Strain Fitness in Escherichia coli BL21 around ECD_02483

Experiment: EV116

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02482 and ECD_02483 are separated by 129 nucleotidesECD_02483 and ECD_02484 overlap by 4 nucleotides ECD_02482: ECD_02482 - protein disaggregation chaperone, at 2,598,115 to 2,600,688 _02482 ECD_02483: ECD_02483 - UPF0124 family protein, at 2,600,818 to 2,601,549 _02483 ECD_02484: ECD_02484 - 23S rRNA pseudouridine(1911,1915,1917) synthase, at 2,601,546 to 2,602,526 _02484 Position (kb) 2600 2601 2602Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2599.845 kb on + strand, within ECD_02482at 2599.845 kb on + strand, within ECD_02482at 2599.845 kb on + strand, within ECD_02482at 2599.846 kb on - strand, within ECD_02482at 2599.846 kb on - strand, within ECD_02482at 2599.846 kb on - strand, within ECD_02482at 2599.846 kb on - strand, within ECD_02482at 2599.846 kb on - strand, within ECD_02482at 2599.846 kb on - strand, within ECD_02482at 2599.850 kb on - strand, within ECD_02482at 2599.850 kb on - strand, within ECD_02482at 2600.019 kb on + strand, within ECD_02482at 2600.020 kb on - strand, within ECD_02482at 2600.022 kb on + strand, within ECD_02482at 2600.089 kb on - strand, within ECD_02482at 2600.095 kb on - strand, within ECD_02482at 2600.197 kb on - strand, within ECD_02482at 2600.280 kb on + strand, within ECD_02482at 2600.281 kb on - strand, within ECD_02482at 2600.281 kb on - strand, within ECD_02482at 2600.281 kb on - strand, within ECD_02482at 2600.373 kb on + strand, within ECD_02482at 2600.373 kb on + strand, within ECD_02482at 2600.374 kb on - strand, within ECD_02482at 2600.380 kb on - strand, within ECD_02482at 2600.380 kb on - strand, within ECD_02482at 2600.380 kb on - strand, within ECD_02482at 2600.415 kb on + strand, within ECD_02482at 2600.486 kb on - strandat 2600.486 kb on - strandat 2600.500 kb on - strandat 2600.524 kb on + strandat 2600.668 kb on - strandat 2600.728 kb on - strandat 2600.820 kb on - strandat 2600.898 kb on - strand, within ECD_02483at 2600.898 kb on - strand, within ECD_02483at 2600.901 kb on + strand, within ECD_02483at 2600.901 kb on + strand, within ECD_02483at 2600.901 kb on + strand, within ECD_02483at 2600.902 kb on - strand, within ECD_02483at 2600.902 kb on - strand, within ECD_02483at 2600.902 kb on - strand, within ECD_02483at 2600.902 kb on - strand, within ECD_02483at 2600.902 kb on - strand, within ECD_02483at 2600.967 kb on - strand, within ECD_02483at 2600.967 kb on - strand, within ECD_02483at 2600.982 kb on - strand, within ECD_02483at 2600.982 kb on - strand, within ECD_02483at 2600.986 kb on - strand, within ECD_02483at 2600.986 kb on - strand, within ECD_02483at 2601.010 kb on - strand, within ECD_02483at 2601.118 kb on - strand, within ECD_02483at 2601.268 kb on - strand, within ECD_02483at 2601.268 kb on - strand, within ECD_02483at 2601.274 kb on - strand, within ECD_02483at 2601.274 kb on - strand, within ECD_02483at 2601.275 kb on + strand, within ECD_02483at 2601.276 kb on - strand, within ECD_02483at 2601.276 kb on - strand, within ECD_02483at 2601.302 kb on + strand, within ECD_02483at 2601.303 kb on - strand, within ECD_02483at 2601.340 kb on + strand, within ECD_02483at 2601.364 kb on - strand, within ECD_02483at 2601.484 kb on - strandat 2601.495 kb on + strandat 2601.550 kb on - strandat 2601.569 kb on + strandat 2601.569 kb on + strandat 2601.570 kb on - strandat 2601.570 kb on - strandat 2601.615 kb on - strandat 2601.691 kb on - strand, within ECD_02484at 2601.691 kb on - strand, within ECD_02484at 2601.711 kb on - strand, within ECD_02484at 2601.725 kb on + strand, within ECD_02484at 2601.725 kb on + strand, within ECD_02484at 2601.725 kb on + strand, within ECD_02484at 2601.726 kb on - strand, within ECD_02484at 2601.770 kb on - strand, within ECD_02484at 2601.809 kb on + strand, within ECD_02484at 2601.810 kb on - strand, within ECD_02484at 2601.830 kb on + strand, within ECD_02484at 2601.992 kb on + strand, within ECD_02484at 2601.992 kb on + strand, within ECD_02484at 2601.993 kb on - strand, within ECD_02484at 2602.026 kb on - strand, within ECD_02484at 2602.140 kb on + strand, within ECD_02484at 2602.160 kb on - strand, within ECD_02484at 2602.162 kb on + strand, within ECD_02484at 2602.163 kb on - strand, within ECD_02484at 2602.216 kb on - strand, within ECD_02484at 2602.216 kb on - strand, within ECD_02484at 2602.236 kb on - strand, within ECD_02484at 2602.236 kb on - strand, within ECD_02484at 2602.248 kb on - strand, within ECD_02484at 2602.248 kb on - strand, within ECD_02484at 2602.264 kb on + strand, within ECD_02484at 2602.368 kb on - strand, within ECD_02484at 2602.467 kb on + strandat 2602.467 kb on + strandat 2602.467 kb on + strandat 2602.467 kb on + strandat 2602.468 kb on - strandat 2602.468 kb on - strandat 2602.468 kb on - strandat 2602.468 kb on - strandat 2602.513 kb on - strandat 2602.513 kb on - strandat 2602.513 kb on - strandat 2602.526 kb on + strandat 2602.526 kb on + strandat 2602.527 kb on - strandat 2602.527 kb on - strandat 2602.527 kb on - strandat 2602.527 kb on - strandat 2602.527 kb on - strandat 2602.528 kb on + strandat 2602.529 kb on - strandat 2602.529 kb on - strandat 2602.529 kb on - strandat 2602.529 kb on - strandat 2602.529 kb on - strandat 2602.529 kb on - strandat 2602.530 kb on + strandat 2602.530 kb on + strandat 2602.530 kb on + strandat 2602.531 kb on - strandat 2602.531 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction EV116
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2,599,845 + ECD_02482 0.67 +1.7
2,599,845 + ECD_02482 0.67 -1.5
2,599,845 + ECD_02482 0.67 -0.7
2,599,846 - ECD_02482 0.67 +0.7
2,599,846 - ECD_02482 0.67 +0.1
2,599,846 - ECD_02482 0.67 -0.6
2,599,846 - ECD_02482 0.67 +0.1
2,599,846 - ECD_02482 0.67 -0.6
2,599,846 - ECD_02482 0.67 -0.6
2,599,850 - ECD_02482 0.67 -0.7
2,599,850 - ECD_02482 0.67 +0.2
2,600,019 + ECD_02482 0.74 +1.5
2,600,020 - ECD_02482 0.74 +0.2
2,600,022 + ECD_02482 0.74 +1.3
2,600,089 - ECD_02482 0.77 -0.5
2,600,095 - ECD_02482 0.77 +1.4
2,600,197 - ECD_02482 0.81 +1.8
2,600,280 + ECD_02482 0.84 +2.2
2,600,281 - ECD_02482 0.84 +2.3
2,600,281 - ECD_02482 0.84 +1.9
2,600,281 - ECD_02482 0.84 -1.0
2,600,373 + ECD_02482 0.88 +0.4
2,600,373 + ECD_02482 0.88 -1.6
2,600,374 - ECD_02482 0.88 -0.2
2,600,380 - ECD_02482 0.88 -0.8
2,600,380 - ECD_02482 0.88 -0.2
2,600,380 - ECD_02482 0.88 -0.1
2,600,415 + ECD_02482 0.89 +1.2
2,600,486 - -0.2
2,600,486 - -1.2
2,600,500 - +0.3
2,600,524 + +1.3
2,600,668 - +0.7
2,600,728 - +0.8
2,600,820 - +1.3
2,600,898 - ECD_02483 0.11 -1.3
2,600,898 - ECD_02483 0.11 -2.0
2,600,901 + ECD_02483 0.11 -0.6
2,600,901 + ECD_02483 0.11 -0.1
2,600,901 + ECD_02483 0.11 +1.6
2,600,902 - ECD_02483 0.11 +0.2
2,600,902 - ECD_02483 0.11 -1.1
2,600,902 - ECD_02483 0.11 -0.9
2,600,902 - ECD_02483 0.11 -0.8
2,600,902 - ECD_02483 0.11 -0.2
2,600,967 - ECD_02483 0.20 -0.0
2,600,967 - ECD_02483 0.20 -1.2
2,600,982 - ECD_02483 0.22 -0.3
2,600,982 - ECD_02483 0.22 -0.7
2,600,986 - ECD_02483 0.23 -1.4
2,600,986 - ECD_02483 0.23 -0.1
2,601,010 - ECD_02483 0.26 -1.7
2,601,118 - ECD_02483 0.41 -0.9
2,601,268 - ECD_02483 0.61 -0.6
2,601,268 - ECD_02483 0.61 +0.2
2,601,274 - ECD_02483 0.62 -0.4
2,601,274 - ECD_02483 0.62 +0.2
2,601,275 + ECD_02483 0.62 +1.2
2,601,276 - ECD_02483 0.63 -1.4
2,601,276 - ECD_02483 0.63 +0.4
2,601,302 + ECD_02483 0.66 -0.7
2,601,303 - ECD_02483 0.66 -1.2
2,601,340 + ECD_02483 0.71 -1.9
2,601,364 - ECD_02483 0.75 +0.2
2,601,484 - -0.1
2,601,495 + -0.4
2,601,550 - +1.3
2,601,569 + +0.4
2,601,569 + -1.1
2,601,570 - -1.1
2,601,570 - +0.9
2,601,615 - +0.0
2,601,691 - ECD_02484 0.15 -1.9
2,601,691 - ECD_02484 0.15 -0.6
2,601,711 - ECD_02484 0.17 -0.2
2,601,725 + ECD_02484 0.18 -1.2
2,601,725 + ECD_02484 0.18 -2.0
2,601,725 + ECD_02484 0.18 -0.9
2,601,726 - ECD_02484 0.18 +0.9
2,601,770 - ECD_02484 0.23 -0.1
2,601,809 + ECD_02484 0.27 -1.7
2,601,810 - ECD_02484 0.27 -2.6
2,601,830 + ECD_02484 0.29 -1.5
2,601,992 + ECD_02484 0.45 -0.2
2,601,992 + ECD_02484 0.45 +0.4
2,601,993 - ECD_02484 0.46 -0.6
2,602,026 - ECD_02484 0.49 -2.6
2,602,140 + ECD_02484 0.61 -1.5
2,602,160 - ECD_02484 0.63 -1.5
2,602,162 + ECD_02484 0.63 -0.1
2,602,163 - ECD_02484 0.63 -0.7
2,602,216 - ECD_02484 0.68 +1.2
2,602,216 - ECD_02484 0.68 -1.8
2,602,236 - ECD_02484 0.70 -1.5
2,602,236 - ECD_02484 0.70 -0.1
2,602,248 - ECD_02484 0.72 -1.1
2,602,248 - ECD_02484 0.72 -2.0
2,602,264 + ECD_02484 0.73 -0.6
2,602,368 - ECD_02484 0.84 -2.0
2,602,467 + -0.1
2,602,467 + -2.7
2,602,467 + -1.0
2,602,467 + -1.3
2,602,468 - -1.0
2,602,468 - -1.4
2,602,468 - -1.0
2,602,468 - -0.9
2,602,513 - +0.6
2,602,513 - -1.6
2,602,513 - -2.2
2,602,526 + -1.7
2,602,526 + -2.4
2,602,527 - -2.6
2,602,527 - -0.6
2,602,527 - -1.4
2,602,527 - -0.6
2,602,527 - +0.9
2,602,528 + -2.0
2,602,529 - -1.2
2,602,529 - -3.3
2,602,529 - -2.2
2,602,529 - -2.7
2,602,529 - -1.5
2,602,529 - +0.2
2,602,530 + -0.6
2,602,530 + -1.1
2,602,530 + -1.1
2,602,531 - -2.1
2,602,531 - -1.4

Or see this region's nucleotide sequence