Experiment: EV116
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02024 and ECD_02025 are separated by 299 nucleotides ECD_02025 and ECD_02026 are separated by 256 nucleotides
ECD_02024: ECD_02024 - D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit, at 2,074,153 to 2,075,007
_02024
ECD_02025: ECD_02025 - fructose-bisphosphate aldolase class I, at 2,075,307 to 2,076,359
_02025
ECD_02026: ECD_02026 - nucleoside transporter, low affinity, at 2,076,616 to 2,077,893
_02026
Position (kb)
2075
2076
2077 Strain fitness (log2 ratio)
-1
0
1
2 at 2074.460 kb on + strand, within ECD_02024 at 2074.461 kb on - strand, within ECD_02024 at 2074.461 kb on - strand, within ECD_02024 at 2074.465 kb on - strand, within ECD_02024 at 2074.846 kb on - strand, within ECD_02024 at 2075.174 kb on + strand at 2075.191 kb on - strand at 2075.196 kb on + strand at 2075.197 kb on - strand at 2075.197 kb on - strand at 2075.249 kb on + strand at 2075.250 kb on - strand at 2075.396 kb on + strand at 2075.520 kb on - strand, within ECD_02025 at 2075.522 kb on - strand, within ECD_02025 at 2075.606 kb on - strand, within ECD_02025 at 2075.667 kb on + strand, within ECD_02025 at 2075.668 kb on - strand, within ECD_02025 at 2075.668 kb on - strand, within ECD_02025 at 2075.668 kb on - strand, within ECD_02025 at 2075.855 kb on - strand, within ECD_02025 at 2075.855 kb on - strand, within ECD_02025 at 2075.927 kb on - strand, within ECD_02025 at 2075.961 kb on - strand, within ECD_02025 at 2076.206 kb on + strand, within ECD_02025 at 2076.206 kb on + strand, within ECD_02025 at 2076.206 kb on + strand, within ECD_02025 at 2076.207 kb on - strand, within ECD_02025 at 2076.211 kb on - strand, within ECD_02025 at 2076.253 kb on - strand, within ECD_02025 at 2076.256 kb on + strand at 2076.299 kb on + strand at 2076.300 kb on - strand at 2076.928 kb on + strand, within ECD_02026 at 2076.928 kb on + strand, within ECD_02026 at 2076.931 kb on - strand, within ECD_02026 at 2077.297 kb on + strand, within ECD_02026 at 2077.301 kb on - strand, within ECD_02026
Per-strain Table
Position Strand Gene LocusTag Fraction EV116 remove 2,074,460 + ECD_02024 0.36 -0.2 2,074,461 - ECD_02024 0.36 +0.8 2,074,461 - ECD_02024 0.36 +0.7 2,074,465 - ECD_02024 0.36 +1.0 2,074,846 - ECD_02024 0.81 -0.7 2,075,174 + -1.3 2,075,191 - +0.2 2,075,196 + +0.8 2,075,197 - +1.2 2,075,197 - +1.1 2,075,249 + -0.3 2,075,250 - +0.3 2,075,396 + -0.6 2,075,520 - ECD_02025 0.20 +0.1 2,075,522 - ECD_02025 0.20 -1.6 2,075,606 - ECD_02025 0.28 +0.8 2,075,667 + ECD_02025 0.34 -0.9 2,075,668 - ECD_02025 0.34 -0.5 2,075,668 - ECD_02025 0.34 +1.8 2,075,668 - ECD_02025 0.34 +1.6 2,075,855 - ECD_02025 0.52 +0.2 2,075,855 - ECD_02025 0.52 +0.1 2,075,927 - ECD_02025 0.59 +0.5 2,075,961 - ECD_02025 0.62 +0.9 2,076,206 + ECD_02025 0.85 -0.4 2,076,206 + ECD_02025 0.85 +2.3 2,076,206 + ECD_02025 0.85 +0.0 2,076,207 - ECD_02025 0.85 +0.2 2,076,211 - ECD_02025 0.86 +0.4 2,076,253 - ECD_02025 0.90 +0.0 2,076,256 + -0.7 2,076,299 + +1.2 2,076,300 - -0.3 2,076,928 + ECD_02026 0.24 +1.0 2,076,928 + ECD_02026 0.24 +1.0 2,076,931 - ECD_02026 0.25 -1.3 2,077,297 + ECD_02026 0.53 +0.1 2,077,301 - ECD_02026 0.54 -0.4
Or see this region's nucleotide sequence