Strain Fitness in Escherichia coli BL21 around ECD_02025

Experiment: EV116

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02024 and ECD_02025 are separated by 299 nucleotidesECD_02025 and ECD_02026 are separated by 256 nucleotides ECD_02024: ECD_02024 - D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit, at 2,074,153 to 2,075,007 _02024 ECD_02025: ECD_02025 - fructose-bisphosphate aldolase class I, at 2,075,307 to 2,076,359 _02025 ECD_02026: ECD_02026 - nucleoside transporter, low affinity, at 2,076,616 to 2,077,893 _02026 Position (kb) 2075 2076 2077Strain fitness (log2 ratio) -1 0 1 2at 2074.460 kb on + strand, within ECD_02024at 2074.461 kb on - strand, within ECD_02024at 2074.461 kb on - strand, within ECD_02024at 2074.465 kb on - strand, within ECD_02024at 2074.846 kb on - strand, within ECD_02024at 2075.174 kb on + strandat 2075.191 kb on - strandat 2075.196 kb on + strandat 2075.197 kb on - strandat 2075.197 kb on - strandat 2075.249 kb on + strandat 2075.250 kb on - strandat 2075.396 kb on + strandat 2075.520 kb on - strand, within ECD_02025at 2075.522 kb on - strand, within ECD_02025at 2075.606 kb on - strand, within ECD_02025at 2075.667 kb on + strand, within ECD_02025at 2075.668 kb on - strand, within ECD_02025at 2075.668 kb on - strand, within ECD_02025at 2075.668 kb on - strand, within ECD_02025at 2075.855 kb on - strand, within ECD_02025at 2075.855 kb on - strand, within ECD_02025at 2075.927 kb on - strand, within ECD_02025at 2075.961 kb on - strand, within ECD_02025at 2076.206 kb on + strand, within ECD_02025at 2076.206 kb on + strand, within ECD_02025at 2076.206 kb on + strand, within ECD_02025at 2076.207 kb on - strand, within ECD_02025at 2076.211 kb on - strand, within ECD_02025at 2076.253 kb on - strand, within ECD_02025at 2076.256 kb on + strandat 2076.299 kb on + strandat 2076.300 kb on - strandat 2076.928 kb on + strand, within ECD_02026at 2076.928 kb on + strand, within ECD_02026at 2076.931 kb on - strand, within ECD_02026at 2077.297 kb on + strand, within ECD_02026at 2077.301 kb on - strand, within ECD_02026

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Per-strain Table

Position Strand Gene LocusTag Fraction EV116
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2,074,460 + ECD_02024 0.36 -0.2
2,074,461 - ECD_02024 0.36 +0.8
2,074,461 - ECD_02024 0.36 +0.7
2,074,465 - ECD_02024 0.36 +1.0
2,074,846 - ECD_02024 0.81 -0.7
2,075,174 + -1.3
2,075,191 - +0.2
2,075,196 + +0.8
2,075,197 - +1.2
2,075,197 - +1.1
2,075,249 + -0.3
2,075,250 - +0.3
2,075,396 + -0.6
2,075,520 - ECD_02025 0.20 +0.1
2,075,522 - ECD_02025 0.20 -1.6
2,075,606 - ECD_02025 0.28 +0.8
2,075,667 + ECD_02025 0.34 -0.9
2,075,668 - ECD_02025 0.34 -0.5
2,075,668 - ECD_02025 0.34 +1.8
2,075,668 - ECD_02025 0.34 +1.6
2,075,855 - ECD_02025 0.52 +0.2
2,075,855 - ECD_02025 0.52 +0.1
2,075,927 - ECD_02025 0.59 +0.5
2,075,961 - ECD_02025 0.62 +0.9
2,076,206 + ECD_02025 0.85 -0.4
2,076,206 + ECD_02025 0.85 +2.3
2,076,206 + ECD_02025 0.85 +0.0
2,076,207 - ECD_02025 0.85 +0.2
2,076,211 - ECD_02025 0.86 +0.4
2,076,253 - ECD_02025 0.90 +0.0
2,076,256 + -0.7
2,076,299 + +1.2
2,076,300 - -0.3
2,076,928 + ECD_02026 0.24 +1.0
2,076,928 + ECD_02026 0.24 +1.0
2,076,931 - ECD_02026 0.25 -1.3
2,077,297 + ECD_02026 0.53 +0.1
2,077,301 - ECD_02026 0.54 -0.4

Or see this region's nucleotide sequence