Experiment: EV116
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02532 and ECD_02533 are separated by 353 nucleotides ECD_02533 and ECD_02534 overlap by 8 nucleotides
ECD_02532: ECD_02532 - ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein, at 2,643,361 to 2,644,320
_02532
ECD_02533: ECD_02533 - glycine betaine/proline ABC transporter periplasmic binding protein, at 2,644,674 to 2,645,876
_02533
ECD_02534: ECD_02534 - glycine betaine/proline ABC transporter permease, at 2,645,869 to 2,646,933
_02534
Position (kb)
2644
2645
2646 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2643.674 kb on - strand, within ECD_02532 at 2643.674 kb on - strand, within ECD_02532 at 2643.695 kb on + strand, within ECD_02532 at 2643.696 kb on - strand, within ECD_02532 at 2643.785 kb on - strand, within ECD_02532 at 2643.871 kb on + strand, within ECD_02532 at 2643.949 kb on + strand, within ECD_02532 at 2643.953 kb on - strand, within ECD_02532 at 2643.956 kb on + strand, within ECD_02532 at 2643.956 kb on + strand, within ECD_02532 at 2643.956 kb on + strand, within ECD_02532 at 2643.957 kb on - strand, within ECD_02532 at 2643.957 kb on - strand, within ECD_02532 at 2643.957 kb on - strand, within ECD_02532 at 2643.963 kb on + strand, within ECD_02532 at 2643.964 kb on - strand, within ECD_02532 at 2643.964 kb on - strand, within ECD_02532 at 2644.048 kb on + strand, within ECD_02532 at 2644.066 kb on + strand, within ECD_02532 at 2644.066 kb on + strand, within ECD_02532 at 2644.067 kb on - strand, within ECD_02532 at 2644.067 kb on - strand, within ECD_02532 at 2644.067 kb on - strand, within ECD_02532 at 2644.137 kb on + strand, within ECD_02532 at 2644.137 kb on + strand, within ECD_02532 at 2644.270 kb on + strand at 2644.270 kb on + strand at 2644.271 kb on - strand at 2644.271 kb on - strand at 2644.271 kb on - strand at 2644.516 kb on - strand at 2644.636 kb on + strand at 2644.871 kb on + strand, within ECD_02533 at 2644.885 kb on + strand, within ECD_02533 at 2645.023 kb on + strand, within ECD_02533 at 2645.034 kb on - strand, within ECD_02533 at 2645.081 kb on + strand, within ECD_02533 at 2645.216 kb on + strand, within ECD_02533 at 2645.227 kb on + strand, within ECD_02533 at 2645.227 kb on + strand, within ECD_02533 at 2645.227 kb on + strand, within ECD_02533 at 2645.227 kb on + strand, within ECD_02533 at 2645.230 kb on + strand, within ECD_02533 at 2645.230 kb on + strand, within ECD_02533 at 2645.230 kb on + strand, within ECD_02533 at 2645.233 kb on + strand, within ECD_02533 at 2645.266 kb on + strand, within ECD_02533 at 2645.333 kb on + strand, within ECD_02533 at 2645.451 kb on + strand, within ECD_02533 at 2645.451 kb on + strand, within ECD_02533 at 2645.452 kb on - strand, within ECD_02533 at 2645.459 kb on + strand, within ECD_02533 at 2645.460 kb on - strand, within ECD_02533 at 2645.480 kb on + strand, within ECD_02533 at 2645.483 kb on + strand, within ECD_02533 at 2645.507 kb on + strand, within ECD_02533 at 2645.534 kb on - strand, within ECD_02533 at 2645.601 kb on + strand, within ECD_02533 at 2645.601 kb on + strand, within ECD_02533 at 2645.601 kb on + strand, within ECD_02533 at 2645.607 kb on + strand, within ECD_02533 at 2645.607 kb on + strand, within ECD_02533 at 2645.608 kb on - strand, within ECD_02533 at 2645.627 kb on + strand, within ECD_02533 at 2645.627 kb on + strand, within ECD_02533 at 2645.627 kb on + strand, within ECD_02533 at 2645.627 kb on + strand, within ECD_02533 at 2645.627 kb on + strand, within ECD_02533 at 2645.627 kb on + strand, within ECD_02533 at 2645.627 kb on + strand, within ECD_02533 at 2645.627 kb on + strand, within ECD_02533 at 2645.627 kb on + strand, within ECD_02533 at 2645.628 kb on - strand, within ECD_02533 at 2645.628 kb on - strand, within ECD_02533 at 2645.628 kb on - strand, within ECD_02533 at 2645.628 kb on - strand, within ECD_02533 at 2645.741 kb on + strand, within ECD_02533 at 2645.741 kb on + strand, within ECD_02533 at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.808 kb on + strand at 2645.809 kb on - strand at 2645.809 kb on - strand at 2645.809 kb on - strand at 2645.809 kb on - strand at 2645.809 kb on - strand at 2645.809 kb on - strand at 2645.809 kb on - strand at 2645.848 kb on + strand at 2645.848 kb on + strand at 2645.848 kb on + strand at 2645.848 kb on + strand at 2645.849 kb on - strand at 2645.849 kb on - strand at 2645.849 kb on - strand at 2645.849 kb on - strand at 2645.867 kb on + strand at 2645.867 kb on + strand at 2645.868 kb on - strand at 2645.943 kb on + strand at 2645.943 kb on + strand at 2645.995 kb on - strand, within ECD_02534 at 2646.022 kb on - strand, within ECD_02534 at 2646.042 kb on + strand, within ECD_02534 at 2646.043 kb on - strand, within ECD_02534 at 2646.142 kb on + strand, within ECD_02534 at 2646.142 kb on + strand, within ECD_02534 at 2646.142 kb on + strand, within ECD_02534 at 2646.142 kb on + strand, within ECD_02534 at 2646.142 kb on + strand, within ECD_02534 at 2646.142 kb on + strand, within ECD_02534 at 2646.142 kb on + strand, within ECD_02534 at 2646.142 kb on + strand, within ECD_02534 at 2646.142 kb on + strand, within ECD_02534 at 2646.142 kb on + strand, within ECD_02534 at 2646.142 kb on + strand, within ECD_02534 at 2646.142 kb on + strand, within ECD_02534 at 2646.142 kb on + strand, within ECD_02534 at 2646.142 kb on + strand, within ECD_02534 at 2646.142 kb on + strand, within ECD_02534 at 2646.143 kb on - strand, within ECD_02534 at 2646.143 kb on - strand, within ECD_02534 at 2646.143 kb on - strand, within ECD_02534 at 2646.143 kb on - strand, within ECD_02534 at 2646.143 kb on - strand, within ECD_02534 at 2646.143 kb on - strand, within ECD_02534 at 2646.143 kb on - strand, within ECD_02534 at 2646.143 kb on - strand, within ECD_02534 at 2646.144 kb on + strand, within ECD_02534 at 2646.144 kb on + strand, within ECD_02534 at 2646.144 kb on + strand, within ECD_02534 at 2646.145 kb on - strand, within ECD_02534 at 2646.145 kb on - strand, within ECD_02534 at 2646.177 kb on + strand, within ECD_02534 at 2646.178 kb on - strand, within ECD_02534 at 2646.345 kb on + strand, within ECD_02534 at 2646.346 kb on - strand, within ECD_02534 at 2646.452 kb on - strand, within ECD_02534 at 2646.473 kb on + strand, within ECD_02534 at 2646.473 kb on + strand, within ECD_02534 at 2646.473 kb on + strand, within ECD_02534 at 2646.473 kb on + strand, within ECD_02534 at 2646.473 kb on + strand, within ECD_02534 at 2646.473 kb on + strand, within ECD_02534 at 2646.473 kb on + strand, within ECD_02534 at 2646.473 kb on + strand, within ECD_02534 at 2646.473 kb on + strand, within ECD_02534 at 2646.473 kb on + strand, within ECD_02534 at 2646.473 kb on + strand, within ECD_02534 at 2646.473 kb on + strand, within ECD_02534 at 2646.474 kb on - strand, within ECD_02534 at 2646.474 kb on - strand, within ECD_02534 at 2646.474 kb on - strand, within ECD_02534 at 2646.474 kb on - strand, within ECD_02534 at 2646.535 kb on - strand, within ECD_02534 at 2646.558 kb on + strand, within ECD_02534 at 2646.558 kb on + strand, within ECD_02534 at 2646.699 kb on + strand, within ECD_02534 at 2646.699 kb on + strand, within ECD_02534 at 2646.699 kb on + strand, within ECD_02534 at 2646.699 kb on + strand, within ECD_02534 at 2646.699 kb on + strand, within ECD_02534 at 2646.700 kb on - strand, within ECD_02534 at 2646.700 kb on - strand, within ECD_02534 at 2646.749 kb on + strand, within ECD_02534 at 2646.749 kb on + strand, within ECD_02534 at 2646.749 kb on + strand, within ECD_02534 at 2646.750 kb on - strand, within ECD_02534 at 2646.822 kb on + strand, within ECD_02534
Per-strain Table
Position Strand Gene LocusTag Fraction EV116 remove 2,643,674 - ECD_02532 0.33 +1.2 2,643,674 - ECD_02532 0.33 +1.7 2,643,695 + ECD_02532 0.35 -1.6 2,643,696 - ECD_02532 0.35 -0.1 2,643,785 - ECD_02532 0.44 +2.0 2,643,871 + ECD_02532 0.53 -0.7 2,643,949 + ECD_02532 0.61 +0.1 2,643,953 - ECD_02532 0.62 +0.3 2,643,956 + ECD_02532 0.62 -0.8 2,643,956 + ECD_02532 0.62 -0.9 2,643,956 + ECD_02532 0.62 +1.5 2,643,957 - ECD_02532 0.62 +1.6 2,643,957 - ECD_02532 0.62 +2.2 2,643,957 - ECD_02532 0.62 +2.0 2,643,963 + ECD_02532 0.63 -0.1 2,643,964 - ECD_02532 0.63 +0.5 2,643,964 - ECD_02532 0.63 +2.5 2,644,048 + ECD_02532 0.72 +0.1 2,644,066 + ECD_02532 0.73 -1.5 2,644,066 + ECD_02532 0.73 +0.3 2,644,067 - ECD_02532 0.74 +1.1 2,644,067 - ECD_02532 0.74 +0.3 2,644,067 - ECD_02532 0.74 +1.9 2,644,137 + ECD_02532 0.81 +0.8 2,644,137 + ECD_02532 0.81 -1.8 2,644,270 + +1.4 2,644,270 + -0.5 2,644,271 - -1.4 2,644,271 - +1.5 2,644,271 - -0.7 2,644,516 - -2.1 2,644,636 + +0.7 2,644,871 + ECD_02533 0.16 -0.8 2,644,885 + ECD_02533 0.18 -3.0 2,645,023 + ECD_02533 0.29 -1.6 2,645,034 - ECD_02533 0.30 -0.3 2,645,081 + ECD_02533 0.34 -3.1 2,645,216 + ECD_02533 0.45 -2.7 2,645,227 + ECD_02533 0.46 -3.6 2,645,227 + ECD_02533 0.46 -2.6 2,645,227 + ECD_02533 0.46 -1.1 2,645,227 + ECD_02533 0.46 -1.3 2,645,230 + ECD_02533 0.46 -2.6 2,645,230 + ECD_02533 0.46 -0.8 2,645,230 + ECD_02533 0.46 -0.6 2,645,233 + ECD_02533 0.46 -1.8 2,645,266 + ECD_02533 0.49 -3.3 2,645,333 + ECD_02533 0.55 -1.9 2,645,451 + ECD_02533 0.65 -3.5 2,645,451 + ECD_02533 0.65 -2.8 2,645,452 - ECD_02533 0.65 -1.7 2,645,459 + ECD_02533 0.65 -1.8 2,645,460 - ECD_02533 0.65 -2.4 2,645,480 + ECD_02533 0.67 -0.8 2,645,483 + ECD_02533 0.67 -3.0 2,645,507 + ECD_02533 0.69 -3.0 2,645,534 - ECD_02533 0.71 -1.8 2,645,601 + ECD_02533 0.77 -0.4 2,645,601 + ECD_02533 0.77 -2.3 2,645,601 + ECD_02533 0.77 -0.7 2,645,607 + ECD_02533 0.78 +0.8 2,645,607 + ECD_02533 0.78 -1.8 2,645,608 - ECD_02533 0.78 -1.7 2,645,627 + ECD_02533 0.79 -1.6 2,645,627 + ECD_02533 0.79 -1.1 2,645,627 + ECD_02533 0.79 -1.7 2,645,627 + ECD_02533 0.79 -1.0 2,645,627 + ECD_02533 0.79 -1.4 2,645,627 + ECD_02533 0.79 -3.2 2,645,627 + ECD_02533 0.79 -0.6 2,645,627 + ECD_02533 0.79 -0.6 2,645,627 + ECD_02533 0.79 -2.3 2,645,628 - ECD_02533 0.79 -0.3 2,645,628 - ECD_02533 0.79 -0.7 2,645,628 - ECD_02533 0.79 -1.7 2,645,628 - ECD_02533 0.79 -1.7 2,645,741 + ECD_02533 0.89 -4.1 2,645,741 + ECD_02533 0.89 -1.0 2,645,808 + -1.5 2,645,808 + -1.6 2,645,808 + -2.4 2,645,808 + -2.3 2,645,808 + -1.6 2,645,808 + -1.0 2,645,808 + -3.3 2,645,808 + -1.3 2,645,808 + -1.2 2,645,808 + -3.2 2,645,808 + -1.7 2,645,808 + -1.8 2,645,808 + -2.2 2,645,808 + -2.4 2,645,808 + -3.0 2,645,808 + -1.1 2,645,808 + -4.1 2,645,808 + -3.3 2,645,808 + -2.6 2,645,808 + -1.9 2,645,808 + -4.6 2,645,809 - -2.5 2,645,809 - -1.7 2,645,809 - -2.4 2,645,809 - -2.7 2,645,809 - -1.9 2,645,809 - -2.1 2,645,809 - +0.8 2,645,848 + -2.1 2,645,848 + -3.4 2,645,848 + +0.3 2,645,848 + -2.0 2,645,849 - -2.0 2,645,849 - -2.1 2,645,849 - -1.2 2,645,849 - -0.0 2,645,867 + -2.3 2,645,867 + -2.0 2,645,868 - -2.0 2,645,943 + -0.8 2,645,943 + -3.0 2,645,995 - ECD_02534 0.12 -0.3 2,646,022 - ECD_02534 0.14 -1.3 2,646,042 + ECD_02534 0.16 -2.3 2,646,043 - ECD_02534 0.16 -2.2 2,646,142 + ECD_02534 0.26 -2.7 2,646,142 + ECD_02534 0.26 -2.6 2,646,142 + ECD_02534 0.26 -3.4 2,646,142 + ECD_02534 0.26 -2.1 2,646,142 + ECD_02534 0.26 -1.3 2,646,142 + ECD_02534 0.26 -2.4 2,646,142 + ECD_02534 0.26 -3.6 2,646,142 + ECD_02534 0.26 -2.5 2,646,142 + ECD_02534 0.26 -2.4 2,646,142 + ECD_02534 0.26 -3.0 2,646,142 + ECD_02534 0.26 -3.0 2,646,142 + ECD_02534 0.26 -4.1 2,646,142 + ECD_02534 0.26 -3.9 2,646,142 + ECD_02534 0.26 -1.7 2,646,142 + ECD_02534 0.26 -2.8 2,646,143 - ECD_02534 0.26 -1.0 2,646,143 - ECD_02534 0.26 -2.9 2,646,143 - ECD_02534 0.26 -1.0 2,646,143 - ECD_02534 0.26 -1.6 2,646,143 - ECD_02534 0.26 -2.4 2,646,143 - ECD_02534 0.26 -0.6 2,646,143 - ECD_02534 0.26 -3.5 2,646,143 - ECD_02534 0.26 -1.7 2,646,144 + ECD_02534 0.26 +0.5 2,646,144 + ECD_02534 0.26 -1.7 2,646,144 + ECD_02534 0.26 -2.5 2,646,145 - ECD_02534 0.26 -2.0 2,646,145 - ECD_02534 0.26 -2.5 2,646,177 + ECD_02534 0.29 -4.0 2,646,178 - ECD_02534 0.29 -3.7 2,646,345 + ECD_02534 0.45 -2.8 2,646,346 - ECD_02534 0.45 -2.5 2,646,452 - ECD_02534 0.55 -0.5 2,646,473 + ECD_02534 0.57 -3.2 2,646,473 + ECD_02534 0.57 -4.2 2,646,473 + ECD_02534 0.57 -4.1 2,646,473 + ECD_02534 0.57 -1.0 2,646,473 + ECD_02534 0.57 -0.2 2,646,473 + ECD_02534 0.57 -2.3 2,646,473 + ECD_02534 0.57 -2.8 2,646,473 + ECD_02534 0.57 -1.3 2,646,473 + ECD_02534 0.57 -1.5 2,646,473 + ECD_02534 0.57 -1.3 2,646,473 + ECD_02534 0.57 -1.8 2,646,473 + ECD_02534 0.57 -1.8 2,646,474 - ECD_02534 0.57 -2.0 2,646,474 - ECD_02534 0.57 -2.0 2,646,474 - ECD_02534 0.57 -1.8 2,646,474 - ECD_02534 0.57 -1.0 2,646,535 - ECD_02534 0.63 -1.8 2,646,558 + ECD_02534 0.65 -1.0 2,646,558 + ECD_02534 0.65 -0.5 2,646,699 + ECD_02534 0.78 -2.3 2,646,699 + ECD_02534 0.78 -4.1 2,646,699 + ECD_02534 0.78 -1.3 2,646,699 + ECD_02534 0.78 -1.2 2,646,699 + ECD_02534 0.78 -1.3 2,646,700 - ECD_02534 0.78 -1.8 2,646,700 - ECD_02534 0.78 -2.5 2,646,749 + ECD_02534 0.83 -0.7 2,646,749 + ECD_02534 0.83 -2.2 2,646,749 + ECD_02534 0.83 -3.8 2,646,750 - ECD_02534 0.83 -2.4 2,646,822 + ECD_02534 0.89 -0.8
Or see this region's nucleotide sequence