Strain Fitness in Escherichia coli BW25113 around b3488

Experiment: LB Anaerobic with Ticarcillin 0.00003125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB Anaerobic with Ticarcillin 0.00003125 mM
3,628,055	-	yhiI	b3487	0.47	-0.9
3,628,063	+	yhiI	b3487	0.47	-1.6
3,628,066	-	yhiI	b3487	0.48	-0.9
3,628,199	+	yhiI	b3487	0.60	-0.4
3,628,223	+	yhiI	b3487	0.62	+0.5
3,628,223	+	yhiI	b3487	0.62	-0.1
3,628,236	+	yhiI	b3487	0.63	-0.3
3,628,244	-	yhiI	b3487	0.64	-0.5
3,628,269	-	yhiI	b3487	0.67	-0.0
3,628,303	+	yhiI	b3487	0.70	-1.0
3,628,307	-	yhiI	b3487	0.70	-1.3
3,628,307	-	yhiI	b3487	0.70	-0.3
3,628,347	-	yhiI	b3487	0.74	-0.0
3,628,365	-	yhiI	b3487	0.76	+0.4
3,628,426	-	yhiI	b3487	0.81	+1.1
3,628,426	-	yhiI	b3487	0.81	-0.4
3,628,506	+	yhiI	b3487	0.89	+0.1
3,628,617	+				-0.8
3,628,623	-				-0.9
3,628,671	-				-0.6
3,628,716	-				+0.5
3,628,745	-				+0.9
3,628,745	-				-0.3
3,628,749	-				-0.4
3,628,753	+				-0.5
3,628,753	+				+0.3
3,628,758	+				-0.1
3,628,769	-				+0.2
3,628,769	-				-0.6
3,628,776	-				-0.3
3,628,789	+				-0.5
3,628,792	-				+1.1
3,628,828	-				+0.3
3,628,843	-				+0.1
3,628,848	+				+0.3
3,628,882	+				-0.3
3,628,916	-				-1.5
3,628,952	+				-0.9
3,628,956	-				-0.5
3,628,997	-				+0.1
3,629,004	-				-0.7
3,629,068	+				-0.4
3,629,073	+				+0.2
3,629,075	+				+0.2
3,629,083	-				+0.3
3,629,086	+				+0.1
3,629,087	-				-1.7
3,629,089	-				+0.1
3,629,095	-				+0.3
3,629,095	-				-0.7
3,629,097	-				+1.3
3,629,130	+				-1.3
3,629,153	-				-0.3
3,629,162	+	yhiJ	b3488	0.11	-0.2
3,629,162	+	yhiJ	b3488	0.11	+0.1
3,629,162	+	yhiJ	b3488	0.11	+1.1
3,629,162	+	yhiJ	b3488	0.11	-0.3
3,629,162	+	yhiJ	b3488	0.11	+1.1
3,629,180	-	yhiJ	b3488	0.12	+1.3
3,629,184	+	yhiJ	b3488	0.12	-0.2
3,629,189	+	yhiJ	b3488	0.12	+0.5
3,629,191	+	yhiJ	b3488	0.12	+0.9
3,629,194	+	yhiJ	b3488	0.13	-0.6
3,629,194	+	yhiJ	b3488	0.13	-0.3
3,629,213	+	yhiJ	b3488	0.14	-0.3
3,629,213	-	yhiJ	b3488	0.14	+0.3
3,629,215	+	yhiJ	b3488	0.14	-0.1
3,629,215	+	yhiJ	b3488	0.14	-2.4
3,629,227	+	yhiJ	b3488	0.15	-0.5
3,629,227	+	yhiJ	b3488	0.15	-0.8
3,629,242	+	yhiJ	b3488	0.15	-1.1
3,629,242	+	yhiJ	b3488	0.15	-0.4
3,629,242	+	yhiJ	b3488	0.15	-0.9
3,629,252	+	yhiJ	b3488	0.16	-0.3
3,629,252	+	yhiJ	b3488	0.16	+0.1
3,629,252	+	yhiJ	b3488	0.16	-0.2
3,629,252	+	yhiJ	b3488	0.16	-1.0
3,629,252	+	yhiJ	b3488	0.16	-0.6
3,629,252	+	yhiJ	b3488	0.16	-1.7
3,629,252	+	yhiJ	b3488	0.16	-1.0
3,629,260	-	yhiJ	b3488	0.17	+1.3
3,629,269	+	yhiJ	b3488	0.17	-0.1
3,629,269	+	yhiJ	b3488	0.17	-1.1
3,629,275	+	yhiJ	b3488	0.17	-0.3
3,629,326	-	yhiJ	b3488	0.21	+1.3
3,629,359	+	yhiJ	b3488	0.23	-1.9
3,629,404	+	yhiJ	b3488	0.25	+0.1
3,629,404	+	yhiJ	b3488	0.25	-0.2
3,629,425	+	yhiJ	b3488	0.27	+2.1
3,629,430	+	yhiJ	b3488	0.27	-1.0
3,629,446	+	yhiJ	b3488	0.28	+1.3
3,629,446	+	yhiJ	b3488	0.28	+1.3
3,629,454	-	yhiJ	b3488	0.29	+1.3
3,629,561	-	yhiJ	b3488	0.35	+1.3
3,629,574	+	yhiJ	b3488	0.36	+1.3
3,629,591	+	yhiJ	b3488	0.37	+1.3
3,629,599	+	yhiJ	b3488	0.37	+1.3
3,630,560	-				+1.3
3,630,580	+				+1.3
3,630,583	+				+1.3
3,630,583	+				+1.3
3,630,880	-				+1.3
3,630,880	-				+1.3
3,630,966	-				+1.3
3,630,966	-				+0.3
3,630,990	-				+1.3
3,631,001	-				+1.3
3,631,001	-				+1.3
3,631,066	-	yhiL	b4660	0.12	+1.3
3,631,068	-	yhiL	b4660	0.12	+1.3
3,631,068	-	yhiL	b4660	0.12	+1.3
3,631,134	-	yhiL	b4660	0.16	+1.3