Experiment: EV116
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02490 and ECD_02491 are separated by 209 nucleotides ECD_02491 and ECD_02492 are separated by 149 nucleotides ECD_02492 and ECD_02493 overlap by 11 nucleotides
ECD_02490: ECD_02490 - 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible, at 2,606,594 to 2,607,664
_02490
ECD_02491: ECD_02491 - lipoprotein, at 2,607,874 to 2,608,239
_02491
ECD_02492: ECD_02492 - putative periplasmic inhibitor of YfiN activity, at 2,608,389 to 2,608,907
_02492
ECD_02493: ECD_02493 - putative membrane-anchored diguanylate cyclase, at 2,608,897 to 2,610,123
_02493
Position (kb)
2607
2608
2609 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2606.938 kb on + strand, within ECD_02490 at 2606.941 kb on - strand, within ECD_02490 at 2606.941 kb on - strand, within ECD_02490 at 2606.941 kb on - strand, within ECD_02490 at 2606.999 kb on + strand, within ECD_02490 at 2607.000 kb on - strand, within ECD_02490 at 2607.000 kb on - strand, within ECD_02490 at 2607.071 kb on - strand, within ECD_02490 at 2607.167 kb on - strand, within ECD_02490 at 2607.191 kb on - strand, within ECD_02490 at 2607.208 kb on - strand, within ECD_02490 at 2607.208 kb on - strand, within ECD_02490 at 2607.218 kb on - strand, within ECD_02490 at 2607.306 kb on - strand, within ECD_02490 at 2607.306 kb on - strand, within ECD_02490 at 2607.338 kb on - strand, within ECD_02490 at 2607.342 kb on - strand, within ECD_02490 at 2607.399 kb on + strand, within ECD_02490 at 2607.447 kb on + strand, within ECD_02490 at 2607.447 kb on + strand, within ECD_02490 at 2607.491 kb on + strand, within ECD_02490 at 2607.491 kb on + strand, within ECD_02490 at 2607.492 kb on - strand, within ECD_02490 at 2607.492 kb on - strand, within ECD_02490 at 2607.492 kb on - strand, within ECD_02490 at 2607.492 kb on - strand, within ECD_02490 at 2607.492 kb on - strand, within ECD_02490 at 2607.492 kb on - strand, within ECD_02490 at 2607.492 kb on - strand, within ECD_02490 at 2607.492 kb on - strand, within ECD_02490 at 2607.495 kb on - strand, within ECD_02490 at 2607.527 kb on - strand, within ECD_02490 at 2607.527 kb on - strand, within ECD_02490 at 2607.634 kb on + strand at 2607.634 kb on + strand at 2607.634 kb on + strand at 2607.635 kb on - strand at 2607.635 kb on - strand at 2607.635 kb on - strand at 2607.635 kb on - strand at 2607.635 kb on - strand at 2607.638 kb on + strand at 2607.639 kb on - strand at 2607.639 kb on - strand at 2607.639 kb on - strand at 2607.639 kb on - strand at 2607.639 kb on - strand at 2607.680 kb on + strand at 2607.681 kb on - strand at 2607.721 kb on - strand at 2607.786 kb on + strand at 2607.787 kb on - strand at 2607.937 kb on + strand, within ECD_02491 at 2607.937 kb on + strand, within ECD_02491 at 2607.938 kb on - strand, within ECD_02491 at 2607.939 kb on + strand, within ECD_02491 at 2607.939 kb on + strand, within ECD_02491 at 2607.939 kb on + strand, within ECD_02491 at 2607.940 kb on - strand, within ECD_02491 at 2607.940 kb on - strand, within ECD_02491 at 2607.940 kb on - strand, within ECD_02491 at 2607.974 kb on - strand, within ECD_02491 at 2607.974 kb on - strand, within ECD_02491 at 2607.974 kb on - strand, within ECD_02491 at 2607.974 kb on - strand, within ECD_02491 at 2608.013 kb on + strand, within ECD_02491 at 2608.013 kb on + strand, within ECD_02491 at 2608.059 kb on - strand, within ECD_02491 at 2608.059 kb on - strand, within ECD_02491 at 2608.059 kb on - strand, within ECD_02491 at 2608.059 kb on - strand, within ECD_02491 at 2608.060 kb on + strand, within ECD_02491 at 2608.061 kb on - strand, within ECD_02491 at 2608.061 kb on - strand, within ECD_02491 at 2608.061 kb on - strand, within ECD_02491 at 2608.114 kb on + strand, within ECD_02491 at 2608.115 kb on - strand, within ECD_02491 at 2608.191 kb on - strand, within ECD_02491 at 2608.330 kb on + strand at 2608.414 kb on + strand at 2608.447 kb on + strand, within ECD_02492 at 2608.487 kb on + strand, within ECD_02492 at 2608.487 kb on + strand, within ECD_02492 at 2608.487 kb on + strand, within ECD_02492 at 2608.488 kb on - strand, within ECD_02492 at 2608.488 kb on - strand, within ECD_02492 at 2608.488 kb on - strand, within ECD_02492 at 2608.488 kb on - strand, within ECD_02492 at 2608.512 kb on + strand, within ECD_02492 at 2608.512 kb on + strand, within ECD_02492 at 2608.549 kb on + strand, within ECD_02492 at 2608.549 kb on + strand, within ECD_02492 at 2608.549 kb on + strand, within ECD_02492 at 2608.550 kb on - strand, within ECD_02492 at 2608.553 kb on + strand, within ECD_02492 at 2608.553 kb on + strand, within ECD_02492 at 2608.574 kb on + strand, within ECD_02492 at 2608.585 kb on + strand, within ECD_02492 at 2608.674 kb on + strand, within ECD_02492 at 2608.805 kb on + strand, within ECD_02492 at 2608.973 kb on + strand at 2608.973 kb on + strand at 2608.973 kb on + strand at 2608.977 kb on + strand at 2608.983 kb on + strand at 2609.080 kb on + strand, within ECD_02493 at 2609.177 kb on + strand, within ECD_02493 at 2609.185 kb on - strand, within ECD_02493 at 2609.185 kb on - strand, within ECD_02493 at 2609.216 kb on - strand, within ECD_02493 at 2609.239 kb on - strand, within ECD_02493
Per-strain Table
Position Strand Gene LocusTag Fraction EV116 remove 2,606,938 + ECD_02490 0.32 +0.8 2,606,941 - ECD_02490 0.32 -1.0 2,606,941 - ECD_02490 0.32 -2.0 2,606,941 - ECD_02490 0.32 +1.1 2,606,999 + ECD_02490 0.38 +0.8 2,607,000 - ECD_02490 0.38 -1.2 2,607,000 - ECD_02490 0.38 -2.3 2,607,071 - ECD_02490 0.45 +3.8 2,607,167 - ECD_02490 0.54 -1.2 2,607,191 - ECD_02490 0.56 -2.6 2,607,208 - ECD_02490 0.57 -1.8 2,607,208 - ECD_02490 0.57 -1.6 2,607,218 - ECD_02490 0.58 +0.1 2,607,306 - ECD_02490 0.66 -1.1 2,607,306 - ECD_02490 0.66 +0.0 2,607,338 - ECD_02490 0.69 -0.1 2,607,342 - ECD_02490 0.70 +0.3 2,607,399 + ECD_02490 0.75 -1.4 2,607,447 + ECD_02490 0.80 +0.6 2,607,447 + ECD_02490 0.80 -0.5 2,607,491 + ECD_02490 0.84 -1.4 2,607,491 + ECD_02490 0.84 -0.8 2,607,492 - ECD_02490 0.84 -0.1 2,607,492 - ECD_02490 0.84 +1.1 2,607,492 - ECD_02490 0.84 -1.5 2,607,492 - ECD_02490 0.84 -1.0 2,607,492 - ECD_02490 0.84 +0.4 2,607,492 - ECD_02490 0.84 -1.7 2,607,492 - ECD_02490 0.84 +0.5 2,607,492 - ECD_02490 0.84 +2.0 2,607,495 - ECD_02490 0.84 +0.2 2,607,527 - ECD_02490 0.87 +0.7 2,607,527 - ECD_02490 0.87 -0.6 2,607,634 + -0.7 2,607,634 + +0.1 2,607,634 + -1.3 2,607,635 - -0.6 2,607,635 - -0.2 2,607,635 - -1.2 2,607,635 - +0.6 2,607,635 - +1.0 2,607,638 + +0.8 2,607,639 - +1.4 2,607,639 - +1.1 2,607,639 - +0.4 2,607,639 - -1.3 2,607,639 - -2.7 2,607,680 + +1.1 2,607,681 - +1.2 2,607,721 - -0.7 2,607,786 + +0.4 2,607,787 - +1.1 2,607,937 + ECD_02491 0.17 -0.2 2,607,937 + ECD_02491 0.17 +0.1 2,607,938 - ECD_02491 0.17 +2.5 2,607,939 + ECD_02491 0.18 -1.6 2,607,939 + ECD_02491 0.18 -1.8 2,607,939 + ECD_02491 0.18 +2.1 2,607,940 - ECD_02491 0.18 +1.6 2,607,940 - ECD_02491 0.18 +0.5 2,607,940 - ECD_02491 0.18 +1.0 2,607,974 - ECD_02491 0.27 -2.0 2,607,974 - ECD_02491 0.27 +0.7 2,607,974 - ECD_02491 0.27 +0.2 2,607,974 - ECD_02491 0.27 +1.0 2,608,013 + ECD_02491 0.38 -2.5 2,608,013 + ECD_02491 0.38 +2.4 2,608,059 - ECD_02491 0.51 +1.9 2,608,059 - ECD_02491 0.51 -0.6 2,608,059 - ECD_02491 0.51 +1.4 2,608,059 - ECD_02491 0.51 +2.0 2,608,060 + ECD_02491 0.51 +0.5 2,608,061 - ECD_02491 0.51 -0.6 2,608,061 - ECD_02491 0.51 +0.6 2,608,061 - ECD_02491 0.51 -0.1 2,608,114 + ECD_02491 0.66 +1.4 2,608,115 - ECD_02491 0.66 +0.3 2,608,191 - ECD_02491 0.87 +1.3 2,608,330 + -1.3 2,608,414 + -0.8 2,608,447 + ECD_02492 0.11 +1.1 2,608,487 + ECD_02492 0.19 +1.9 2,608,487 + ECD_02492 0.19 +2.3 2,608,487 + ECD_02492 0.19 -0.8 2,608,488 - ECD_02492 0.19 -1.0 2,608,488 - ECD_02492 0.19 +2.1 2,608,488 - ECD_02492 0.19 +1.8 2,608,488 - ECD_02492 0.19 -1.0 2,608,512 + ECD_02492 0.24 +0.4 2,608,512 + ECD_02492 0.24 +0.6 2,608,549 + ECD_02492 0.31 +0.3 2,608,549 + ECD_02492 0.31 +1.5 2,608,549 + ECD_02492 0.31 +0.7 2,608,550 - ECD_02492 0.31 +0.4 2,608,553 + ECD_02492 0.32 -0.6 2,608,553 + ECD_02492 0.32 +0.9 2,608,574 + ECD_02492 0.36 +0.1 2,608,585 + ECD_02492 0.38 -0.1 2,608,674 + ECD_02492 0.55 -0.1 2,608,805 + ECD_02492 0.80 +0.0 2,608,973 + -1.0 2,608,973 + +0.4 2,608,973 + -1.2 2,608,977 + -0.0 2,608,983 + +0.0 2,609,080 + ECD_02493 0.15 +0.6 2,609,177 + ECD_02493 0.23 -0.4 2,609,185 - ECD_02493 0.23 -0.9 2,609,185 - ECD_02493 0.23 -0.5 2,609,216 - ECD_02493 0.26 +1.8 2,609,239 - ECD_02493 0.28 +2.0
Or see this region's nucleotide sequence