Strain Fitness in Escherichia coli BL21 around ECD_02145

Experiment: Bas18

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02143 and ECD_02144 overlap by 82 nucleotidesECD_02144 and ECD_02145 are separated by 274 nucleotidesECD_02145 and ECD_02146 are separated by 166 nucleotides ECD_02143: ECD_02143 - IS1 protein InsB, at 2,206,416 to 2,206,919 _02143 ECD_02144: ECD_02144 - IS1 protein InsA, at 2,206,838 to 2,207,113 _02144 ECD_02145: ECD_02145 - hybrid sensory kinase in two-component regulatory system with RcsB and YojN, at 2,207,388 to 2,210,237 _02145 ECD_02146: ECD_02146 - sensory histidine kinase in two-component regulatory system with AtoC, at 2,210,404 to 2,212,230 _02146 Position (kb) 2207 2208 2209 2210 2211Strain fitness (log2 ratio) -1 0 1at 2207.180 kb on - strandat 2207.187 kb on - strandat 2207.224 kb on - strandat 2207.319 kb on + strandat 2207.423 kb on - strandat 2207.425 kb on - strandat 2207.425 kb on - strandat 2207.597 kb on + strandat 2207.598 kb on - strandat 2207.598 kb on - strandat 2207.598 kb on - strandat 2207.598 kb on - strandat 2207.598 kb on - strandat 2207.645 kb on + strandat 2207.646 kb on - strandat 2207.650 kb on - strandat 2207.774 kb on + strand, within ECD_02145at 2207.893 kb on - strand, within ECD_02145at 2207.983 kb on - strand, within ECD_02145at 2207.994 kb on - strand, within ECD_02145at 2208.031 kb on + strand, within ECD_02145at 2208.031 kb on + strand, within ECD_02145at 2208.032 kb on - strand, within ECD_02145at 2208.225 kb on - strand, within ECD_02145at 2208.445 kb on - strand, within ECD_02145at 2208.536 kb on - strand, within ECD_02145at 2208.544 kb on - strand, within ECD_02145at 2208.544 kb on - strand, within ECD_02145at 2208.568 kb on - strand, within ECD_02145at 2208.572 kb on - strand, within ECD_02145at 2208.666 kb on - strand, within ECD_02145at 2209.023 kb on - strand, within ECD_02145at 2209.056 kb on - strand, within ECD_02145at 2209.056 kb on - strand, within ECD_02145at 2209.070 kb on - strand, within ECD_02145at 2209.074 kb on - strand, within ECD_02145at 2209.074 kb on - strand, within ECD_02145at 2209.228 kb on + strand, within ECD_02145at 2209.401 kb on - strand, within ECD_02145at 2209.701 kb on - strand, within ECD_02145at 2210.014 kb on + strandat 2210.192 kb on - strandat 2210.192 kb on - strandat 2210.378 kb on - strandat 2210.411 kb on - strandat 2210.490 kb on + strandat 2210.493 kb on + strandat 2210.507 kb on + strandat 2210.713 kb on + strand, within ECD_02146at 2210.759 kb on + strand, within ECD_02146at 2210.826 kb on + strand, within ECD_02146at 2211.154 kb on - strand, within ECD_02146at 2211.192 kb on + strand, within ECD_02146

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas18
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2,207,180 - +0.3
2,207,187 - +0.8
2,207,224 - -1.6
2,207,319 + +0.3
2,207,423 - -0.3
2,207,425 - -0.6
2,207,425 - -0.5
2,207,597 + +0.5
2,207,598 - +0.9
2,207,598 - -0.5
2,207,598 - +1.5
2,207,598 - -0.6
2,207,598 - +0.5
2,207,645 + -0.1
2,207,646 - +1.4
2,207,650 - -0.0
2,207,774 + ECD_02145 0.14 +0.2
2,207,893 - ECD_02145 0.18 -1.1
2,207,983 - ECD_02145 0.21 -0.7
2,207,994 - ECD_02145 0.21 -0.3
2,208,031 + ECD_02145 0.23 +1.3
2,208,031 + ECD_02145 0.23 -0.5
2,208,032 - ECD_02145 0.23 +0.3
2,208,225 - ECD_02145 0.29 +0.4
2,208,445 - ECD_02145 0.37 +0.7
2,208,536 - ECD_02145 0.40 +0.4
2,208,544 - ECD_02145 0.41 +0.7
2,208,544 - ECD_02145 0.41 -0.7
2,208,568 - ECD_02145 0.41 -0.2
2,208,572 - ECD_02145 0.42 -0.1
2,208,666 - ECD_02145 0.45 +1.0
2,209,023 - ECD_02145 0.57 +0.2
2,209,056 - ECD_02145 0.59 +0.6
2,209,056 - ECD_02145 0.59 +0.2
2,209,070 - ECD_02145 0.59 -0.7
2,209,074 - ECD_02145 0.59 +0.0
2,209,074 - ECD_02145 0.59 +0.2
2,209,228 + ECD_02145 0.65 -0.3
2,209,401 - ECD_02145 0.71 -0.1
2,209,701 - ECD_02145 0.81 +0.5
2,210,014 + +0.9
2,210,192 - +0.4
2,210,192 - -0.1
2,210,378 - -0.5
2,210,411 - -0.1
2,210,490 + +0.3
2,210,493 + -0.1
2,210,507 + -0.6
2,210,713 + ECD_02146 0.17 -0.4
2,210,759 + ECD_02146 0.19 +0.8
2,210,826 + ECD_02146 0.23 +0.2
2,211,154 - ECD_02146 0.41 +0.7
2,211,192 + ECD_02146 0.43 +0.4

Or see this region's nucleotide sequence