Experiment: EV116
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02482 and ECD_02483 are separated by 129 nucleotides ECD_02483 and ECD_02484 overlap by 4 nucleotides
ECD_02482: ECD_02482 - protein disaggregation chaperone, at 2,598,115 to 2,600,688
_02482
ECD_02483: ECD_02483 - UPF0124 family protein, at 2,600,818 to 2,601,549
_02483
ECD_02484: ECD_02484 - 23S rRNA pseudouridine(1911,1915,1917) synthase, at 2,601,546 to 2,602,526
_02484
Position (kb)
2600
2601
2602 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2599.845 kb on + strand, within ECD_02482 at 2599.845 kb on + strand, within ECD_02482 at 2599.845 kb on + strand, within ECD_02482 at 2599.846 kb on - strand, within ECD_02482 at 2599.846 kb on - strand, within ECD_02482 at 2599.846 kb on - strand, within ECD_02482 at 2599.846 kb on - strand, within ECD_02482 at 2599.846 kb on - strand, within ECD_02482 at 2599.846 kb on - strand, within ECD_02482 at 2599.850 kb on - strand, within ECD_02482 at 2599.850 kb on - strand, within ECD_02482 at 2600.019 kb on + strand, within ECD_02482 at 2600.020 kb on - strand, within ECD_02482 at 2600.022 kb on + strand, within ECD_02482 at 2600.089 kb on - strand, within ECD_02482 at 2600.095 kb on - strand, within ECD_02482 at 2600.197 kb on - strand, within ECD_02482 at 2600.280 kb on + strand, within ECD_02482 at 2600.281 kb on - strand, within ECD_02482 at 2600.281 kb on - strand, within ECD_02482 at 2600.281 kb on - strand, within ECD_02482 at 2600.373 kb on + strand, within ECD_02482 at 2600.373 kb on + strand, within ECD_02482 at 2600.374 kb on - strand, within ECD_02482 at 2600.380 kb on - strand, within ECD_02482 at 2600.380 kb on - strand, within ECD_02482 at 2600.380 kb on - strand, within ECD_02482 at 2600.415 kb on + strand, within ECD_02482 at 2600.486 kb on - strand at 2600.486 kb on - strand at 2600.500 kb on - strand at 2600.524 kb on + strand at 2600.668 kb on - strand at 2600.728 kb on - strand at 2600.820 kb on - strand at 2600.898 kb on - strand, within ECD_02483 at 2600.898 kb on - strand, within ECD_02483 at 2600.901 kb on + strand, within ECD_02483 at 2600.901 kb on + strand, within ECD_02483 at 2600.901 kb on + strand, within ECD_02483 at 2600.902 kb on - strand, within ECD_02483 at 2600.902 kb on - strand, within ECD_02483 at 2600.902 kb on - strand, within ECD_02483 at 2600.902 kb on - strand, within ECD_02483 at 2600.902 kb on - strand, within ECD_02483 at 2600.967 kb on - strand, within ECD_02483 at 2600.967 kb on - strand, within ECD_02483 at 2600.982 kb on - strand, within ECD_02483 at 2600.982 kb on - strand, within ECD_02483 at 2600.986 kb on - strand, within ECD_02483 at 2600.986 kb on - strand, within ECD_02483 at 2601.010 kb on - strand, within ECD_02483 at 2601.118 kb on - strand, within ECD_02483 at 2601.268 kb on - strand, within ECD_02483 at 2601.268 kb on - strand, within ECD_02483 at 2601.274 kb on - strand, within ECD_02483 at 2601.274 kb on - strand, within ECD_02483 at 2601.275 kb on + strand, within ECD_02483 at 2601.276 kb on - strand, within ECD_02483 at 2601.276 kb on - strand, within ECD_02483 at 2601.302 kb on + strand, within ECD_02483 at 2601.303 kb on - strand, within ECD_02483 at 2601.340 kb on + strand, within ECD_02483 at 2601.364 kb on - strand, within ECD_02483 at 2601.484 kb on - strand at 2601.495 kb on + strand at 2601.550 kb on - strand at 2601.569 kb on + strand at 2601.569 kb on + strand at 2601.570 kb on - strand at 2601.570 kb on - strand at 2601.615 kb on - strand at 2601.691 kb on - strand, within ECD_02484 at 2601.691 kb on - strand, within ECD_02484 at 2601.711 kb on - strand, within ECD_02484 at 2601.725 kb on + strand, within ECD_02484 at 2601.725 kb on + strand, within ECD_02484 at 2601.725 kb on + strand, within ECD_02484 at 2601.726 kb on - strand, within ECD_02484 at 2601.770 kb on - strand, within ECD_02484 at 2601.809 kb on + strand, within ECD_02484 at 2601.810 kb on - strand, within ECD_02484 at 2601.830 kb on + strand, within ECD_02484 at 2601.992 kb on + strand, within ECD_02484 at 2601.992 kb on + strand, within ECD_02484 at 2601.993 kb on - strand, within ECD_02484 at 2602.026 kb on - strand, within ECD_02484 at 2602.140 kb on + strand, within ECD_02484 at 2602.160 kb on - strand, within ECD_02484 at 2602.162 kb on + strand, within ECD_02484 at 2602.163 kb on - strand, within ECD_02484 at 2602.216 kb on - strand, within ECD_02484 at 2602.216 kb on - strand, within ECD_02484 at 2602.236 kb on - strand, within ECD_02484 at 2602.236 kb on - strand, within ECD_02484 at 2602.248 kb on - strand, within ECD_02484 at 2602.248 kb on - strand, within ECD_02484 at 2602.264 kb on + strand, within ECD_02484 at 2602.368 kb on - strand, within ECD_02484 at 2602.467 kb on + strand at 2602.467 kb on + strand at 2602.467 kb on + strand at 2602.467 kb on + strand at 2602.468 kb on - strand at 2602.468 kb on - strand at 2602.468 kb on - strand at 2602.468 kb on - strand at 2602.513 kb on - strand at 2602.513 kb on - strand at 2602.513 kb on - strand at 2602.526 kb on + strand at 2602.526 kb on + strand at 2602.527 kb on - strand at 2602.527 kb on - strand at 2602.527 kb on - strand at 2602.527 kb on - strand at 2602.527 kb on - strand at 2602.528 kb on + strand at 2602.529 kb on - strand at 2602.529 kb on - strand at 2602.529 kb on - strand at 2602.529 kb on - strand at 2602.529 kb on - strand at 2602.529 kb on - strand at 2602.530 kb on + strand at 2602.530 kb on + strand at 2602.530 kb on + strand at 2602.531 kb on - strand at 2602.531 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction EV116 remove 2,599,845 + ECD_02482 0.67 +1.7 2,599,845 + ECD_02482 0.67 -1.5 2,599,845 + ECD_02482 0.67 -0.7 2,599,846 - ECD_02482 0.67 +0.7 2,599,846 - ECD_02482 0.67 +0.1 2,599,846 - ECD_02482 0.67 -0.6 2,599,846 - ECD_02482 0.67 +0.1 2,599,846 - ECD_02482 0.67 -0.6 2,599,846 - ECD_02482 0.67 -0.6 2,599,850 - ECD_02482 0.67 -0.7 2,599,850 - ECD_02482 0.67 +0.2 2,600,019 + ECD_02482 0.74 +1.5 2,600,020 - ECD_02482 0.74 +0.2 2,600,022 + ECD_02482 0.74 +1.3 2,600,089 - ECD_02482 0.77 -0.5 2,600,095 - ECD_02482 0.77 +1.4 2,600,197 - ECD_02482 0.81 +1.8 2,600,280 + ECD_02482 0.84 +2.2 2,600,281 - ECD_02482 0.84 +2.3 2,600,281 - ECD_02482 0.84 +1.9 2,600,281 - ECD_02482 0.84 -1.0 2,600,373 + ECD_02482 0.88 +0.4 2,600,373 + ECD_02482 0.88 -1.6 2,600,374 - ECD_02482 0.88 -0.2 2,600,380 - ECD_02482 0.88 -0.8 2,600,380 - ECD_02482 0.88 -0.2 2,600,380 - ECD_02482 0.88 -0.1 2,600,415 + ECD_02482 0.89 +1.2 2,600,486 - -0.2 2,600,486 - -1.2 2,600,500 - +0.3 2,600,524 + +1.3 2,600,668 - +0.7 2,600,728 - +0.8 2,600,820 - +1.3 2,600,898 - ECD_02483 0.11 -1.3 2,600,898 - ECD_02483 0.11 -2.0 2,600,901 + ECD_02483 0.11 -0.6 2,600,901 + ECD_02483 0.11 -0.1 2,600,901 + ECD_02483 0.11 +1.6 2,600,902 - ECD_02483 0.11 +0.2 2,600,902 - ECD_02483 0.11 -1.1 2,600,902 - ECD_02483 0.11 -0.9 2,600,902 - ECD_02483 0.11 -0.8 2,600,902 - ECD_02483 0.11 -0.2 2,600,967 - ECD_02483 0.20 -0.0 2,600,967 - ECD_02483 0.20 -1.2 2,600,982 - ECD_02483 0.22 -0.3 2,600,982 - ECD_02483 0.22 -0.7 2,600,986 - ECD_02483 0.23 -1.4 2,600,986 - ECD_02483 0.23 -0.1 2,601,010 - ECD_02483 0.26 -1.7 2,601,118 - ECD_02483 0.41 -0.9 2,601,268 - ECD_02483 0.61 -0.6 2,601,268 - ECD_02483 0.61 +0.2 2,601,274 - ECD_02483 0.62 -0.4 2,601,274 - ECD_02483 0.62 +0.2 2,601,275 + ECD_02483 0.62 +1.2 2,601,276 - ECD_02483 0.63 -1.4 2,601,276 - ECD_02483 0.63 +0.4 2,601,302 + ECD_02483 0.66 -0.7 2,601,303 - ECD_02483 0.66 -1.2 2,601,340 + ECD_02483 0.71 -1.9 2,601,364 - ECD_02483 0.75 +0.2 2,601,484 - -0.1 2,601,495 + -0.4 2,601,550 - +1.3 2,601,569 + +0.4 2,601,569 + -1.1 2,601,570 - -1.1 2,601,570 - +0.9 2,601,615 - +0.0 2,601,691 - ECD_02484 0.15 -1.9 2,601,691 - ECD_02484 0.15 -0.6 2,601,711 - ECD_02484 0.17 -0.2 2,601,725 + ECD_02484 0.18 -1.2 2,601,725 + ECD_02484 0.18 -2.0 2,601,725 + ECD_02484 0.18 -0.9 2,601,726 - ECD_02484 0.18 +0.9 2,601,770 - ECD_02484 0.23 -0.1 2,601,809 + ECD_02484 0.27 -1.7 2,601,810 - ECD_02484 0.27 -2.6 2,601,830 + ECD_02484 0.29 -1.5 2,601,992 + ECD_02484 0.45 -0.2 2,601,992 + ECD_02484 0.45 +0.4 2,601,993 - ECD_02484 0.46 -0.6 2,602,026 - ECD_02484 0.49 -2.6 2,602,140 + ECD_02484 0.61 -1.5 2,602,160 - ECD_02484 0.63 -1.5 2,602,162 + ECD_02484 0.63 -0.1 2,602,163 - ECD_02484 0.63 -0.7 2,602,216 - ECD_02484 0.68 +1.2 2,602,216 - ECD_02484 0.68 -1.8 2,602,236 - ECD_02484 0.70 -1.5 2,602,236 - ECD_02484 0.70 -0.1 2,602,248 - ECD_02484 0.72 -1.1 2,602,248 - ECD_02484 0.72 -2.0 2,602,264 + ECD_02484 0.73 -0.6 2,602,368 - ECD_02484 0.84 -2.0 2,602,467 + -0.1 2,602,467 + -2.7 2,602,467 + -1.0 2,602,467 + -1.3 2,602,468 - -1.0 2,602,468 - -1.4 2,602,468 - -1.0 2,602,468 - -0.9 2,602,513 - +0.6 2,602,513 - -1.6 2,602,513 - -2.2 2,602,526 + -1.7 2,602,526 + -2.4 2,602,527 - -2.6 2,602,527 - -0.6 2,602,527 - -1.4 2,602,527 - -0.6 2,602,527 - +0.9 2,602,528 + -2.0 2,602,529 - -1.2 2,602,529 - -3.3 2,602,529 - -2.2 2,602,529 - -2.7 2,602,529 - -1.5 2,602,529 - +0.2 2,602,530 + -0.6 2,602,530 + -1.1 2,602,530 + -1.1 2,602,531 - -2.1 2,602,531 - -1.4
Or see this region's nucleotide sequence