Strain Fitness in Escherichia coli BW25113 around b0997

Experiment: LB Anaerobic with Trimethoprim 0.0000003125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB Anaerobic with Trimethoprim 0.0000003125 mM
1,057,487	+	torC	b0996	0.15	+0.5
1,057,487	+	torC	b0996	0.15	-0.1
1,057,562	+	torC	b0996	0.22	+0.5
1,057,562	+	torC	b0996	0.22	-1.1
1,057,765	+	torC	b0996	0.39	-0.5
1,057,980	+	torC	b0996	0.57	-0.2
1,057,988	-	torC	b0996	0.58	+0.3
1,057,988	-	torC	b0996	0.58	-1.4
1,058,141	-	torC	b0996	0.71	+0.2
1,058,187	-	torC	b0996	0.75	+0.3
1,058,259	+	torC	b0996	0.81	+0.2
1,058,294	+	torC	b0996	0.84	+0.0
1,058,453	-				-0.2
1,058,453	-				+0.4
1,058,656	+				+0.3
1,058,889	+	torA	b0997	0.16	+0.5
1,058,907	-	torA	b0997	0.17	-1.1
1,058,976	+	torA	b0997	0.20	-0.3
1,058,976	+	torA	b0997	0.20	-0.2
1,058,984	-	torA	b0997	0.20	+0.1
1,059,020	+	torA	b0997	0.21	+0.5
1,059,020	+	torA	b0997	0.21	+0.7
1,059,048	+	torA	b0997	0.22	+0.7
1,059,048	+	torA	b0997	0.22	-0.9
1,059,109	-	torA	b0997	0.25	-0.1
1,059,314	-	torA	b0997	0.33	-0.3
1,059,336	-	torA	b0997	0.34	-0.7
1,059,336	-	torA	b0997	0.34	+0.1
1,059,388	+	torA	b0997	0.36	-0.3
1,059,601	+	torA	b0997	0.44	+1.9
1,059,625	-	torA	b0997	0.45	+1.1
1,059,637	-	torA	b0997	0.45	+0.7
1,059,637	-	torA	b0997	0.45	+0.7
1,059,706	+	torA	b0997	0.48	+0.2
1,059,706	+	torA	b0997	0.48	+0.5
1,059,784	+	torA	b0997	0.51	+0.2
1,059,826	-	torA	b0997	0.53	+1.0
1,060,001	+	torA	b0997	0.60	-0.7
1,060,001	+	torA	b0997	0.60	-0.3
1,060,234	-	torA	b0997	0.69	+1.0
1,060,234	-	torA	b0997	0.69	+2.2
1,060,302	-	torA	b0997	0.72	-0.7
1,060,302	-	torA	b0997	0.72	+0.4
1,060,512	+	torA	b0997	0.80	+0.2
1,060,744	-	torA	b0997	0.89	-0.6
1,060,754	+	torA	b0997	0.89	+0.2
1,060,754	+	torA	b0997	0.89	-0.9
1,060,803	+				+0.1
1,060,826	-				-0.1
1,060,826	-				+0.2
1,060,847	-				+0.7
1,060,940	+				-0.1
1,060,989	+				-0.6
1,061,073	+				+0.2
1,061,083	-	torD	b0998	0.10	-0.2
1,061,747	-				+0.1
1,061,789	-				+0.4
1,061,879	-	cbpM	b0999	0.35	+0.1
1,061,889	-	cbpM	b0999	0.38	-0.3
1,061,978	-	cbpM	b0999	0.67	+0.5
1,061,978	-	cbpM	b0999	0.67	-0.0