Experiment: EV116
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02411 and ECD_02412 are separated by 0 nucleotides ECD_02412 and ECD_02413 are separated by 206 nucleotides
ECD_02411: ECD_02411 - penicillin-insensitive murein repair transglycosylase; inactive transpeptidase domain protein, at 2,509,493 to 2,511,805
_02411
ECD_02412: ECD_02412 - bacterial alpha2-macroglobulin colonization factor ECAM; anti-host protease defense factor; periplasmic inner membrane-anchored lipoprotein, at 2,511,806 to 2,516,767
_02412
ECD_02413: ECD_02413 - 3-mercaptopyruvate sulfurtransferase, at 2,516,974 to 2,517,819
_02413
Position (kb)
2511
2512
2513
2514
2515
2516
2517 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2510.983 kb on + strand, within ECD_02411 at 2510.984 kb on - strand, within ECD_02411 at 2510.984 kb on - strand, within ECD_02411 at 2510.984 kb on - strand, within ECD_02411 at 2510.984 kb on - strand, within ECD_02411 at 2510.984 kb on - strand, within ECD_02411 at 2510.984 kb on - strand, within ECD_02411 at 2511.146 kb on - strand, within ECD_02411 at 2511.237 kb on + strand, within ECD_02411 at 2511.268 kb on - strand, within ECD_02411 at 2511.327 kb on + strand, within ECD_02411 at 2511.327 kb on + strand, within ECD_02411 at 2511.470 kb on - strand, within ECD_02411 at 2511.559 kb on - strand, within ECD_02411 at 2511.579 kb on + strand at 2511.580 kb on - strand at 2511.807 kb on + strand at 2511.808 kb on - strand at 2511.808 kb on - strand at 2511.808 kb on - strand at 2511.864 kb on + strand at 2511.864 kb on + strand at 2511.864 kb on + strand at 2511.865 kb on - strand at 2511.865 kb on - strand at 2511.865 kb on - strand at 2511.897 kb on + strand at 2512.192 kb on + strand at 2512.219 kb on + strand at 2512.220 kb on - strand at 2512.229 kb on - strand at 2512.237 kb on + strand at 2512.460 kb on - strand, within ECD_02412 at 2512.548 kb on + strand, within ECD_02412 at 2512.548 kb on + strand, within ECD_02412 at 2512.618 kb on + strand, within ECD_02412 at 2512.619 kb on - strand, within ECD_02412 at 2512.619 kb on - strand, within ECD_02412 at 2512.908 kb on - strand, within ECD_02412 at 2512.912 kb on - strand, within ECD_02412 at 2513.001 kb on + strand, within ECD_02412 at 2513.002 kb on - strand, within ECD_02412 at 2513.170 kb on - strand, within ECD_02412 at 2513.240 kb on - strand, within ECD_02412 at 2513.420 kb on - strand, within ECD_02412 at 2513.524 kb on + strand, within ECD_02412 at 2513.524 kb on + strand, within ECD_02412 at 2513.525 kb on - strand, within ECD_02412 at 2513.525 kb on - strand, within ECD_02412 at 2513.527 kb on + strand, within ECD_02412 at 2513.636 kb on - strand, within ECD_02412 at 2513.636 kb on - strand, within ECD_02412 at 2513.677 kb on + strand, within ECD_02412 at 2513.720 kb on + strand, within ECD_02412 at 2513.870 kb on - strand, within ECD_02412 at 2513.870 kb on - strand, within ECD_02412 at 2513.963 kb on - strand, within ECD_02412 at 2513.974 kb on - strand, within ECD_02412 at 2514.042 kb on + strand, within ECD_02412 at 2514.043 kb on - strand, within ECD_02412 at 2514.050 kb on - strand, within ECD_02412 at 2514.052 kb on + strand, within ECD_02412 at 2514.278 kb on + strand, within ECD_02412 at 2514.278 kb on + strand, within ECD_02412 at 2514.289 kb on + strand, within ECD_02412 at 2514.290 kb on - strand, within ECD_02412 at 2514.290 kb on - strand, within ECD_02412 at 2514.293 kb on + strand, within ECD_02412 at 2514.298 kb on - strand, within ECD_02412 at 2514.411 kb on + strand, within ECD_02412 at 2514.449 kb on - strand, within ECD_02412 at 2514.547 kb on - strand, within ECD_02412 at 2514.569 kb on - strand, within ECD_02412 at 2514.738 kb on + strand, within ECD_02412 at 2514.813 kb on + strand, within ECD_02412 at 2514.814 kb on - strand, within ECD_02412 at 2514.877 kb on + strand, within ECD_02412 at 2514.946 kb on + strand, within ECD_02412 at 2514.947 kb on - strand, within ECD_02412 at 2515.127 kb on + strand, within ECD_02412 at 2515.127 kb on + strand, within ECD_02412 at 2515.152 kb on - strand, within ECD_02412 at 2515.205 kb on - strand, within ECD_02412 at 2515.205 kb on - strand, within ECD_02412 at 2515.205 kb on - strand, within ECD_02412 at 2515.228 kb on - strand, within ECD_02412 at 2515.228 kb on - strand, within ECD_02412 at 2515.228 kb on - strand, within ECD_02412 at 2515.233 kb on + strand, within ECD_02412 at 2515.234 kb on - strand, within ECD_02412 at 2515.234 kb on - strand, within ECD_02412 at 2515.234 kb on - strand, within ECD_02412 at 2515.321 kb on + strand, within ECD_02412 at 2515.423 kb on + strand, within ECD_02412 at 2515.423 kb on + strand, within ECD_02412 at 2515.423 kb on + strand, within ECD_02412 at 2515.424 kb on - strand, within ECD_02412 at 2515.431 kb on + strand, within ECD_02412 at 2515.486 kb on + strand, within ECD_02412 at 2515.713 kb on - strand, within ECD_02412 at 2515.856 kb on - strand, within ECD_02412 at 2515.901 kb on + strand, within ECD_02412 at 2515.966 kb on - strand, within ECD_02412 at 2516.189 kb on - strand, within ECD_02412 at 2516.191 kb on + strand, within ECD_02412 at 2516.191 kb on + strand, within ECD_02412 at 2516.292 kb on - strand at 2516.391 kb on - strand at 2516.405 kb on - strand at 2516.410 kb on + strand at 2516.656 kb on + strand at 2516.735 kb on + strand at 2516.735 kb on + strand at 2516.736 kb on - strand at 2516.808 kb on - strand at 2516.828 kb on + strand at 2516.837 kb on + strand at 2516.837 kb on + strand at 2516.856 kb on + strand at 2516.857 kb on - strand at 2516.857 kb on - strand at 2516.928 kb on - strand at 2516.973 kb on + strand at 2517.098 kb on - strand, within ECD_02413 at 2517.112 kb on - strand, within ECD_02413 at 2517.261 kb on + strand, within ECD_02413 at 2517.261 kb on + strand, within ECD_02413 at 2517.386 kb on + strand, within ECD_02413 at 2517.420 kb on + strand, within ECD_02413 at 2517.452 kb on + strand, within ECD_02413 at 2517.452 kb on + strand, within ECD_02413 at 2517.452 kb on + strand, within ECD_02413 at 2517.545 kb on + strand, within ECD_02413 at 2517.661 kb on + strand, within ECD_02413
Per-strain Table
Position Strand Gene LocusTag Fraction EV116 remove 2,510,983 + ECD_02411 0.64 -1.2 2,510,984 - ECD_02411 0.64 -1.9 2,510,984 - ECD_02411 0.64 -0.4 2,510,984 - ECD_02411 0.64 -1.1 2,510,984 - ECD_02411 0.64 -1.1 2,510,984 - ECD_02411 0.64 -0.9 2,510,984 - ECD_02411 0.64 -0.8 2,511,146 - ECD_02411 0.71 -1.3 2,511,237 + ECD_02411 0.75 -1.7 2,511,268 - ECD_02411 0.77 -0.9 2,511,327 + ECD_02411 0.79 -0.7 2,511,327 + ECD_02411 0.79 -0.6 2,511,470 - ECD_02411 0.85 -2.3 2,511,559 - ECD_02411 0.89 -0.2 2,511,579 + -1.0 2,511,580 - -0.9 2,511,807 + -0.3 2,511,808 - -0.2 2,511,808 - -1.3 2,511,808 - -0.4 2,511,864 + +0.1 2,511,864 + -0.1 2,511,864 + +0.2 2,511,865 - -1.5 2,511,865 - -1.3 2,511,865 - -0.8 2,511,897 + -1.0 2,512,192 + -1.9 2,512,219 + -3.2 2,512,220 - -1.6 2,512,229 - -1.1 2,512,237 + -0.6 2,512,460 - ECD_02412 0.13 -0.1 2,512,548 + ECD_02412 0.15 -0.2 2,512,548 + ECD_02412 0.15 -0.4 2,512,618 + ECD_02412 0.16 -0.8 2,512,619 - ECD_02412 0.16 +0.1 2,512,619 - ECD_02412 0.16 -0.6 2,512,908 - ECD_02412 0.22 +0.9 2,512,912 - ECD_02412 0.22 -0.7 2,513,001 + ECD_02412 0.24 -2.4 2,513,002 - ECD_02412 0.24 +0.8 2,513,170 - ECD_02412 0.27 -0.9 2,513,240 - ECD_02412 0.29 -1.0 2,513,420 - ECD_02412 0.33 -0.2 2,513,524 + ECD_02412 0.35 -1.1 2,513,524 + ECD_02412 0.35 +1.1 2,513,525 - ECD_02412 0.35 -0.0 2,513,525 - ECD_02412 0.35 -1.0 2,513,527 + ECD_02412 0.35 +0.4 2,513,636 - ECD_02412 0.37 -0.6 2,513,636 - ECD_02412 0.37 -0.7 2,513,677 + ECD_02412 0.38 -0.7 2,513,720 + ECD_02412 0.39 -0.9 2,513,870 - ECD_02412 0.42 -1.2 2,513,870 - ECD_02412 0.42 +0.5 2,513,963 - ECD_02412 0.43 -1.0 2,513,974 - ECD_02412 0.44 -0.5 2,514,042 + ECD_02412 0.45 +0.3 2,514,043 - ECD_02412 0.45 +1.0 2,514,050 - ECD_02412 0.45 -0.7 2,514,052 + ECD_02412 0.45 -1.2 2,514,278 + ECD_02412 0.50 -1.9 2,514,278 + ECD_02412 0.50 +2.0 2,514,289 + ECD_02412 0.50 -0.4 2,514,290 - ECD_02412 0.50 -0.1 2,514,290 - ECD_02412 0.50 -1.7 2,514,293 + ECD_02412 0.50 -0.0 2,514,298 - ECD_02412 0.50 +1.1 2,514,411 + ECD_02412 0.52 -2.5 2,514,449 - ECD_02412 0.53 -2.9 2,514,547 - ECD_02412 0.55 -0.5 2,514,569 - ECD_02412 0.56 -0.9 2,514,738 + ECD_02412 0.59 -1.9 2,514,813 + ECD_02412 0.61 +1.0 2,514,814 - ECD_02412 0.61 -1.7 2,514,877 + ECD_02412 0.62 +0.6 2,514,946 + ECD_02412 0.63 -0.9 2,514,947 - ECD_02412 0.63 -2.3 2,515,127 + ECD_02412 0.67 +0.4 2,515,127 + ECD_02412 0.67 -1.4 2,515,152 - ECD_02412 0.67 -2.5 2,515,205 - ECD_02412 0.69 -2.0 2,515,205 - ECD_02412 0.69 -0.8 2,515,205 - ECD_02412 0.69 -0.6 2,515,228 - ECD_02412 0.69 +1.4 2,515,228 - ECD_02412 0.69 -2.0 2,515,228 - ECD_02412 0.69 +0.3 2,515,233 + ECD_02412 0.69 -1.8 2,515,234 - ECD_02412 0.69 -1.4 2,515,234 - ECD_02412 0.69 +0.5 2,515,234 - ECD_02412 0.69 -0.8 2,515,321 + ECD_02412 0.71 +0.5 2,515,423 + ECD_02412 0.73 -0.4 2,515,423 + ECD_02412 0.73 -1.4 2,515,423 + ECD_02412 0.73 -0.1 2,515,424 - ECD_02412 0.73 -0.5 2,515,431 + ECD_02412 0.73 -1.1 2,515,486 + ECD_02412 0.74 -3.4 2,515,713 - ECD_02412 0.79 +0.0 2,515,856 - ECD_02412 0.82 -0.7 2,515,901 + ECD_02412 0.83 -1.1 2,515,966 - ECD_02412 0.84 +0.8 2,516,189 - ECD_02412 0.88 +0.6 2,516,191 + ECD_02412 0.88 -1.5 2,516,191 + ECD_02412 0.88 -2.0 2,516,292 - +0.2 2,516,391 - -1.9 2,516,405 - +0.4 2,516,410 + -1.2 2,516,656 + +0.1 2,516,735 + -0.3 2,516,735 + +0.3 2,516,736 - -0.4 2,516,808 - -0.1 2,516,828 + -0.7 2,516,837 + -1.6 2,516,837 + -1.5 2,516,856 + -0.6 2,516,857 - +1.2 2,516,857 - +0.6 2,516,928 - +0.2 2,516,973 + +1.8 2,517,098 - ECD_02413 0.15 +1.2 2,517,112 - ECD_02413 0.16 +1.3 2,517,261 + ECD_02413 0.34 -0.4 2,517,261 + ECD_02413 0.34 +0.6 2,517,386 + ECD_02413 0.49 +0.1 2,517,420 + ECD_02413 0.53 -1.0 2,517,452 + ECD_02413 0.57 +1.0 2,517,452 + ECD_02413 0.57 +0.0 2,517,452 + ECD_02413 0.57 +0.0 2,517,545 + ECD_02413 0.67 +0.3 2,517,661 + ECD_02413 0.81 -0.5
Or see this region's nucleotide sequence