 kb on + strandat 2891.909 kb on + strandat 2891.909 kb on + strandat 2891.909 kb on + strandat 2891.909 kb on + strandat 2891.910 kb on - strandat 2891.910 kb on - strandat 2891.910 kb on - strandat 2891.910 kb on - strandat 2891.910 kb on - strandat 2891.912 kb on - strandat 2891.939 kb on + strand, within ECD_02748at 2891.940 kb on - strand, within ECD_02748at 2891.940 kb on - strand, within ECD_02748at 2892.118 kb on + strand, within ECD_02748at 2892.119 kb on - strand, within ECD_02748at 2892.206 kb on + strand, within ECD_02748at 2892.207 kb on - strand, within ECD_02748at 2892.236 kb on - strand, within ECD_02748at 2892.236 kb on - strand, within ECD_02748at 2892.236 kb on - strand, within ECD_02748at 2892.236 kb on - strand, within ECD_02748at 2892.272 kb on - strand, within ECD_02748at 2892.285 kb on - strand, within ECD_02748at 2892.285 kb on - strand, within ECD_02748at 2892.302 kb on + strand, within ECD_02748at 2892.302 kb on + strand, within ECD_02748at 2892.302 kb on + strand, within ECD_02748at 2892.302 kb on + strand, within ECD_02748at 2892.302 kb on + strand, within ECD_02748at 2892.302 kb on + strand, within ECD_02748at 2892.302 kb on + strand, within ECD_02748at 2892.303 kb on - strand, within ECD_02748at 2892.303 kb on - strand, within ECD_02748at 2892.303 kb on - strand, within ECD_02748at 2892.303 kb on - strand, within ECD_02748at 2892.303 kb on - strand, within ECD_02748at 2892.303 kb on - strand, within ECD_02748at 2892.303 kb on - strand, within ECD_02748at 2892.303 kb on - strand, within ECD_02748at 2892.304 kb on + strand, within ECD_02748at 2892.304 kb on + strand, within ECD_02748at 2892.304 kb on + strand, within ECD_02748at 2892.305 kb on - strand, within ECD_02748at 2892.305 kb on - strand, within ECD_02748at 2892.308 kb on + strand, within ECD_02748at 2892.308 kb on + strand, within ECD_02748at 2892.335 kb on - strand, within ECD_02748at 2892.379 kb on + strand, within ECD_02748at 2892.380 kb on - strand, within ECD_02748at 2892.380 kb on - strand, within ECD_02748at 2892.382 kb on + strand, within ECD_02748at 2892.383 kb on - strand, within ECD_02748at 2892.383 kb on - strand, within ECD_02748at 2892.392 kb on - strand, within ECD_02748at 2892.392 kb on - strand, within ECD_02748at 2892.441 kb on + strand, within ECD_02748at 2892.442 kb on - strand, within ECD_02748at 2892.470 kb on + strand, within ECD_02748at 2892.470 kb on + strand, within ECD_02748at 2892.470 kb on + strand, within ECD_02748at 2892.470 kb on + strand, within ECD_02748at 2892.470 kb on + strand, within ECD_02748at 2892.470 kb on + strand, within ECD_02748at 2892.470 kb on + strand, within ECD_02748at 2892.471 kb on - strand, within ECD_02748at 2892.471 kb on - strand, within ECD_02748at 2892.471 kb on - strand, within ECD_02748

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Per-strain Table

Position Strand Gene LocusTag Fraction EV116
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2,890,221 - +1.3
2,890,221 - -1.8
2,890,221 - +2.1
2,890,221 - -0.9
2,890,221 - +2.2
2,890,221 - -0.3
2,890,221 - -0.0
2,890,222 + -0.7
2,890,223 - -1.7
2,890,320 + ECD_02746 0.35 -0.1
2,890,321 - ECD_02746 0.35 +1.3
2,890,342 - ECD_02746 0.45 +0.0
2,890,504 + +0.7
2,890,514 + -0.7
2,890,514 + -0.0
2,890,514 + -0.7
2,890,515 - -0.9
2,890,515 - -0.1
2,890,543 - -2.0
2,890,544 + -1.0
2,890,544 + +0.1
2,890,544 + -0.1
2,890,544 + +1.3
2,890,544 + -0.4
2,890,544 + -1.2
2,890,544 + +0.4
2,890,544 + +0.3
2,890,544 + +0.3
2,890,545 - +0.4
2,890,590 + +0.3
2,890,590 + +0.7
2,890,590 + +0.7
2,890,590 + +0.2
2,890,591 - +1.2
2,890,591 - +2.4
2,890,626 + +3.1
2,890,627 - +1.4
2,890,637 - +1.7
2,890,700 + +1.7
2,890,700 + +1.7
2,890,700 + +1.8
2,890,700 + +3.1
2,890,727 + ECD_02747 0.13 +1.2
2,890,727 + ECD_02747 0.13 +1.8
2,890,985 - ECD_02747 0.42 +0.8
2,891,045 + ECD_02747 0.49 +0.5
2,891,046 - ECD_02747 0.49 +0.8
2,891,208 - ECD_02747 0.67 +2.9
2,891,274 - ECD_02747 0.74 +2.7
2,891,274 - ECD_02747 0.74 +0.2
2,891,324 + ECD_02747 0.80 -0.6
2,891,324 + ECD_02747 0.80 +0.6
2,891,325 - ECD_02747 0.80 +3.5
2,891,325 - ECD_02747 0.80 +1.9
2,891,325 - ECD_02747 0.80 +1.9
2,891,325 - ECD_02747 0.80 +1.2
2,891,380 + ECD_02747 0.86 +1.9
2,891,392 + ECD_02747 0.87 +1.2
2,891,392 + ECD_02747 0.87 +2.5
2,891,476 - +0.8
2,891,502 + -0.6
2,891,514 + +0.6
2,891,515 - +0.8
2,891,524 + -1.5
2,891,532 - -2.9
2,891,650 - +1.3
2,891,674 - +0.4
2,891,706 + -0.1
2,891,707 - +4.0
2,891,707 - +0.4
2,891,713 + +0.6
2,891,822 + -0.5
2,891,823 - -1.2
2,891,823 - -0.9
2,891,860 + +0.7
2,891,860 + -0.5
2,891,905 + -0.6
2,891,905 + -0.4
2,891,905 + -0.1
2,891,905 + +0.5
2,891,905 + +0.2
2,891,905 + -0.1
2,891,906 - -1.5
2,891,906 - -0.6
2,891,906 - +0.4
2,891,906 - +0.1
2,891,906 - +0.3
2,891,906 - +1.1
2,891,906 - +0.1
2,891,909 + -0.4
2,891,909 + -0.9
2,891,909 + +0.2
2,891,909 + -1.1
2,891,909 + +1.2
2,891,909 + +0.9
2,891,909 + -0.1
2,891,909 + +0.2
2,891,909 + -0.7
2,891,910 - +0.2
2,891,910 - -1.8
2,891,910 - -0.2
2,891,910 - -0.3
2,891,910 - +1.3
2,891,912 - +0.5
2,891,939 + ECD_02748 0.11 -0.1
2,891,940 - ECD_02748 0.11 -0.2
2,891,940 - ECD_02748 0.11 +1.0
2,892,118 + ECD_02748 0.19 +0.2
2,892,119 - ECD_02748 0.19 +0.3
2,892,206 + ECD_02748 0.23 -1.5
2,892,207 - ECD_02748 0.23 -0.6
2,892,236 - ECD_02748 0.25 -0.6
2,892,236 - ECD_02748 0.25 +0.5
2,892,236 - ECD_02748 0.25 -1.0
2,892,236 - ECD_02748 0.25 -0.4
2,892,272 - ECD_02748 0.26 +0.2
2,892,285 - ECD_02748 0.27 -0.4
2,892,285 - ECD_02748 0.27 +0.0
2,892,302 + ECD_02748 0.28 -2.3
2,892,302 + ECD_02748 0.28 +0.6
2,892,302 + ECD_02748 0.28 -0.8
2,892,302 + ECD_02748 0.28 -1.6
2,892,302 + ECD_02748 0.28 -2.5
2,892,302 + ECD_02748 0.28 -1.0
2,892,302 + ECD_02748 0.28 -0.3
2,892,303 - ECD_02748 0.28 +0.2
2,892,303 - ECD_02748 0.28 -1.5
2,892,303 - ECD_02748 0.28 +0.2
2,892,303 - ECD_02748 0.28 +0.1
2,892,303 - ECD_02748 0.28 +2.0
2,892,303 - ECD_02748 0.28 +1.4
2,892,303 - ECD_02748 0.28 -0.5
2,892,303 - ECD_02748 0.28 -1.0
2,892,304 + ECD_02748 0.28 -0.4
2,892,304 + ECD_02748 0.28 +0.3
2,892,304 + ECD_02748 0.28 +0.9
2,892,305 - ECD_02748 0.28 +0.4
2,892,305 - ECD_02748 0.28 -0.4
2,892,308 + ECD_02748 0.28 -0.6
2,892,308 + ECD_02748 0.28 -0.6
2,892,335 - ECD_02748 0.29 +0.2
2,892,379 + ECD_02748 0.31 -1.1
2,892,380 - ECD_02748 0.31 +1.3
2,892,380 - ECD_02748 0.31 -0.2
2,892,382 + ECD_02748 0.31 -0.3
2,892,383 - ECD_02748 0.31 +0.2
2,892,383 - ECD_02748 0.31 +1.4
2,892,392 - ECD_02748 0.32 +0.2
2,892,392 - ECD_02748 0.32 +0.2
2,892,441 + ECD_02748 0.34 -0.4
2,892,442 - ECD_02748 0.34 +0.5
2,892,470 + ECD_02748 0.36 -1.7
2,892,470 + ECD_02748 0.36 +0.0
2,892,470 + ECD_02748 0.36 -0.4
2,892,470 + ECD_02748 0.36 -0.3
2,892,470 + ECD_02748 0.36 -1.9
2,892,470 + ECD_02748 0.36 -0.4
2,892,470 + ECD_02748 0.36 +0.9
2,892,471 - ECD_02748 0.36 +1.3
2,892,471 - ECD_02748 0.36 +1.2
2,892,471 - ECD_02748 0.36 -1.4

Or see this region's nucleotide sequence