Strain Fitness in Escherichia coli BL21 around ECD_02491

Experiment: EV116

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02490 and ECD_02491 are separated by 209 nucleotidesECD_02491 and ECD_02492 are separated by 149 nucleotidesECD_02492 and ECD_02493 overlap by 11 nucleotides ECD_02490: ECD_02490 - 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible, at 2,606,594 to 2,607,664 _02490 ECD_02491: ECD_02491 - lipoprotein, at 2,607,874 to 2,608,239 _02491 ECD_02492: ECD_02492 - putative periplasmic inhibitor of YfiN activity, at 2,608,389 to 2,608,907 _02492 ECD_02493: ECD_02493 - putative membrane-anchored diguanylate cyclase, at 2,608,897 to 2,610,123 _02493 Position (kb) 2607 2608 2609Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 2606.938 kb on + strand, within ECD_02490at 2606.941 kb on - strand, within ECD_02490at 2606.941 kb on - strand, within ECD_02490at 2606.941 kb on - strand, within ECD_02490at 2606.999 kb on + strand, within ECD_02490at 2607.000 kb on - strand, within ECD_02490at 2607.000 kb on - strand, within ECD_02490at 2607.071 kb on - strand, within ECD_02490at 2607.167 kb on - strand, within ECD_02490at 2607.191 kb on - strand, within ECD_02490at 2607.208 kb on - strand, within ECD_02490at 2607.208 kb on - strand, within ECD_02490at 2607.218 kb on - strand, within ECD_02490at 2607.306 kb on - strand, within ECD_02490at 2607.306 kb on - strand, within ECD_02490at 2607.338 kb on - strand, within ECD_02490at 2607.342 kb on - strand, within ECD_02490at 2607.399 kb on + strand, within ECD_02490at 2607.447 kb on + strand, within ECD_02490at 2607.447 kb on + strand, within ECD_02490at 2607.491 kb on + strand, within ECD_02490at 2607.491 kb on + strand, within ECD_02490at 2607.492 kb on - strand, within ECD_02490at 2607.492 kb on - strand, within ECD_02490at 2607.492 kb on - strand, within ECD_02490at 2607.492 kb on - strand, within ECD_02490at 2607.492 kb on - strand, within ECD_02490at 2607.492 kb on - strand, within ECD_02490at 2607.492 kb on - strand, within ECD_02490at 2607.492 kb on - strand, within ECD_02490at 2607.495 kb on - strand, within ECD_02490at 2607.527 kb on - strand, within ECD_02490at 2607.527 kb on - strand, within ECD_02490at 2607.634 kb on + strandat 2607.634 kb on + strandat 2607.634 kb on + strandat 2607.635 kb on - strandat 2607.635 kb on - strandat 2607.635 kb on - strandat 2607.635 kb on - strandat 2607.635 kb on - strandat 2607.638 kb on + strandat 2607.639 kb on - strandat 2607.639 kb on - strandat 2607.639 kb on - strandat 2607.639 kb on - strandat 2607.639 kb on - strandat 2607.680 kb on + strandat 2607.681 kb on - strandat 2607.721 kb on - strandat 2607.786 kb on + strandat 2607.787 kb on - strandat 2607.937 kb on + strand, within ECD_02491at 2607.937 kb on + strand, within ECD_02491at 2607.938 kb on - strand, within ECD_02491at 2607.939 kb on + strand, within ECD_02491at 2607.939 kb on + strand, within ECD_02491at 2607.939 kb on + strand, within ECD_02491at 2607.940 kb on - strand, within ECD_02491at 2607.940 kb on - strand, within ECD_02491at 2607.940 kb on - strand, within ECD_02491at 2607.974 kb on - strand, within ECD_02491at 2607.974 kb on - strand, within ECD_02491at 2607.974 kb on - strand, within ECD_02491at 2607.974 kb on - strand, within ECD_02491at 2608.013 kb on + strand, within ECD_02491at 2608.013 kb on + strand, within ECD_02491at 2608.059 kb on - strand, within ECD_02491at 2608.059 kb on - strand, within ECD_02491at 2608.059 kb on - strand, within ECD_02491at 2608.059 kb on - strand, within ECD_02491at 2608.060 kb on + strand, within ECD_02491at 2608.061 kb on - strand, within ECD_02491at 2608.061 kb on - strand, within ECD_02491at 2608.061 kb on - strand, within ECD_02491at 2608.114 kb on + strand, within ECD_02491at 2608.115 kb on - strand, within ECD_02491at 2608.191 kb on - strand, within ECD_02491at 2608.330 kb on + strandat 2608.414 kb on + strandat 2608.447 kb on + strand, within ECD_02492at 2608.487 kb on + strand, within ECD_02492at 2608.487 kb on + strand, within ECD_02492at 2608.487 kb on + strand, within ECD_02492at 2608.488 kb on - strand, within ECD_02492at 2608.488 kb on - strand, within ECD_02492at 2608.488 kb on - strand, within ECD_02492at 2608.488 kb on - strand, within ECD_02492at 2608.512 kb on + strand, within ECD_02492at 2608.512 kb on + strand, within ECD_02492at 2608.549 kb on + strand, within ECD_02492at 2608.549 kb on + strand, within ECD_02492at 2608.549 kb on + strand, within ECD_02492at 2608.550 kb on - strand, within ECD_02492at 2608.553 kb on + strand, within ECD_02492at 2608.553 kb on + strand, within ECD_02492at 2608.574 kb on + strand, within ECD_02492at 2608.585 kb on + strand, within ECD_02492at 2608.674 kb on + strand, within ECD_02492at 2608.805 kb on + strand, within ECD_02492at 2608.973 kb on + strandat 2608.973 kb on + strandat 2608.973 kb on + strandat 2608.977 kb on + strandat 2608.983 kb on + strandat 2609.080 kb on + strand, within ECD_02493at 2609.177 kb on + strand, within ECD_02493at 2609.185 kb on - strand, within ECD_02493at 2609.185 kb on - strand, within ECD_02493at 2609.216 kb on - strand, within ECD_02493at 2609.239 kb on - strand, within ECD_02493

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Per-strain Table

Position Strand Gene LocusTag Fraction EV116
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2,606,938 + ECD_02490 0.32 +0.8
2,606,941 - ECD_02490 0.32 -1.0
2,606,941 - ECD_02490 0.32 -2.0
2,606,941 - ECD_02490 0.32 +1.1
2,606,999 + ECD_02490 0.38 +0.8
2,607,000 - ECD_02490 0.38 -1.2
2,607,000 - ECD_02490 0.38 -2.3
2,607,071 - ECD_02490 0.45 +3.8
2,607,167 - ECD_02490 0.54 -1.2
2,607,191 - ECD_02490 0.56 -2.6
2,607,208 - ECD_02490 0.57 -1.8
2,607,208 - ECD_02490 0.57 -1.6
2,607,218 - ECD_02490 0.58 +0.1
2,607,306 - ECD_02490 0.66 -1.1
2,607,306 - ECD_02490 0.66 +0.0
2,607,338 - ECD_02490 0.69 -0.1
2,607,342 - ECD_02490 0.70 +0.3
2,607,399 + ECD_02490 0.75 -1.4
2,607,447 + ECD_02490 0.80 +0.6
2,607,447 + ECD_02490 0.80 -0.5
2,607,491 + ECD_02490 0.84 -1.4
2,607,491 + ECD_02490 0.84 -0.8
2,607,492 - ECD_02490 0.84 -0.1
2,607,492 - ECD_02490 0.84 +1.1
2,607,492 - ECD_02490 0.84 -1.5
2,607,492 - ECD_02490 0.84 -1.0
2,607,492 - ECD_02490 0.84 +0.4
2,607,492 - ECD_02490 0.84 -1.7
2,607,492 - ECD_02490 0.84 +0.5
2,607,492 - ECD_02490 0.84 +2.0
2,607,495 - ECD_02490 0.84 +0.2
2,607,527 - ECD_02490 0.87 +0.7
2,607,527 - ECD_02490 0.87 -0.6
2,607,634 + -0.7
2,607,634 + +0.1
2,607,634 + -1.3
2,607,635 - -0.6
2,607,635 - -0.2
2,607,635 - -1.2
2,607,635 - +0.6
2,607,635 - +1.0
2,607,638 + +0.8
2,607,639 - +1.4
2,607,639 - +1.1
2,607,639 - +0.4
2,607,639 - -1.3
2,607,639 - -2.7
2,607,680 + +1.1
2,607,681 - +1.2
2,607,721 - -0.7
2,607,786 + +0.4
2,607,787 - +1.1
2,607,937 + ECD_02491 0.17 -0.2
2,607,937 + ECD_02491 0.17 +0.1
2,607,938 - ECD_02491 0.17 +2.5
2,607,939 + ECD_02491 0.18 -1.6
2,607,939 + ECD_02491 0.18 -1.8
2,607,939 + ECD_02491 0.18 +2.1
2,607,940 - ECD_02491 0.18 +1.6
2,607,940 - ECD_02491 0.18 +0.5
2,607,940 - ECD_02491 0.18 +1.0
2,607,974 - ECD_02491 0.27 -2.0
2,607,974 - ECD_02491 0.27 +0.7
2,607,974 - ECD_02491 0.27 +0.2
2,607,974 - ECD_02491 0.27 +1.0
2,608,013 + ECD_02491 0.38 -2.5
2,608,013 + ECD_02491 0.38 +2.4
2,608,059 - ECD_02491 0.51 +1.9
2,608,059 - ECD_02491 0.51 -0.6
2,608,059 - ECD_02491 0.51 +1.4
2,608,059 - ECD_02491 0.51 +2.0
2,608,060 + ECD_02491 0.51 +0.5
2,608,061 - ECD_02491 0.51 -0.6
2,608,061 - ECD_02491 0.51 +0.6
2,608,061 - ECD_02491 0.51 -0.1
2,608,114 + ECD_02491 0.66 +1.4
2,608,115 - ECD_02491 0.66 +0.3
2,608,191 - ECD_02491 0.87 +1.3
2,608,330 + -1.3
2,608,414 + -0.8
2,608,447 + ECD_02492 0.11 +1.1
2,608,487 + ECD_02492 0.19 +1.9
2,608,487 + ECD_02492 0.19 +2.3
2,608,487 + ECD_02492 0.19 -0.8
2,608,488 - ECD_02492 0.19 -1.0
2,608,488 - ECD_02492 0.19 +2.1
2,608,488 - ECD_02492 0.19 +1.8
2,608,488 - ECD_02492 0.19 -1.0
2,608,512 + ECD_02492 0.24 +0.4
2,608,512 + ECD_02492 0.24 +0.6
2,608,549 + ECD_02492 0.31 +0.3
2,608,549 + ECD_02492 0.31 +1.5
2,608,549 + ECD_02492 0.31 +0.7
2,608,550 - ECD_02492 0.31 +0.4
2,608,553 + ECD_02492 0.32 -0.6
2,608,553 + ECD_02492 0.32 +0.9
2,608,574 + ECD_02492 0.36 +0.1
2,608,585 + ECD_02492 0.38 -0.1
2,608,674 + ECD_02492 0.55 -0.1
2,608,805 + ECD_02492 0.80 +0.0
2,608,973 + -1.0
2,608,973 + +0.4
2,608,973 + -1.2
2,608,977 + -0.0
2,608,983 + +0.0
2,609,080 + ECD_02493 0.15 +0.6
2,609,177 + ECD_02493 0.23 -0.4
2,609,185 - ECD_02493 0.23 -0.9
2,609,185 - ECD_02493 0.23 -0.5
2,609,216 - ECD_02493 0.26 +1.8
2,609,239 - ECD_02493 0.28 +2.0

Or see this region's nucleotide sequence