Experiment: Bas18
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00253 and ECD_00254 are separated by 774 nucleotides ECD_00254 and ECD_00255 are separated by 174 nucleotides
ECD_00253: ECD_00253 - putative transcriptional regulator for the ecp operon, at 280,930 to 281,520
_00253
ECD_00254: ECD_00254 - uncharacterized protein, at 282,295 to 282,522
_00254
ECD_00255: ECD_00255 - 50S ribosomal protein L31 type B; alternative zinc-limitation L31 protein, at 282,697 to 282,960
_00255
Position (kb) 282
283 Strain fitness (log2 ratio) -1
0
1 at 281.860 kb on - strand at 282.046 kb on + strand at 282.046 kb on + strand at 282.092 kb on + strand at 282.172 kb on + strand at 282.241 kb on + strand at 282.246 kb on + strand at 282.364 kb on + strand, within ECD_00254 at 282.364 kb on + strand, within ECD_00254 at 282.397 kb on - strand, within ECD_00254 at 282.397 kb on - strand, within ECD_00254 at 282.401 kb on + strand, within ECD_00254 at 282.401 kb on + strand, within ECD_00254 at 282.457 kb on + strand, within ECD_00254 at 282.457 kb on + strand, within ECD_00254 at 282.590 kb on - strand at 282.619 kb on - strand at 282.619 kb on - strand at 282.619 kb on - strand at 282.620 kb on + strand at 282.789 kb on + strand, within ECD_00255 at 282.791 kb on + strand, within ECD_00255 at 282.830 kb on + strand, within ECD_00255 at 282.831 kb on - strand, within ECD_00255 at 282.896 kb on + strand, within ECD_00255 at 283.110 kb on - strand at 283.462 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas18 remove 281,860 - +0.7 282,046 + -0.2 282,046 + +0.8 282,092 + -0.1 282,172 + +0.9 282,241 + -0.1 282,246 + +0.0 282,364 + ECD_00254 0.30 -1.7 282,364 + ECD_00254 0.30 -0.6 282,397 - ECD_00254 0.45 +0.1 282,397 - ECD_00254 0.45 +1.4 282,401 + ECD_00254 0.46 -0.7 282,401 + ECD_00254 0.46 -0.5 282,457 + ECD_00254 0.71 -0.2 282,457 + ECD_00254 0.71 -1.0 282,590 - -0.1 282,619 - +0.1 282,619 - +0.5 282,619 - -0.0 282,620 + +0.1 282,789 + ECD_00255 0.35 -0.5 282,791 + ECD_00255 0.36 +0.1 282,830 + ECD_00255 0.50 +0.2 282,831 - ECD_00255 0.51 -0.4 282,896 + ECD_00255 0.75 -1.2 283,110 - +0.6 283,462 - -0.3
Or see this region's nucleotide sequence