Strain Fitness in Escherichia coli BL21 around ECD_02633

Experiment: EV116

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02632 and ECD_02633 are separated by 20 nucleotidesECD_02633 and ECD_02634 are separated by 1 nucleotides ECD_02632: ECD_02632 - D-glucarate dehydratase 1, at 2,750,635 to 2,751,975 _02632 ECD_02633: ECD_02633 - glucarate dehydratase-related protein, substrate unknown, at 2,751,996 to 2,753,336 _02633 ECD_02634: ECD_02634 - putative D-glucarate transporter, at 2,753,338 to 2,754,690 _02634 Position (kb) 2751 2752 2753 2754Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 2751.007 kb on + strand, within ECD_02632at 2751.075 kb on + strand, within ECD_02632at 2751.109 kb on - strand, within ECD_02632at 2751.203 kb on + strand, within ECD_02632at 2751.203 kb on + strand, within ECD_02632at 2751.203 kb on + strand, within ECD_02632at 2751.204 kb on - strand, within ECD_02632at 2751.204 kb on - strand, within ECD_02632at 2751.204 kb on - strand, within ECD_02632at 2751.224 kb on + strand, within ECD_02632at 2751.267 kb on + strand, within ECD_02632at 2751.280 kb on - strand, within ECD_02632at 2751.280 kb on - strand, within ECD_02632at 2751.280 kb on - strand, within ECD_02632at 2751.283 kb on - strand, within ECD_02632at 2751.318 kb on + strand, within ECD_02632at 2751.318 kb on + strand, within ECD_02632at 2751.318 kb on + strand, within ECD_02632at 2751.319 kb on - strand, within ECD_02632at 2751.319 kb on - strand, within ECD_02632at 2751.319 kb on - strand, within ECD_02632at 2751.527 kb on + strand, within ECD_02632at 2751.528 kb on - strand, within ECD_02632at 2751.528 kb on - strand, within ECD_02632at 2751.640 kb on + strand, within ECD_02632at 2751.640 kb on + strand, within ECD_02632at 2751.640 kb on + strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.655 kb on - strand, within ECD_02632at 2751.655 kb on - strand, within ECD_02632at 2751.659 kb on - strand, within ECD_02632at 2751.659 kb on - strand, within ECD_02632at 2751.659 kb on - strand, within ECD_02632at 2751.659 kb on - strand, within ECD_02632at 2751.659 kb on - strand, within ECD_02632at 2751.708 kb on + strand, within ECD_02632at 2751.737 kb on + strand, within ECD_02632at 2751.738 kb on - strand, within ECD_02632at 2751.760 kb on + strand, within ECD_02632at 2751.861 kb on + strandat 2751.906 kb on + strandat 2751.907 kb on - strandat 2751.907 kb on - strandat 2751.907 kb on - strandat 2751.946 kb on - strandat 2751.961 kb on - strandat 2751.975 kb on + strandat 2751.975 kb on + strandat 2751.975 kb on + strandat 2751.975 kb on + strandat 2751.976 kb on - strandat 2751.976 kb on - strandat 2751.979 kb on + strandat 2751.979 kb on + strandat 2751.979 kb on + strandat 2751.979 kb on + strandat 2751.979 kb on + strandat 2751.979 kb on + strandat 2751.979 kb on + strandat 2751.979 kb on + strandat 2751.979 kb on + strandat 2751.979 kb on + strandat 2751.980 kb on - strandat 2751.980 kb on - strandat 2751.980 kb on - strandat 2752.051 kb on + strandat 2752.051 kb on + strandat 2752.051 kb on + strandat 2752.051 kb on + strandat 2752.051 kb on + strandat 2752.052 kb on - strandat 2752.052 kb on - strandat 2752.098 kb on - strandat 2752.098 kb on - strandat 2752.100 kb on - strandat 2752.100 kb on - strandat 2752.120 kb on - strandat 2752.120 kb on - strandat 2752.184 kb on + strand, within ECD_02633at 2752.253 kb on + strand, within ECD_02633at 2752.316 kb on + strand, within ECD_02633at 2752.317 kb on - strand, within ECD_02633at 2752.319 kb on + strand, within ECD_02633at 2752.319 kb on + strand, within ECD_02633at 2752.319 kb on + strand, within ECD_02633at 2752.320 kb on - strand, within ECD_02633at 2752.320 kb on - strand, within ECD_02633at 2752.320 kb on - strand, within ECD_02633at 2752.320 kb on - strand, within ECD_02633at 2752.320 kb on - strand, within ECD_02633at 2752.415 kb on + strand, within ECD_02633at 2752.415 kb on + strand, within ECD_02633at 2752.415 kb on + strand, within ECD_02633at 2752.416 kb on - strand, within ECD_02633at 2752.416 kb on - strand, within ECD_02633at 2752.416 kb on - strand, within ECD_02633at 2752.476 kb on - strand, within ECD_02633at 2752.567 kb on + strand, within ECD_02633at 2752.568 kb on - strand, within ECD_02633at 2752.568 kb on - strand, within ECD_02633at 2752.568 kb on - strand, within ECD_02633at 2752.568 kb on - strand, within ECD_02633at 2752.571 kb on + strand, within ECD_02633at 2752.571 kb on + strand, within ECD_02633at 2752.571 kb on + strand, within ECD_02633at 2752.571 kb on + strand, within ECD_02633at 2752.571 kb on + strand, within ECD_02633at 2752.572 kb on - strand, within ECD_02633at 2752.572 kb on - strand, within ECD_02633at 2752.572 kb on - strand, within ECD_02633at 2752.572 kb on - strand, within ECD_02633at 2752.572 kb on - strand, within ECD_02633at 2752.572 kb on - strand, within ECD_02633at 2752.572 kb on - strand, within ECD_02633at 2752.572 kb on - strand, within ECD_02633at 2752.572 kb on - strand, within ECD_02633at 2752.643 kb on + strand, within ECD_02633at 2752.644 kb on - strand, within ECD_02633at 2752.721 kb on + strand, within ECD_02633at 2752.745 kb on - strand, within ECD_02633at 2752.838 kb on + strand, within ECD_02633at 2752.849 kb on + strand, within ECD_02633at 2752.849 kb on + strand, within ECD_02633at 2752.849 kb on + strand, within ECD_02633at 2752.849 kb on + strand, within ECD_02633at 2752.849 kb on + strand, within ECD_02633at 2752.850 kb on - strand, within ECD_02633at 2752.850 kb on - strand, within ECD_02633at 2752.850 kb on - strand, within ECD_02633at 2752.850 kb on - strand, within ECD_02633at 2752.880 kb on + strand, within ECD_02633at 2752.882 kb on + strand, within ECD_02633at 2752.882 kb on + strand, within ECD_02633at 2752.882 kb on + strand, within ECD_02633at 2752.882 kb on + strand, within ECD_02633at 2752.883 kb on - strand, within ECD_02633at 2752.891 kb on + strand, within ECD_02633at 2752.892 kb on - strand, within ECD_02633at 2752.905 kb on - strand, within ECD_02633at 2752.905 kb on - strand, within ECD_02633at 2752.907 kb on + strand, within ECD_02633at 2752.907 kb on + strand, within ECD_02633at 2752.907 kb on + strand, within ECD_02633at 2752.908 kb on - strand, within ECD_02633at 2752.908 kb on - strand, within ECD_02633at 2752.933 kb on - strand, within ECD_02633at 2752.964 kb on + strand, within ECD_02633at 2752.965 kb on - strand, within ECD_02633at 2752.968 kb on + strand, within ECD_02633at 2752.969 kb on - strand, within ECD_02633at 2752.969 kb on - strand, within ECD_02633at 2753.017 kb on - strand, within ECD_02633at 2753.070 kb on - strand, within ECD_02633at 2753.075 kb on + strand, within ECD_02633at 2753.096 kb on + strand, within ECD_02633at 2753.136 kb on - strand, within ECD_02633at 2753.136 kb on - strand, within ECD_02633at 2753.215 kb on - strandat 2753.222 kb on + strandat 2753.223 kb on - strandat 2753.236 kb on + strandat 2753.237 kb on - strandat 2753.243 kb on + strandat 2753.243 kb on + strandat 2753.243 kb on + strandat 2753.244 kb on - strandat 2753.259 kb on - strandat 2753.259 kb on - strandat 2753.304 kb on - strandat 2753.310 kb on - strandat 2753.312 kb on + strandat 2753.313 kb on - strandat 2753.313 kb on - strandat 2753.340 kb on - strandat 2753.396 kb on + strandat 2753.432 kb on + strandat 2753.433 kb on - strandat 2753.433 kb on - strandat 2753.433 kb on - strandat 2753.473 kb on - strandat 2753.473 kb on - strandat 2753.473 kb on - strandat 2753.473 kb on - strandat 2753.474 kb on + strand, within ECD_02634at 2753.474 kb on + strand, within ECD_02634at 2753.475 kb on - strand, within ECD_02634at 2753.475 kb on - strand, within ECD_02634at 2753.657 kb on + strand, within ECD_02634at 2753.657 kb on + strand, within ECD_02634at 2753.657 kb on + strand, within ECD_02634at 2753.658 kb on - strand, within ECD_02634at 2753.658 kb on - strand, within ECD_02634at 2753.658 kb on - strand, within ECD_02634at 2753.658 kb on - strand, within ECD_02634at 2753.658 kb on - strand, within ECD_02634at 2753.658 kb on - strand, within ECD_02634at 2753.658 kb on - strand, within ECD_02634at 2753.658 kb on - strand, within ECD_02634at 2753.658 kb on - strand, within ECD_02634at 2753.698 kb on + strand, within ECD_02634at 2753.698 kb on + strand, within ECD_02634at 2753.712 kb on + strand, within ECD_02634at 2753.713 kb on - strand, within ECD_02634at 2753.761 kb on - strand, within ECD_02634at 2753.858 kb on + strand, within ECD_02634at 2753.858 kb on + strand, within ECD_02634at 2753.859 kb on - strand, within ECD_02634at 2753.859 kb on - strand, within ECD_02634at 2753.874 kb on + strand, within ECD_02634at 2753.875 kb on - strand, within ECD_02634at 2753.875 kb on - strand, within ECD_02634at 2753.878 kb on - strand, within ECD_02634at 2753.885 kb on + strand, within ECD_02634at 2753.885 kb on + strand, within ECD_02634at 2753.885 kb on + strand, within ECD_02634at 2753.885 kb on + strand, within ECD_02634at 2753.901 kb on + strand, within ECD_02634at 2753.902 kb on - strand, within ECD_02634at 2753.902 kb on - strand, within ECD_02634at 2753.918 kb on + strand, within ECD_02634at 2753.918 kb on + strand, within ECD_02634at 2753.919 kb on - strand, within ECD_02634at 2753.919 kb on - strand, within ECD_02634at 2753.945 kb on - strand, within ECD_02634at 2753.994 kb on + strand, within ECD_02634at 2754.013 kb on - strand, within ECD_02634at 2754.041 kb on + strand, within ECD_02634at 2754.042 kb on - strand, within ECD_02634at 2754.042 kb on - strand, within ECD_02634at 2754.106 kb on - strand, within ECD_02634at 2754.336 kb on + strand, within ECD_02634

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Per-strain Table

Position Strand Gene LocusTag Fraction EV116
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2,751,007 + ECD_02632 0.28 +3.7
2,751,075 + ECD_02632 0.33 -1.1
2,751,109 - ECD_02632 0.35 -0.8
2,751,203 + ECD_02632 0.42 +1.4
2,751,203 + ECD_02632 0.42 -1.2
2,751,203 + ECD_02632 0.42 -2.4
2,751,204 - ECD_02632 0.42 +1.2
2,751,204 - ECD_02632 0.42 +0.7
2,751,204 - ECD_02632 0.42 -1.5
2,751,224 + ECD_02632 0.44 +0.0
2,751,267 + ECD_02632 0.47 +0.4
2,751,280 - ECD_02632 0.48 +1.4
2,751,280 - ECD_02632 0.48 -0.3
2,751,280 - ECD_02632 0.48 +0.4
2,751,283 - ECD_02632 0.48 -1.1
2,751,318 + ECD_02632 0.51 +1.3
2,751,318 + ECD_02632 0.51 +0.3
2,751,318 + ECD_02632 0.51 -0.1
2,751,319 - ECD_02632 0.51 +0.1
2,751,319 - ECD_02632 0.51 +0.4
2,751,319 - ECD_02632 0.51 +0.5
2,751,527 + ECD_02632 0.67 -0.7
2,751,528 - ECD_02632 0.67 -1.4
2,751,528 - ECD_02632 0.67 -0.1
2,751,640 + ECD_02632 0.75 -0.3
2,751,640 + ECD_02632 0.75 +0.9
2,751,640 + ECD_02632 0.75 -0.1
2,751,641 - ECD_02632 0.75 +1.6
2,751,641 - ECD_02632 0.75 -1.1
2,751,641 - ECD_02632 0.75 -1.1
2,751,641 - ECD_02632 0.75 -0.9
2,751,641 - ECD_02632 0.75 -0.7
2,751,641 - ECD_02632 0.75 +0.1
2,751,641 - ECD_02632 0.75 +0.0
2,751,641 - ECD_02632 0.75 +0.3
2,751,641 - ECD_02632 0.75 +1.3
2,751,641 - ECD_02632 0.75 -0.1
2,751,641 - ECD_02632 0.75 -0.5
2,751,655 - ECD_02632 0.76 -1.2
2,751,655 - ECD_02632 0.76 +0.4
2,751,659 - ECD_02632 0.76 +0.3
2,751,659 - ECD_02632 0.76 +0.2
2,751,659 - ECD_02632 0.76 +0.0
2,751,659 - ECD_02632 0.76 +0.3
2,751,659 - ECD_02632 0.76 -1.4
2,751,708 + ECD_02632 0.80 +0.2
2,751,737 + ECD_02632 0.82 +0.5
2,751,738 - ECD_02632 0.82 +0.3
2,751,760 + ECD_02632 0.84 +0.8
2,751,861 + +0.2
2,751,906 + -1.7
2,751,907 - +0.1
2,751,907 - -0.3
2,751,907 - -1.3
2,751,946 - +1.0
2,751,961 - -0.2
2,751,975 + +0.6
2,751,975 + +0.6
2,751,975 + +1.0
2,751,975 + +0.5
2,751,976 - +1.8
2,751,976 - -0.5
2,751,979 + +0.1
2,751,979 + -0.4
2,751,979 + +2.6
2,751,979 + +0.8
2,751,979 + -0.4
2,751,979 + +1.6
2,751,979 + +0.6
2,751,979 + -0.1
2,751,979 + -0.1
2,751,979 + -1.8
2,751,980 - +0.0
2,751,980 - +0.4
2,751,980 - +0.6
2,752,051 + +0.0
2,752,051 + -0.1
2,752,051 + -0.3
2,752,051 + +0.3
2,752,051 + +0.5
2,752,052 - +1.0
2,752,052 - -0.4
2,752,098 - +0.9
2,752,098 - +0.0
2,752,100 - -0.7
2,752,100 - -0.5
2,752,120 - -0.1
2,752,120 - -0.6
2,752,184 + ECD_02633 0.14 -1.6
2,752,253 + ECD_02633 0.19 +1.6
2,752,316 + ECD_02633 0.24 -0.1
2,752,317 - ECD_02633 0.24 +2.4
2,752,319 + ECD_02633 0.24 -2.1
2,752,319 + ECD_02633 0.24 -0.4
2,752,319 + ECD_02633 0.24 +1.3
2,752,320 - ECD_02633 0.24 +0.3
2,752,320 - ECD_02633 0.24 -0.7
2,752,320 - ECD_02633 0.24 -2.2
2,752,320 - ECD_02633 0.24 +0.7
2,752,320 - ECD_02633 0.24 -0.5
2,752,415 + ECD_02633 0.31 -0.3
2,752,415 + ECD_02633 0.31 -0.2
2,752,415 + ECD_02633 0.31 -0.0
2,752,416 - ECD_02633 0.31 -1.9
2,752,416 - ECD_02633 0.31 -0.0
2,752,416 - ECD_02633 0.31 -1.3
2,752,476 - ECD_02633 0.36 -0.7
2,752,567 + ECD_02633 0.43 -0.4
2,752,568 - ECD_02633 0.43 -0.5
2,752,568 - ECD_02633 0.43 +1.2
2,752,568 - ECD_02633 0.43 -0.1
2,752,568 - ECD_02633 0.43 -0.2
2,752,571 + ECD_02633 0.43 -0.4
2,752,571 + ECD_02633 0.43 -0.2
2,752,571 + ECD_02633 0.43 +1.2
2,752,571 + ECD_02633 0.43 +0.0
2,752,571 + ECD_02633 0.43 +0.4
2,752,572 - ECD_02633 0.43 -1.1
2,752,572 - ECD_02633 0.43 -0.8
2,752,572 - ECD_02633 0.43 +1.1
2,752,572 - ECD_02633 0.43 -1.1
2,752,572 - ECD_02633 0.43 -0.4
2,752,572 - ECD_02633 0.43 +0.9
2,752,572 - ECD_02633 0.43 -0.3
2,752,572 - ECD_02633 0.43 -0.5
2,752,572 - ECD_02633 0.43 -1.0
2,752,643 + ECD_02633 0.48 +0.5
2,752,644 - ECD_02633 0.48 -0.9
2,752,721 + ECD_02633 0.54 -1.7
2,752,745 - ECD_02633 0.56 -0.8
2,752,838 + ECD_02633 0.63 -0.5
2,752,849 + ECD_02633 0.64 +0.8
2,752,849 + ECD_02633 0.64 +1.7
2,752,849 + ECD_02633 0.64 +1.8
2,752,849 + ECD_02633 0.64 -0.3
2,752,849 + ECD_02633 0.64 -2.1
2,752,850 - ECD_02633 0.64 +0.8
2,752,850 - ECD_02633 0.64 +0.3
2,752,850 - ECD_02633 0.64 -0.9
2,752,850 - ECD_02633 0.64 -1.4
2,752,880 + ECD_02633 0.66 +0.6
2,752,882 + ECD_02633 0.66 +0.3
2,752,882 + ECD_02633 0.66 +0.0
2,752,882 + ECD_02633 0.66 +0.1
2,752,882 + ECD_02633 0.66 -2.1
2,752,883 - ECD_02633 0.66 -0.5
2,752,891 + ECD_02633 0.67 +1.0
2,752,892 - ECD_02633 0.67 -0.3
2,752,905 - ECD_02633 0.68 -0.7
2,752,905 - ECD_02633 0.68 -1.4
2,752,907 + ECD_02633 0.68 +2.3
2,752,907 + ECD_02633 0.68 -0.4
2,752,907 + ECD_02633 0.68 -0.1
2,752,908 - ECD_02633 0.68 +1.2
2,752,908 - ECD_02633 0.68 +4.3
2,752,933 - ECD_02633 0.70 +1.5
2,752,964 + ECD_02633 0.72 -0.1
2,752,965 - ECD_02633 0.72 +1.7
2,752,968 + ECD_02633 0.72 +0.7
2,752,969 - ECD_02633 0.73 +1.3
2,752,969 - ECD_02633 0.73 +0.3
2,753,017 - ECD_02633 0.76 +0.7
2,753,070 - ECD_02633 0.80 -0.6
2,753,075 + ECD_02633 0.80 -0.3
2,753,096 + ECD_02633 0.82 +0.0
2,753,136 - ECD_02633 0.85 +0.4
2,753,136 - ECD_02633 0.85 +0.2
2,753,215 - -0.1
2,753,222 + -2.0
2,753,223 - +0.5
2,753,236 + +0.1
2,753,237 - -1.9
2,753,243 + +1.1
2,753,243 + +0.0
2,753,243 + +1.2
2,753,244 - +0.3
2,753,259 - +0.3
2,753,259 - +0.1
2,753,304 - +0.2
2,753,310 - +0.0
2,753,312 + +2.5
2,753,313 - -0.5
2,753,313 - +0.2
2,753,340 - +1.5
2,753,396 + -1.8
2,753,432 + +0.9
2,753,433 - +0.0
2,753,433 - +0.3
2,753,433 - -0.5
2,753,473 - -0.3
2,753,473 - -0.0
2,753,473 - +0.6
2,753,473 - -0.2
2,753,474 + ECD_02634 0.10 +0.9
2,753,474 + ECD_02634 0.10 +0.8
2,753,475 - ECD_02634 0.10 +0.7
2,753,475 - ECD_02634 0.10 -1.7
2,753,657 + ECD_02634 0.24 -0.1
2,753,657 + ECD_02634 0.24 +0.7
2,753,657 + ECD_02634 0.24 -0.4
2,753,658 - ECD_02634 0.24 +0.1
2,753,658 - ECD_02634 0.24 +0.9
2,753,658 - ECD_02634 0.24 -1.3
2,753,658 - ECD_02634 0.24 -0.5
2,753,658 - ECD_02634 0.24 -0.8
2,753,658 - ECD_02634 0.24 -1.3
2,753,658 - ECD_02634 0.24 -0.9
2,753,658 - ECD_02634 0.24 +0.0
2,753,658 - ECD_02634 0.24 -0.1
2,753,698 + ECD_02634 0.27 +1.3
2,753,698 + ECD_02634 0.27 +1.4
2,753,712 + ECD_02634 0.28 +0.7
2,753,713 - ECD_02634 0.28 -0.6
2,753,761 - ECD_02634 0.31 -0.9
2,753,858 + ECD_02634 0.38 +0.5
2,753,858 + ECD_02634 0.38 +0.5
2,753,859 - ECD_02634 0.39 -0.8
2,753,859 - ECD_02634 0.39 -0.7
2,753,874 + ECD_02634 0.40 -0.5
2,753,875 - ECD_02634 0.40 -1.9
2,753,875 - ECD_02634 0.40 -0.3
2,753,878 - ECD_02634 0.40 -0.7
2,753,885 + ECD_02634 0.40 -2.2
2,753,885 + ECD_02634 0.40 -1.4
2,753,885 + ECD_02634 0.40 -0.6
2,753,885 + ECD_02634 0.40 -1.2
2,753,901 + ECD_02634 0.42 +0.4
2,753,902 - ECD_02634 0.42 -0.4
2,753,902 - ECD_02634 0.42 -0.9
2,753,918 + ECD_02634 0.43 +0.3
2,753,918 + ECD_02634 0.43 +0.6
2,753,919 - ECD_02634 0.43 -1.4
2,753,919 - ECD_02634 0.43 -0.2
2,753,945 - ECD_02634 0.45 +4.8
2,753,994 + ECD_02634 0.48 +0.3
2,754,013 - ECD_02634 0.50 +3.7
2,754,041 + ECD_02634 0.52 -0.0
2,754,042 - ECD_02634 0.52 -1.2
2,754,042 - ECD_02634 0.52 +1.0
2,754,106 - ECD_02634 0.57 -0.5
2,754,336 + ECD_02634 0.74 -0.2

Or see this region's nucleotide sequence