Strain Fitness in Escherichia coli BW25113 around b2368
Experiment: LB Anaerobic with Cephalothin 0.0000078125 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB Anaerobic with Cephalothin 0.0000078125 mM |
---|---|---|---|---|---|
remove | |||||
2,479,253 | - | emrY | b2367 | 0.39 | +1.0 |
2,479,275 | - | emrY | b2367 | 0.40 | +1.0 |
2,479,275 | - | emrY | b2367 | 0.40 | +0.4 |
2,479,504 | - | emrY | b2367 | 0.55 | +1.0 |
2,479,885 | - | emrY | b2367 | 0.80 | +1.0 |
2,479,902 | - | emrY | b2367 | 0.81 | -0.6 |
2,480,011 | - | emrY | b2367 | 0.88 | +1.0 |
2,480,011 | - | emrY | b2367 | 0.88 | +1.0 |
2,480,016 | - | emrY | b2367 | 0.88 | +1.0 |
2,480,016 | - | emrY | b2367 | 0.88 | -0.0 |
2,480,020 | + | emrY | b2367 | 0.88 | +1.0 |
2,480,026 | + | emrY | b2367 | 0.89 | +1.0 |
2,480,026 | + | emrY | b2367 | 0.89 | +1.0 |
2,480,026 | - | emrY | b2367 | 0.89 | +1.0 |
2,480,027 | + | emrY | b2367 | 0.89 | +1.0 |
2,480,034 | - | emrY | b2367 | 0.89 | +1.0 |
2,480,034 | - | emrY | b2367 | 0.89 | +1.0 |
2,480,035 | - | emrY | b2367 | 0.89 | +1.0 |
2,480,035 | - | emrY | b2367 | 0.89 | +1.0 |
2,480,130 | - | +1.0 | |||
2,480,136 | - | +1.0 | |||
2,480,156 | - | +0.0 | |||
2,480,158 | - | +1.5 | |||
2,480,163 | + | +1.0 | |||
2,480,171 | - | +1.0 | |||
2,480,260 | - | -1.5 | |||
2,480,260 | - | +0.0 | |||
2,480,260 | - | +1.0 | |||
2,480,269 | - | -1.3 | |||
2,480,269 | - | -1.0 | |||
2,480,270 | - | +1.4 | |||
2,480,279 | - | +0.7 | |||
2,480,290 | - | +1.0 | |||
2,480,295 | - | +0.3 | |||
2,480,300 | - | -1.0 | |||
2,480,301 | - | +0.6 | |||
2,480,301 | - | +2.0 | |||
2,480,324 | - | emrK | b2368 | 0.11 | +0.0 |
2,480,324 | - | emrK | b2368 | 0.11 | +2.6 |
2,480,352 | - | emrK | b2368 | 0.13 | +0.0 |
2,480,352 | - | emrK | b2368 | 0.13 | -1.3 |
2,480,358 | - | emrK | b2368 | 0.14 | +2.4 |
2,480,362 | + | emrK | b2368 | 0.14 | +1.0 |
2,480,366 | - | emrK | b2368 | 0.14 | -2.2 |
2,480,376 | + | emrK | b2368 | 0.15 | +0.0 |
2,480,376 | - | emrK | b2368 | 0.15 | +0.0 |
2,480,378 | - | emrK | b2368 | 0.15 | +0.0 |
2,480,381 | + | emrK | b2368 | 0.16 | +1.1 |
2,480,398 | + | emrK | b2368 | 0.17 | +3.1 |
2,480,424 | + | emrK | b2368 | 0.19 | -1.0 |
2,480,432 | - | emrK | b2368 | 0.20 | -0.6 |
2,480,432 | - | emrK | b2368 | 0.20 | -1.0 |
2,480,437 | - | emrK | b2368 | 0.21 | +1.0 |
2,480,442 | - | emrK | b2368 | 0.21 | +0.0 |
2,480,450 | + | emrK | b2368 | 0.22 | -1.6 |
2,480,473 | + | emrK | b2368 | 0.24 | -2.2 |
2,480,478 | + | emrK | b2368 | 0.24 | +1.0 |
2,480,486 | + | emrK | b2368 | 0.25 | -1.3 |
2,480,497 | + | emrK | b2368 | 0.26 | +1.0 |
2,480,505 | - | emrK | b2368 | 0.26 | +0.0 |
2,480,511 | + | emrK | b2368 | 0.27 | -0.6 |
2,480,512 | + | emrK | b2368 | 0.27 | -0.6 |
2,480,522 | + | emrK | b2368 | 0.28 | +1.0 |
2,480,569 | + | emrK | b2368 | 0.32 | -0.6 |
2,480,569 | + | emrK | b2368 | 0.32 | -0.6 |
2,480,579 | + | emrK | b2368 | 0.33 | -0.6 |
2,480,589 | + | emrK | b2368 | 0.34 | +1.3 |
2,480,589 | + | emrK | b2368 | 0.34 | -0.6 |
2,480,590 | - | emrK | b2368 | 0.34 | -0.6 |
2,480,647 | - | emrK | b2368 | 0.39 | +1.0 |
2,480,647 | - | emrK | b2368 | 0.39 | +1.0 |
2,480,650 | + | emrK | b2368 | 0.39 | -0.6 |
2,480,652 | + | emrK | b2368 | 0.39 | +0.0 |
2,480,652 | + | emrK | b2368 | 0.39 | +1.0 |
2,480,662 | + | emrK | b2368 | 0.40 | -1.8 |
2,480,674 | - | emrK | b2368 | 0.41 | +1.0 |
2,480,684 | + | emrK | b2368 | 0.42 | +0.3 |
2,480,686 | + | emrK | b2368 | 0.42 | -1.1 |
2,480,689 | + | emrK | b2368 | 0.42 | -2.3 |
2,480,689 | + | emrK | b2368 | 0.42 | +1.0 |
2,480,694 | + | emrK | b2368 | 0.43 | +1.0 |
2,480,694 | + | emrK | b2368 | 0.43 | +0.0 |
2,480,696 | + | emrK | b2368 | 0.43 | +0.3 |
2,480,697 | + | emrK | b2368 | 0.43 | -0.8 |
2,480,697 | + | emrK | b2368 | 0.43 | +0.9 |
2,480,706 | + | emrK | b2368 | 0.44 | -0.1 |
2,480,706 | + | emrK | b2368 | 0.44 | +2.0 |
2,480,709 | - | emrK | b2368 | 0.44 | +1.0 |
2,480,709 | - | emrK | b2368 | 0.44 | +1.0 |
2,480,709 | - | emrK | b2368 | 0.44 | +1.0 |
2,480,726 | + | emrK | b2368 | 0.45 | -0.6 |
2,480,741 | + | emrK | b2368 | 0.47 | +0.6 |
2,480,769 | + | -0.6 | |||
2,480,769 | + | emrK | b2368 | 0.49 | +0.0 |
2,480,782 | - | emrK | b2368 | 0.50 | +1.0 |
2,480,787 | + | emrK | b2368 | 0.51 | +1.2 |
2,480,801 | + | emrK | b2368 | 0.52 | -0.7 |
2,480,801 | + | emrK | b2368 | 0.52 | -0.2 |
2,480,843 | + | emrK | b2368 | 0.55 | -1.0 |
2,480,843 | + | emrK | b2368 | 0.55 | +1.1 |
2,480,843 | + | emrK | b2368 | 0.55 | +0.4 |
2,480,843 | + | emrK | b2368 | 0.55 | -0.8 |
2,480,889 | + | emrK | b2368 | 0.59 | +1.0 |
2,480,897 | - | emrK | b2368 | 0.60 | +1.0 |
2,480,990 | - | emrK | b2368 | 0.68 | +1.0 |
2,481,080 | - | emrK | b2368 | 0.76 | +1.0 |
2,481,221 | - | emrK | b2368 | 0.88 | +1.0 |
2,481,434 | - | -0.3 | |||
2,481,444 | - | +1.5 | |||
2,481,444 | - | +0.0 | |||
2,481,450 | - | +1.0 | |||
2,481,450 | - | -1.0 | |||
2,481,463 | - | +1.6 | |||
2,481,472 | - | +0.6 | |||
2,481,485 | - | +2.4 | |||
2,481,485 | - | -2.6 | |||
2,481,515 | - | +1.0 | |||
2,481,515 | - | +0.0 | |||
2,481,515 | - | -1.0 | |||
2,481,517 | - | -0.6 | |||
2,481,521 | - | +1.0 | |||
2,481,521 | - | +1.0 | |||
2,481,647 | + | +0.6 | |||
2,481,647 | + | +1.8 | |||
2,481,650 | + | +0.9 | |||
2,481,650 | + | +0.7 | |||
2,481,666 | + | +0.7 | |||
2,481,718 | + | +1.0 | |||
2,481,718 | + | +0.0 | |||
2,481,725 | + | +1.0 | |||
2,481,726 | + | +1.0 | |||
2,481,728 | + | +1.0 | |||
2,481,734 | + | +1.0 | |||
2,481,734 | + | +1.0 | |||
2,481,742 | - | +1.0 | |||
2,481,869 | + | evgA | b2369 | 0.15 | +0.0 |
2,481,886 | + | evgA | b2369 | 0.18 | +1.0 |
2,481,888 | + | evgA | b2369 | 0.18 | +1.0 |
2,481,896 | + | evgA | b2369 | 0.19 | +1.0 |
2,481,896 | + | evgA | b2369 | 0.19 | +1.0 |
2,481,905 | + | evgA | b2369 | 0.21 | -1.0 |
2,481,942 | + | evgA | b2369 | 0.27 | -1.6 |
2,481,946 | + | evgA | b2369 | 0.27 | -0.8 |
2,481,946 | + | evgA | b2369 | 0.27 | -1.0 |
2,481,946 | + | evgA | b2369 | 0.27 | -1.3 |
2,481,955 | + | evgA | b2369 | 0.29 | +1.0 |
2,481,955 | + | evgA | b2369 | 0.29 | +0.0 |
2,481,957 | + | evgA | b2369 | 0.29 | +1.0 |
2,481,973 | + | evgA | b2369 | 0.32 | -0.9 |
2,481,984 | + | evgA | b2369 | 0.34 | -1.0 |
2,481,984 | + | evgA | b2369 | 0.34 | +1.0 |
2,482,043 | + | evgA | b2369 | 0.43 | +0.0 |
2,482,043 | + | evgA | b2369 | 0.43 | +1.0 |
2,482,044 | + | evgA | b2369 | 0.43 | +3.6 |
2,482,045 | + | evgA | b2369 | 0.44 | -0.6 |
2,482,136 | + | evgA | b2369 | 0.58 | +1.0 |
2,482,138 | + | evgA | b2369 | 0.59 | +1.0 |
2,482,149 | + | evgA | b2369 | 0.60 | +1.0 |
2,482,156 | - | evgA | b2369 | 0.62 | +1.0 |
2,482,227 | + | evgA | b2369 | 0.73 | -0.6 |
2,482,235 | + | evgA | b2369 | 0.74 | +1.0 |
2,482,235 | + | evgA | b2369 | 0.74 | +1.0 |
2,482,235 | + | evgA | b2369 | 0.74 | +1.0 |
2,482,308 | + | evgA | b2369 | 0.86 | +1.0 |
2,482,355 | + | +0.0 |
Or see this region's nucleotide sequence