Strain Fitness in Escherichia coli BL21 around ECD_02697

Experiment: EV116

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02695 and ECD_02696 are separated by 56 nucleotidesECD_02696 and ECD_02697 are separated by 13 nucleotidesECD_02697 and ECD_t00054 are separated by 237 nucleotidesECD_t00054 and ECD_02698 are separated by 78 nucleotides ECD_02695: ECD_02695 - putative transposase-related protein, at 2,827,872 to 2,828,180 _02695 ECD_02696: ECD_02696 - putative transposase for IS3, at 2,828,237 to 2,829,043 _02696 ECD_02697: ECD_02697 - hypothetical protein, at 2,829,057 to 2,829,608 _02697 ECD_t00054: ECD_t00054 - tRNA-Gly, at 2,829,846 to 2,829,919 _t00054 ECD_02698: ECD_02698 - LysM domain-containing M23 family putative peptidase; septation lipoprotein, at 2,829,998 to 2,830,753 _02698 Position (kb) 2829 2830Strain fitness (log2 ratio) -2 -1 0 1 2at 2829.058 kb on + strandat 2829.058 kb on + strandat 2829.143 kb on + strand, within ECD_02697at 2829.143 kb on + strand, within ECD_02697at 2829.143 kb on + strand, within ECD_02697at 2829.144 kb on - strand, within ECD_02697at 2829.144 kb on - strand, within ECD_02697at 2829.144 kb on - strand, within ECD_02697at 2829.144 kb on - strand, within ECD_02697at 2829.144 kb on - strand, within ECD_02697at 2829.144 kb on - strand, within ECD_02697at 2829.145 kb on + strand, within ECD_02697at 2829.201 kb on + strand, within ECD_02697at 2829.205 kb on - strand, within ECD_02697at 2829.205 kb on - strand, within ECD_02697at 2829.214 kb on + strand, within ECD_02697at 2829.214 kb on + strand, within ECD_02697at 2829.214 kb on + strand, within ECD_02697at 2829.215 kb on - strand, within ECD_02697at 2829.215 kb on - strand, within ECD_02697at 2829.228 kb on - strand, within ECD_02697at 2829.384 kb on - strand, within ECD_02697at 2829.386 kb on - strand, within ECD_02697at 2829.568 kb on - strandat 2829.589 kb on - strandat 2829.656 kb on + strandat 2829.876 kb on - strand, within ECD_t00054at 2829.876 kb on - strand, within ECD_t00054at 2829.878 kb on - strand, within ECD_t00054at 2829.878 kb on - strand, within ECD_t00054at 2829.878 kb on - strand, within ECD_t00054at 2829.901 kb on - strand, within ECD_t00054at 2829.901 kb on - strand, within ECD_t00054at 2829.912 kb on - strandat 2829.912 kb on - strandat 2829.912 kb on - strandat 2829.948 kb on + strandat 2829.948 kb on + strandat 2830.032 kb on + strandat 2830.032 kb on + strandat 2830.032 kb on + strandat 2830.032 kb on + strandat 2830.032 kb on + strandat 2830.033 kb on - strandat 2830.151 kb on - strand, within ECD_02698at 2830.151 kb on - strand, within ECD_02698at 2830.154 kb on + strand, within ECD_02698at 2830.180 kb on - strand, within ECD_02698at 2830.180 kb on - strand, within ECD_02698at 2830.186 kb on + strand, within ECD_02698at 2830.187 kb on - strand, within ECD_02698at 2830.191 kb on + strand, within ECD_02698at 2830.191 kb on + strand, within ECD_02698at 2830.191 kb on + strand, within ECD_02698at 2830.192 kb on - strand, within ECD_02698at 2830.251 kb on + strand, within ECD_02698at 2830.251 kb on + strand, within ECD_02698at 2830.251 kb on + strand, within ECD_02698at 2830.251 kb on + strand, within ECD_02698at 2830.251 kb on + strand, within ECD_02698at 2830.251 kb on + strand, within ECD_02698at 2830.251 kb on + strand, within ECD_02698at 2830.251 kb on + strand, within ECD_02698at 2830.251 kb on + strand, within ECD_02698at 2830.251 kb on + strand, within ECD_02698at 2830.251 kb on + strand, within ECD_02698at 2830.251 kb on + strand, within ECD_02698at 2830.251 kb on + strand, within ECD_02698at 2830.251 kb on + strand, within ECD_02698at 2830.252 kb on - strand, within ECD_02698at 2830.252 kb on - strand, within ECD_02698at 2830.252 kb on - strand, within ECD_02698at 2830.252 kb on - strand, within ECD_02698at 2830.252 kb on - strand, within ECD_02698at 2830.252 kb on - strand, within ECD_02698at 2830.252 kb on - strand, within ECD_02698at 2830.252 kb on - strand, within ECD_02698at 2830.278 kb on + strand, within ECD_02698at 2830.278 kb on + strand, within ECD_02698at 2830.282 kb on + strand, within ECD_02698at 2830.282 kb on + strand, within ECD_02698at 2830.282 kb on + strand, within ECD_02698at 2830.283 kb on - strand, within ECD_02698at 2830.283 kb on - strand, within ECD_02698at 2830.289 kb on - strand, within ECD_02698at 2830.352 kb on - strand, within ECD_02698at 2830.352 kb on - strand, within ECD_02698at 2830.352 kb on - strand, within ECD_02698at 2830.392 kb on - strand, within ECD_02698at 2830.478 kb on - strand, within ECD_02698at 2830.478 kb on - strand, within ECD_02698at 2830.478 kb on - strand, within ECD_02698at 2830.478 kb on - strand, within ECD_02698at 2830.478 kb on - strand, within ECD_02698at 2830.478 kb on - strand, within ECD_02698at 2830.480 kb on + strand, within ECD_02698at 2830.480 kb on + strand, within ECD_02698at 2830.487 kb on - strand, within ECD_02698at 2830.487 kb on - strand, within ECD_02698at 2830.533 kb on + strand, within ECD_02698at 2830.533 kb on + strand, within ECD_02698at 2830.533 kb on + strand, within ECD_02698at 2830.534 kb on - strand, within ECD_02698at 2830.534 kb on - strand, within ECD_02698at 2830.571 kb on + strand, within ECD_02698at 2830.597 kb on + strand, within ECD_02698at 2830.598 kb on - strand, within ECD_02698at 2830.602 kb on + strand, within ECD_02698at 2830.604 kb on + strand, within ECD_02698at 2830.604 kb on + strand, within ECD_02698at 2830.605 kb on - strand, within ECD_02698

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Per-strain Table

Position Strand Gene LocusTag Fraction EV116
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2,829,058 + -1.4
2,829,058 + -1.2
2,829,143 + ECD_02697 0.16 -0.6
2,829,143 + ECD_02697 0.16 +1.7
2,829,143 + ECD_02697 0.16 +0.1
2,829,144 - ECD_02697 0.16 -0.2
2,829,144 - ECD_02697 0.16 +0.7
2,829,144 - ECD_02697 0.16 -0.3
2,829,144 - ECD_02697 0.16 -0.2
2,829,144 - ECD_02697 0.16 +1.5
2,829,144 - ECD_02697 0.16 +0.0
2,829,145 + ECD_02697 0.16 +1.3
2,829,201 + ECD_02697 0.26 +0.3
2,829,205 - ECD_02697 0.27 +0.2
2,829,205 - ECD_02697 0.27 +0.7
2,829,214 + ECD_02697 0.28 -0.4
2,829,214 + ECD_02697 0.28 +0.6
2,829,214 + ECD_02697 0.28 +1.1
2,829,215 - ECD_02697 0.29 -0.1
2,829,215 - ECD_02697 0.29 -1.1
2,829,228 - ECD_02697 0.31 +1.7
2,829,384 - ECD_02697 0.59 -0.7
2,829,386 - ECD_02697 0.60 +0.5
2,829,568 - +0.9
2,829,589 - +1.8
2,829,656 + -1.7
2,829,876 - ECD_t00054 0.41 -0.0
2,829,876 - ECD_t00054 0.41 -0.1
2,829,878 - ECD_t00054 0.43 +0.2
2,829,878 - ECD_t00054 0.43 -1.6
2,829,878 - ECD_t00054 0.43 -2.3
2,829,901 - ECD_t00054 0.74 +0.4
2,829,901 - ECD_t00054 0.74 -0.4
2,829,912 - +0.4
2,829,912 - +0.2
2,829,912 - -2.6
2,829,948 + -0.3
2,829,948 + -0.3
2,830,032 + -0.6
2,830,032 + +0.2
2,830,032 + -0.0
2,830,032 + +2.4
2,830,032 + -1.2
2,830,033 - -0.0
2,830,151 - ECD_02698 0.20 +0.3
2,830,151 - ECD_02698 0.20 -1.5
2,830,154 + ECD_02698 0.21 -0.2
2,830,180 - ECD_02698 0.24 +0.5
2,830,180 - ECD_02698 0.24 -1.8
2,830,186 + ECD_02698 0.25 -0.2
2,830,187 - ECD_02698 0.25 -2.2
2,830,191 + ECD_02698 0.26 +0.7
2,830,191 + ECD_02698 0.26 +0.1
2,830,191 + ECD_02698 0.26 -0.8
2,830,192 - ECD_02698 0.26 -0.5
2,830,251 + ECD_02698 0.33 +2.0
2,830,251 + ECD_02698 0.33 -1.0
2,830,251 + ECD_02698 0.33 +2.4
2,830,251 + ECD_02698 0.33 +0.2
2,830,251 + ECD_02698 0.33 -1.6
2,830,251 + ECD_02698 0.33 -1.2
2,830,251 + ECD_02698 0.33 -0.1
2,830,251 + ECD_02698 0.33 +0.8
2,830,251 + ECD_02698 0.33 +0.4
2,830,251 + ECD_02698 0.33 +0.9
2,830,251 + ECD_02698 0.33 +0.0
2,830,251 + ECD_02698 0.33 +0.9
2,830,251 + ECD_02698 0.33 -0.2
2,830,251 + ECD_02698 0.33 -1.6
2,830,252 - ECD_02698 0.34 -0.3
2,830,252 - ECD_02698 0.34 +0.2
2,830,252 - ECD_02698 0.34 +1.2
2,830,252 - ECD_02698 0.34 +1.8
2,830,252 - ECD_02698 0.34 -0.1
2,830,252 - ECD_02698 0.34 +1.0
2,830,252 - ECD_02698 0.34 -1.1
2,830,252 - ECD_02698 0.34 -0.9
2,830,278 + ECD_02698 0.37 -0.5
2,830,278 + ECD_02698 0.37 +0.7
2,830,282 + ECD_02698 0.38 -2.2
2,830,282 + ECD_02698 0.38 +0.4
2,830,282 + ECD_02698 0.38 +0.7
2,830,283 - ECD_02698 0.38 +1.5
2,830,283 - ECD_02698 0.38 +0.2
2,830,289 - ECD_02698 0.38 -0.3
2,830,352 - ECD_02698 0.47 +2.0
2,830,352 - ECD_02698 0.47 +0.9
2,830,352 - ECD_02698 0.47 +1.4
2,830,392 - ECD_02698 0.52 +1.1
2,830,478 - ECD_02698 0.63 -1.6
2,830,478 - ECD_02698 0.63 -0.2
2,830,478 - ECD_02698 0.63 -0.1
2,830,478 - ECD_02698 0.63 +1.4
2,830,478 - ECD_02698 0.63 +1.9
2,830,478 - ECD_02698 0.63 +1.0
2,830,480 + ECD_02698 0.64 +1.5
2,830,480 + ECD_02698 0.64 +1.4
2,830,487 - ECD_02698 0.65 +2.4
2,830,487 - ECD_02698 0.65 +1.8
2,830,533 + ECD_02698 0.71 +0.5
2,830,533 + ECD_02698 0.71 -0.0
2,830,533 + ECD_02698 0.71 -0.3
2,830,534 - ECD_02698 0.71 -0.8
2,830,534 - ECD_02698 0.71 -0.2
2,830,571 + ECD_02698 0.76 +0.6
2,830,597 + ECD_02698 0.79 -1.0
2,830,598 - ECD_02698 0.79 -0.2
2,830,602 + ECD_02698 0.80 -0.9
2,830,604 + ECD_02698 0.80 -1.1
2,830,604 + ECD_02698 0.80 -1.9
2,830,605 - ECD_02698 0.80 +0.9

Or see this region's nucleotide sequence