Experiment: EV116
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02044 and ECD_02045 are separated by 140 nucleotides ECD_02045 and ECD_02046 are separated by 9 nucleotides
ECD_02044: ECD_02044 - methionyl-tRNA synthetase, at 2,089,163 to 2,091,196
_02044
ECD_02045: ECD_02045 - molybdate metabolism regulator, at 2,091,337 to 2,095,131
_02045
ECD_02046: ECD_02046 - DUF4132 domain-containing protein, at 2,095,141 to 2,098,773
_02046
Position (kb)
2091
2092
2093
2094
2095
2096 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2090.803 kb on + strand, within ECD_02044 at 2090.836 kb on + strand, within ECD_02044 at 2091.194 kb on + strand at 2092.166 kb on + strand, within ECD_02045 at 2092.417 kb on + strand, within ECD_02045 at 2092.469 kb on + strand, within ECD_02045 at 2092.580 kb on + strand, within ECD_02045 at 2092.580 kb on + strand, within ECD_02045 at 2092.581 kb on - strand, within ECD_02045 at 2092.708 kb on - strand, within ECD_02045 at 2093.080 kb on + strand, within ECD_02045 at 2093.081 kb on - strand, within ECD_02045 at 2093.081 kb on - strand, within ECD_02045 at 2093.081 kb on - strand, within ECD_02045 at 2093.081 kb on - strand, within ECD_02045 at 2093.082 kb on + strand, within ECD_02045 at 2093.542 kb on - strand, within ECD_02045 at 2093.594 kb on - strand, within ECD_02045 at 2093.649 kb on - strand, within ECD_02045 at 2093.802 kb on - strand, within ECD_02045 at 2093.813 kb on + strand, within ECD_02045 at 2094.007 kb on - strand, within ECD_02045 at 2094.108 kb on - strand, within ECD_02045 at 2094.539 kb on - strand, within ECD_02045 at 2094.557 kb on + strand, within ECD_02045 at 2094.558 kb on - strand, within ECD_02045 at 2094.570 kb on + strand, within ECD_02045 at 2094.593 kb on - strand, within ECD_02045 at 2094.593 kb on - strand, within ECD_02045 at 2095.104 kb on + strand at 2095.563 kb on - strand, within ECD_02046 at 2095.576 kb on + strand, within ECD_02046 at 2095.592 kb on - strand, within ECD_02046 at 2095.895 kb on + strand, within ECD_02046 at 2095.895 kb on + strand, within ECD_02046 at 2095.895 kb on + strand, within ECD_02046 at 2095.896 kb on - strand, within ECD_02046 at 2095.899 kb on + strand, within ECD_02046 at 2095.919 kb on - strand, within ECD_02046 at 2096.122 kb on - strand, within ECD_02046 at 2096.122 kb on - strand, within ECD_02046
Per-strain Table
Position Strand Gene LocusTag Fraction EV116 remove 2,090,803 + ECD_02044 0.81 -1.8 2,090,836 + ECD_02044 0.82 -0.1 2,091,194 + -0.2 2,092,166 + ECD_02045 0.22 +0.1 2,092,417 + ECD_02045 0.28 -1.3 2,092,469 + ECD_02045 0.30 -0.7 2,092,580 + ECD_02045 0.33 +1.9 2,092,580 + ECD_02045 0.33 +1.3 2,092,581 - ECD_02045 0.33 +1.3 2,092,708 - ECD_02045 0.36 -0.8 2,093,080 + ECD_02045 0.46 +0.6 2,093,081 - ECD_02045 0.46 +0.6 2,093,081 - ECD_02045 0.46 +0.2 2,093,081 - ECD_02045 0.46 -1.0 2,093,081 - ECD_02045 0.46 -0.6 2,093,082 + ECD_02045 0.46 -0.4 2,093,542 - ECD_02045 0.58 -0.4 2,093,594 - ECD_02045 0.59 +0.1 2,093,649 - ECD_02045 0.61 -0.0 2,093,802 - ECD_02045 0.65 +0.7 2,093,813 + ECD_02045 0.65 +0.7 2,094,007 - ECD_02045 0.70 -1.2 2,094,108 - ECD_02045 0.73 +1.4 2,094,539 - ECD_02045 0.84 +1.2 2,094,557 + ECD_02045 0.85 -1.9 2,094,558 - ECD_02045 0.85 -2.2 2,094,570 + ECD_02045 0.85 -1.4 2,094,593 - ECD_02045 0.86 +0.4 2,094,593 - ECD_02045 0.86 -0.5 2,095,104 + -0.4 2,095,563 - ECD_02046 0.12 -1.0 2,095,576 + ECD_02046 0.12 -0.6 2,095,592 - ECD_02046 0.12 +0.6 2,095,895 + ECD_02046 0.21 +2.0 2,095,895 + ECD_02046 0.21 -1.4 2,095,895 + ECD_02046 0.21 -0.1 2,095,896 - ECD_02046 0.21 +0.5 2,095,899 + ECD_02046 0.21 -1.7 2,095,919 - ECD_02046 0.21 +0.6 2,096,122 - ECD_02046 0.27 -0.4 2,096,122 - ECD_02046 0.27 -0.0
Or see this region's nucleotide sequence