Experiment: KB with Cantharidin 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4628 and Psyr_4629 overlap by 1 nucleotides Psyr_4629 and Psyr_4630 are separated by 23 nucleotides Psyr_4630 and Psyr_4631 are separated by 287 nucleotides
Psyr_4628: Psyr_4628 - Protein of unknown function DUF525, at 5,488,538 to 5,488,939
_4628
Psyr_4629: Psyr_4629 - Bis(5'-nucleosyl)-tetraphosphatase (symmetrical), at 5,488,939 to 5,489,814
_4629
Psyr_4630: Psyr_4630 - thiosulfate sulfurtransferase, at 5,489,838 to 5,490,158
_4630
Psyr_4631: Psyr_4631 - PrkA serine kinase, at 5,490,446 to 5,492,368
_4631
Position (kb) 5489
5490
5491 Strain fitness (log2 ratio) -2
-1
0
1 at 5488.856 kb on + strand, within Psyr_4628 at 5488.856 kb on + strand, within Psyr_4628 at 5490.064 kb on - strand, within Psyr_4630 at 5490.093 kb on + strand, within Psyr_4630 at 5490.093 kb on + strand, within Psyr_4630 at 5490.093 kb on + strand, within Psyr_4630 at 5490.093 kb on + strand, within Psyr_4630 at 5490.093 kb on + strand, within Psyr_4630 at 5490.093 kb on + strand, within Psyr_4630 at 5490.094 kb on - strand, within Psyr_4630 at 5490.159 kb on + strand at 5490.194 kb on + strand at 5490.195 kb on - strand at 5490.254 kb on + strand at 5490.273 kb on + strand at 5490.273 kb on + strand at 5490.274 kb on - strand at 5490.274 kb on - strand at 5490.274 kb on - strand at 5490.274 kb on - strand at 5490.274 kb on - strand at 5490.280 kb on - strand at 5490.285 kb on - strand at 5490.337 kb on - strand at 5490.340 kb on + strand at 5490.346 kb on + strand at 5490.375 kb on + strand at 5490.375 kb on + strand at 5490.375 kb on + strand at 5490.375 kb on + strand at 5490.376 kb on - strand at 5490.376 kb on - strand at 5490.376 kb on - strand at 5490.378 kb on + strand at 5490.378 kb on + strand at 5490.378 kb on + strand at 5490.379 kb on - strand at 5490.379 kb on - strand at 5490.379 kb on - strand at 5490.381 kb on + strand at 5490.382 kb on - strand at 5490.382 kb on - strand at 5490.451 kb on + strand at 5490.451 kb on + strand at 5490.451 kb on + strand at 5490.451 kb on + strand at 5490.451 kb on + strand at 5490.451 kb on + strand at 5490.452 kb on - strand at 5490.452 kb on - strand at 5490.452 kb on - strand at 5490.453 kb on + strand at 5490.453 kb on + strand at 5490.454 kb on - strand at 5490.454 kb on - strand at 5490.454 kb on - strand at 5490.454 kb on - strand at 5490.454 kb on - strand at 5490.515 kb on + strand at 5490.516 kb on - strand at 5490.548 kb on + strand at 5490.604 kb on + strand at 5490.604 kb on + strand at 5490.605 kb on - strand at 5490.651 kb on + strand, within Psyr_4631 at 5490.652 kb on - strand, within Psyr_4631 at 5490.764 kb on + strand, within Psyr_4631 at 5490.764 kb on + strand, within Psyr_4631 at 5490.764 kb on + strand, within Psyr_4631 at 5490.842 kb on + strand, within Psyr_4631 at 5490.842 kb on + strand, within Psyr_4631 at 5490.843 kb on - strand, within Psyr_4631 at 5490.843 kb on - strand, within Psyr_4631 at 5490.843 kb on - strand, within Psyr_4631 at 5490.843 kb on - strand, within Psyr_4631 at 5490.944 kb on + strand, within Psyr_4631 at 5490.944 kb on + strand, within Psyr_4631 at 5490.945 kb on - strand, within Psyr_4631
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Cantharidin 10 mM remove 5,488,856 + Psyr_4628 0.79 -0.6 5,488,856 + Psyr_4628 0.79 +0.2 5,490,064 - Psyr_4630 0.70 -1.3 5,490,093 + Psyr_4630 0.79 -0.1 5,490,093 + Psyr_4630 0.79 -0.1 5,490,093 + Psyr_4630 0.79 +0.3 5,490,093 + Psyr_4630 0.79 +0.1 5,490,093 + Psyr_4630 0.79 +0.3 5,490,093 + Psyr_4630 0.79 +0.2 5,490,094 - Psyr_4630 0.80 +0.1 5,490,159 + -0.1 5,490,194 + +0.2 5,490,195 - +1.0 5,490,254 + +0.3 5,490,273 + +0.1 5,490,273 + -1.5 5,490,274 - +0.4 5,490,274 - +0.2 5,490,274 - -0.2 5,490,274 - +0.4 5,490,274 - -0.1 5,490,280 - +0.1 5,490,285 - -0.6 5,490,337 - -2.0 5,490,340 + -0.3 5,490,346 + +0.1 5,490,375 + -0.9 5,490,375 + -0.4 5,490,375 + +0.2 5,490,375 + +0.3 5,490,376 - -0.7 5,490,376 - +0.5 5,490,376 - +0.3 5,490,378 + -0.0 5,490,378 + -0.1 5,490,378 + -1.0 5,490,379 - +0.6 5,490,379 - +0.3 5,490,379 - +0.3 5,490,381 + +0.3 5,490,382 - +0.1 5,490,382 - +0.7 5,490,451 + +0.8 5,490,451 + -0.2 5,490,451 + -0.9 5,490,451 + -0.9 5,490,451 + -0.7 5,490,451 + +1.1 5,490,452 - -2.1 5,490,452 - +0.2 5,490,452 - -0.0 5,490,453 + -0.4 5,490,453 + +0.3 5,490,454 - -0.7 5,490,454 - -1.5 5,490,454 - -1.9 5,490,454 - -0.3 5,490,454 - +0.4 5,490,515 + +0.4 5,490,516 - -0.2 5,490,548 + +0.4 5,490,604 + +0.4 5,490,604 + +0.4 5,490,605 - +0.8 5,490,651 + Psyr_4631 0.11 -0.5 5,490,652 - Psyr_4631 0.11 +0.2 5,490,764 + Psyr_4631 0.17 -0.5 5,490,764 + Psyr_4631 0.17 +0.0 5,490,764 + Psyr_4631 0.17 -0.1 5,490,842 + Psyr_4631 0.21 -0.3 5,490,842 + Psyr_4631 0.21 -0.6 5,490,843 - Psyr_4631 0.21 +1.7 5,490,843 - Psyr_4631 0.21 +1.5 5,490,843 - Psyr_4631 0.21 +0.5 5,490,843 - Psyr_4631 0.21 -0.3 5,490,944 + Psyr_4631 0.26 -0.6 5,490,944 + Psyr_4631 0.26 -0.3 5,490,945 - Psyr_4631 0.26 -0.3
Or see this region's nucleotide sequence