Experiment: EV116
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00410 and ECD_00411 are separated by 171 nucleotides ECD_00411 and ECD_00412 are separated by 25 nucleotides ECD_00412 and ECD_00413 are separated by 545 nucleotides
ECD_00410: ECD_00410 - maltose O-acetyltransferase, at 448,413 to 448,964
_00410
ECD_00411: ECD_00411 - modulator of gene expression, with H-NS, at 449,136 to 449,354
_00411
ECD_00412: ECD_00412 - Hha toxicity attenuator; conjugation-related protein, at 449,380 to 449,754
_00412
ECD_00413: ECD_00413 - multidrug efflux system protein, at 450,300 to 453,449
_00413
Position (kb) 449
450 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 448.428 kb on + strand at 448.429 kb on - strand at 448.497 kb on + strand, within ECD_00410 at 448.562 kb on + strand, within ECD_00410 at 448.562 kb on + strand, within ECD_00410 at 448.562 kb on + strand, within ECD_00410 at 448.602 kb on - strand, within ECD_00410 at 448.604 kb on + strand, within ECD_00410 at 448.611 kb on + strand, within ECD_00410 at 448.643 kb on + strand, within ECD_00410 at 448.664 kb on + strand, within ECD_00410 at 448.665 kb on - strand, within ECD_00410 at 448.665 kb on - strand, within ECD_00410 at 448.665 kb on - strand, within ECD_00410 at 448.751 kb on - strand, within ECD_00410 at 448.783 kb on + strand, within ECD_00410 at 448.806 kb on + strand, within ECD_00410 at 448.830 kb on + strand, within ECD_00410 at 448.871 kb on + strand, within ECD_00410 at 448.965 kb on + strand at 449.036 kb on - strand at 449.036 kb on - strand at 449.036 kb on - strand at 449.365 kb on - strand at 449.376 kb on - strand at 449.476 kb on - strand, within ECD_00412 at 449.476 kb on - strand, within ECD_00412 at 449.690 kb on + strand, within ECD_00412 at 449.713 kb on - strand, within ECD_00412 at 449.813 kb on - strand at 449.847 kb on - strand at 450.022 kb on + strand at 450.282 kb on + strand at 450.298 kb on + strand at 450.318 kb on - strand at 450.318 kb on - strand at 450.403 kb on - strand at 450.438 kb on - strand at 450.442 kb on - strand at 450.442 kb on - strand at 450.535 kb on - strand at 450.579 kb on - strand at 450.674 kb on - strand, within ECD_00413
Per-strain Table
Position Strand Gene LocusTag Fraction EV116 remove 448,428 + +1.0 448,429 - -1.3 448,497 + ECD_00410 0.15 -3.0 448,562 + ECD_00410 0.27 +0.3 448,562 + ECD_00410 0.27 -1.6 448,562 + ECD_00410 0.27 -1.0 448,602 - ECD_00410 0.34 +1.0 448,604 + ECD_00410 0.35 +1.6 448,611 + ECD_00410 0.36 +0.4 448,643 + ECD_00410 0.42 +2.1 448,664 + ECD_00410 0.45 -2.2 448,665 - ECD_00410 0.46 -0.6 448,665 - ECD_00410 0.46 +0.0 448,665 - ECD_00410 0.46 +1.1 448,751 - ECD_00410 0.61 -0.0 448,783 + ECD_00410 0.67 -2.0 448,806 + ECD_00410 0.71 -0.0 448,830 + ECD_00410 0.76 +0.1 448,871 + ECD_00410 0.83 +0.3 448,965 + +0.0 449,036 - +0.4 449,036 - +0.7 449,036 - -0.7 449,365 - +2.0 449,376 - +0.9 449,476 - ECD_00412 0.26 -1.3 449,476 - ECD_00412 0.26 -1.4 449,690 + ECD_00412 0.83 -0.8 449,713 - ECD_00412 0.89 -2.2 449,813 - +1.0 449,847 - -2.1 450,022 + -2.5 450,282 + -2.2 450,298 + +0.5 450,318 - -2.0 450,318 - -1.2 450,403 - -1.8 450,438 - -0.6 450,442 - -0.3 450,442 - -1.3 450,535 - -2.0 450,579 - +0.9 450,674 - ECD_00413 0.12 -3.9
Or see this region's nucleotide sequence