Experiment: EV116
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02745 and ECD_02746 are separated by 55 nucleotides ECD_02746 and ECD_02747 are separated by 141 nucleotides ECD_02747 and ECD_02748 are separated by 203 nucleotides
ECD_02745: ECD_02745 - ribose 5-phosphate isomerase, constitutive, at 2,889,524 to 2,890,183
_02745
ECD_02746: ECD_02746 - hypothetical protein, at 2,890,239 to 2,890,469
_02746
ECD_02747: ECD_02747 - transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor, at 2,890,611 to 2,891,504
_02747
ECD_02748: ECD_02748 - methylmalonyl-CoA mutase, at 2,891,708 to 2,893,852
_02748
Position (kb)
2890
2891
2892 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2890.221 kb on - strand at 2890.221 kb on - strand at 2890.221 kb on - strand at 2890.221 kb on - strand at 2890.221 kb on - strand at 2890.221 kb on - strand at 2890.221 kb on - strand at 2890.222 kb on + strand at 2890.223 kb on - strand at 2890.320 kb on + strand, within ECD_02746 at 2890.321 kb on - strand, within ECD_02746 at 2890.342 kb on - strand, within ECD_02746 at 2890.504 kb on + strand at 2890.514 kb on + strand at 2890.514 kb on + strand at 2890.514 kb on + strand at 2890.515 kb on - strand at 2890.515 kb on - strand at 2890.543 kb on - strand at 2890.544 kb on + strand at 2890.544 kb on + strand at 2890.544 kb on + strand at 2890.544 kb on + strand at 2890.544 kb on + strand at 2890.544 kb on + strand at 2890.544 kb on + strand at 2890.544 kb on + strand at 2890.544 kb on + strand at 2890.545 kb on - strand at 2890.590 kb on + strand at 2890.590 kb on + strand at 2890.590 kb on + strand at 2890.590 kb on + strand at 2890.591 kb on - strand at 2890.591 kb on - strand at 2890.626 kb on + strand at 2890.627 kb on - strand at 2890.637 kb on - strand at 2890.700 kb on + strand at 2890.700 kb on + strand at 2890.700 kb on + strand at 2890.700 kb on + strand at 2890.727 kb on + strand, within ECD_02747 at 2890.727 kb on + strand, within ECD_02747 at 2890.985 kb on - strand, within ECD_02747 at 2891.045 kb on + strand, within ECD_02747 at 2891.046 kb on - strand, within ECD_02747 at 2891.208 kb on - strand, within ECD_02747 at 2891.274 kb on - strand, within ECD_02747 at 2891.274 kb on - strand, within ECD_02747 at 2891.324 kb on + strand, within ECD_02747 at 2891.324 kb on + strand, within ECD_02747 at 2891.325 kb on - strand, within ECD_02747 at 2891.325 kb on - strand, within ECD_02747 at 2891.325 kb on - strand, within ECD_02747 at 2891.325 kb on - strand, within ECD_02747 at 2891.380 kb on + strand, within ECD_02747 at 2891.392 kb on + strand, within ECD_02747 at 2891.392 kb on + strand, within ECD_02747 at 2891.476 kb on - strand at 2891.502 kb on + strand at 2891.514 kb on + strand at 2891.515 kb on - strand at 2891.524 kb on + strand at 2891.532 kb on - strand at 2891.650 kb on - strand at 2891.674 kb on - strand at 2891.706 kb on + strand at 2891.707 kb on - strand at 2891.707 kb on - strand at 2891.713 kb on + strand at 2891.822 kb on + strand at 2891.823 kb on - strand at 2891.823 kb on - strand at 2891.860 kb on + strand at 2891.860 kb on + strand at 2891.905 kb on + strand at 2891.905 kb on + strand at 2891.905 kb on + strand at 2891.905 kb on + strand at 2891.905 kb on + strand at 2891.905 kb on + strand at 2891.906 kb on - strand at 2891.906 kb on - strand at 2891.906 kb on - strand at 2891.906 kb on - strand at 2891.906 kb on - strand at 2891.906 kb on - strand at 2891.906 kb on - strand at 2891.909 kb on + strand at 2891.909 kb on + strand at 2891.909 kb on + strand at 2891.909 kb on + strand at 2891.909 kb on + strand at 2891.909 kb on + strand at 2891.909 kb on + strand at 2891.909 kb on + strand at 2891.909 kb on + strand at 2891.910 kb on - strand at 2891.910 kb on - strand at 2891.910 kb on - strand at 2891.910 kb on - strand at 2891.910 kb on - strand at 2891.912 kb on - strand at 2891.939 kb on + strand, within ECD_02748 at 2891.940 kb on - strand, within ECD_02748 at 2891.940 kb on - strand, within ECD_02748 at 2892.118 kb on + strand, within ECD_02748 at 2892.119 kb on - strand, within ECD_02748 at 2892.206 kb on + strand, within ECD_02748 at 2892.207 kb on - strand, within ECD_02748 at 2892.236 kb on - strand, within ECD_02748 at 2892.236 kb on - strand, within ECD_02748 at 2892.236 kb on - strand, within ECD_02748 at 2892.236 kb on - strand, within ECD_02748 at 2892.272 kb on - strand, within ECD_02748 at 2892.285 kb on - strand, within ECD_02748 at 2892.285 kb on - strand, within ECD_02748 at 2892.302 kb on + strand, within ECD_02748 at 2892.302 kb on + strand, within ECD_02748 at 2892.302 kb on + strand, within ECD_02748 at 2892.302 kb on + strand, within ECD_02748 at 2892.302 kb on + strand, within ECD_02748 at 2892.302 kb on + strand, within ECD_02748 at 2892.302 kb on + strand, within ECD_02748 at 2892.303 kb on - strand, within ECD_02748 at 2892.303 kb on - strand, within ECD_02748 at 2892.303 kb on - strand, within ECD_02748 at 2892.303 kb on - strand, within ECD_02748 at 2892.303 kb on - strand, within ECD_02748 at 2892.303 kb on - strand, within ECD_02748 at 2892.303 kb on - strand, within ECD_02748 at 2892.303 kb on - strand, within ECD_02748 at 2892.304 kb on + strand, within ECD_02748 at 2892.304 kb on + strand, within ECD_02748 at 2892.304 kb on + strand, within ECD_02748 at 2892.305 kb on - strand, within ECD_02748 at 2892.305 kb on - strand, within ECD_02748 at 2892.308 kb on + strand, within ECD_02748 at 2892.308 kb on + strand, within ECD_02748 at 2892.335 kb on - strand, within ECD_02748 at 2892.379 kb on + strand, within ECD_02748 at 2892.380 kb on - strand, within ECD_02748 at 2892.380 kb on - strand, within ECD_02748 at 2892.382 kb on + strand, within ECD_02748 at 2892.383 kb on - strand, within ECD_02748 at 2892.383 kb on - strand, within ECD_02748 at 2892.392 kb on - strand, within ECD_02748 at 2892.392 kb on - strand, within ECD_02748 at 2892.441 kb on + strand, within ECD_02748 at 2892.442 kb on - strand, within ECD_02748 at 2892.470 kb on + strand, within ECD_02748 at 2892.470 kb on + strand, within ECD_02748 at 2892.470 kb on + strand, within ECD_02748 at 2892.470 kb on + strand, within ECD_02748 at 2892.470 kb on + strand, within ECD_02748 at 2892.470 kb on + strand, within ECD_02748 at 2892.470 kb on + strand, within ECD_02748 at 2892.471 kb on - strand, within ECD_02748 at 2892.471 kb on - strand, within ECD_02748 at 2892.471 kb on - strand, within ECD_02748
Per-strain Table
Position Strand Gene LocusTag Fraction EV116 remove 2,890,221 - +1.3 2,890,221 - -1.8 2,890,221 - +2.1 2,890,221 - -0.9 2,890,221 - +2.2 2,890,221 - -0.3 2,890,221 - -0.0 2,890,222 + -0.7 2,890,223 - -1.7 2,890,320 + ECD_02746 0.35 -0.1 2,890,321 - ECD_02746 0.35 +1.3 2,890,342 - ECD_02746 0.45 +0.0 2,890,504 + +0.7 2,890,514 + -0.7 2,890,514 + -0.0 2,890,514 + -0.7 2,890,515 - -0.9 2,890,515 - -0.1 2,890,543 - -2.0 2,890,544 + -1.0 2,890,544 + +0.1 2,890,544 + -0.1 2,890,544 + +1.3 2,890,544 + -0.4 2,890,544 + -1.2 2,890,544 + +0.4 2,890,544 + +0.3 2,890,544 + +0.3 2,890,545 - +0.4 2,890,590 + +0.3 2,890,590 + +0.7 2,890,590 + +0.7 2,890,590 + +0.2 2,890,591 - +1.2 2,890,591 - +2.4 2,890,626 + +3.1 2,890,627 - +1.4 2,890,637 - +1.7 2,890,700 + +1.7 2,890,700 + +1.7 2,890,700 + +1.8 2,890,700 + +3.1 2,890,727 + ECD_02747 0.13 +1.2 2,890,727 + ECD_02747 0.13 +1.8 2,890,985 - ECD_02747 0.42 +0.8 2,891,045 + ECD_02747 0.49 +0.5 2,891,046 - ECD_02747 0.49 +0.8 2,891,208 - ECD_02747 0.67 +2.9 2,891,274 - ECD_02747 0.74 +2.7 2,891,274 - ECD_02747 0.74 +0.2 2,891,324 + ECD_02747 0.80 -0.6 2,891,324 + ECD_02747 0.80 +0.6 2,891,325 - ECD_02747 0.80 +3.5 2,891,325 - ECD_02747 0.80 +1.9 2,891,325 - ECD_02747 0.80 +1.9 2,891,325 - ECD_02747 0.80 +1.2 2,891,380 + ECD_02747 0.86 +1.9 2,891,392 + ECD_02747 0.87 +1.2 2,891,392 + ECD_02747 0.87 +2.5 2,891,476 - +0.8 2,891,502 + -0.6 2,891,514 + +0.6 2,891,515 - +0.8 2,891,524 + -1.5 2,891,532 - -2.9 2,891,650 - +1.3 2,891,674 - +0.4 2,891,706 + -0.1 2,891,707 - +4.0 2,891,707 - +0.4 2,891,713 + +0.6 2,891,822 + -0.5 2,891,823 - -1.2 2,891,823 - -0.9 2,891,860 + +0.7 2,891,860 + -0.5 2,891,905 + -0.6 2,891,905 + -0.4 2,891,905 + -0.1 2,891,905 + +0.5 2,891,905 + +0.2 2,891,905 + -0.1 2,891,906 - -1.5 2,891,906 - -0.6 2,891,906 - +0.4 2,891,906 - +0.1 2,891,906 - +0.3 2,891,906 - +1.1 2,891,906 - +0.1 2,891,909 + -0.4 2,891,909 + -0.9 2,891,909 + +0.2 2,891,909 + -1.1 2,891,909 + +1.2 2,891,909 + +0.9 2,891,909 + -0.1 2,891,909 + +0.2 2,891,909 + -0.7 2,891,910 - +0.2 2,891,910 - -1.8 2,891,910 - -0.2 2,891,910 - -0.3 2,891,910 - +1.3 2,891,912 - +0.5 2,891,939 + ECD_02748 0.11 -0.1 2,891,940 - ECD_02748 0.11 -0.2 2,891,940 - ECD_02748 0.11 +1.0 2,892,118 + ECD_02748 0.19 +0.2 2,892,119 - ECD_02748 0.19 +0.3 2,892,206 + ECD_02748 0.23 -1.5 2,892,207 - ECD_02748 0.23 -0.6 2,892,236 - ECD_02748 0.25 -0.6 2,892,236 - ECD_02748 0.25 +0.5 2,892,236 - ECD_02748 0.25 -1.0 2,892,236 - ECD_02748 0.25 -0.4 2,892,272 - ECD_02748 0.26 +0.2 2,892,285 - ECD_02748 0.27 -0.4 2,892,285 - ECD_02748 0.27 +0.0 2,892,302 + ECD_02748 0.28 -2.3 2,892,302 + ECD_02748 0.28 +0.6 2,892,302 + ECD_02748 0.28 -0.8 2,892,302 + ECD_02748 0.28 -1.6 2,892,302 + ECD_02748 0.28 -2.5 2,892,302 + ECD_02748 0.28 -1.0 2,892,302 + ECD_02748 0.28 -0.3 2,892,303 - ECD_02748 0.28 +0.2 2,892,303 - ECD_02748 0.28 -1.5 2,892,303 - ECD_02748 0.28 +0.2 2,892,303 - ECD_02748 0.28 +0.1 2,892,303 - ECD_02748 0.28 +2.0 2,892,303 - ECD_02748 0.28 +1.4 2,892,303 - ECD_02748 0.28 -0.5 2,892,303 - ECD_02748 0.28 -1.0 2,892,304 + ECD_02748 0.28 -0.4 2,892,304 + ECD_02748 0.28 +0.3 2,892,304 + ECD_02748 0.28 +0.9 2,892,305 - ECD_02748 0.28 +0.4 2,892,305 - ECD_02748 0.28 -0.4 2,892,308 + ECD_02748 0.28 -0.6 2,892,308 + ECD_02748 0.28 -0.6 2,892,335 - ECD_02748 0.29 +0.2 2,892,379 + ECD_02748 0.31 -1.1 2,892,380 - ECD_02748 0.31 +1.3 2,892,380 - ECD_02748 0.31 -0.2 2,892,382 + ECD_02748 0.31 -0.3 2,892,383 - ECD_02748 0.31 +0.2 2,892,383 - ECD_02748 0.31 +1.4 2,892,392 - ECD_02748 0.32 +0.2 2,892,392 - ECD_02748 0.32 +0.2 2,892,441 + ECD_02748 0.34 -0.4 2,892,442 - ECD_02748 0.34 +0.5 2,892,470 + ECD_02748 0.36 -1.7 2,892,470 + ECD_02748 0.36 +0.0 2,892,470 + ECD_02748 0.36 -0.4 2,892,470 + ECD_02748 0.36 -0.3 2,892,470 + ECD_02748 0.36 -1.9 2,892,470 + ECD_02748 0.36 -0.4 2,892,470 + ECD_02748 0.36 +0.9 2,892,471 - ECD_02748 0.36 +1.3 2,892,471 - ECD_02748 0.36 +1.2 2,892,471 - ECD_02748 0.36 -1.4
Or see this region's nucleotide sequence