Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2914

Experiment: KB with Anabasine Hydrochloride 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Anabasine Hydrochloride 10 mM
3,497,050	+		Psyr_2913	0.45	+0.3
3,497,050	+		Psyr_2913	0.45	+0.8
3,497,050	+		Psyr_2913	0.45	+0.3
3,497,050	+		Psyr_2913	0.45	+0.2
3,497,050	+		Psyr_2913	0.45	-0.9
3,497,050	+		Psyr_2913	0.45	-0.1
3,497,051	-		Psyr_2913	0.45	-2.1
3,497,051	-		Psyr_2913	0.45	+1.0
3,497,051	-		Psyr_2913	0.45	+0.8
3,497,051	-		Psyr_2913	0.45	+0.4
3,497,051	-		Psyr_2913	0.45	+0.3
3,497,051	-		Psyr_2913	0.45	+2.0
3,497,051	-		Psyr_2913	0.45	-1.2
3,497,051	-		Psyr_2913	0.45	+0.8
3,497,051	-		Psyr_2913	0.45	-0.2
3,497,051	-		Psyr_2913	0.45	+0.7
3,497,105	-		Psyr_2913	0.51	+1.0
3,497,105	-		Psyr_2913	0.51	-0.5
3,497,342	+		Psyr_2913	0.77	+1.3
3,497,343	-		Psyr_2913	0.77	+1.5
3,497,381	-		Psyr_2913	0.81	+0.6
3,497,574	+				-1.2
3,497,574	+				-1.0
3,497,583	-				-2.8
3,497,617	-				-0.7
3,497,664	+				-0.6
3,497,665	-				-0.2
3,497,665	-				+0.7
3,497,684	-				-1.8
3,497,687	+				+0.3
3,497,736	+				-0.7
3,497,736	+				-1.8
3,497,736	+				-0.2
3,497,737	-				-2.2
3,497,754	+				-0.6
3,497,754	+				-2.0
3,497,761	+				-2.7
3,497,779	-				-1.0
3,497,796	-				-1.3
3,497,796	-				-0.7
3,497,796	-				-0.8
3,497,796	-				+0.3
3,497,799	+				+0.0
3,497,809	+				-0.6
3,497,839	+				-3.0
3,497,839	+				-2.0
3,497,839	+				-2.4
3,497,944	+				-1.6
3,497,944	+				-0.7
3,497,944	+				-1.0
3,497,945	-				-1.2
3,497,945	-				+1.2
3,497,978	+				-0.4
3,497,978	+				-0.8
3,497,979	-				-0.3
3,498,002	+				-3.9
3,498,006	+				-1.0
3,498,006	+				-0.5
3,498,006	+				-1.6
3,498,006	+				-1.6
3,498,006	+				-0.4
3,498,007	-				-0.4
3,498,059	-				-0.2
3,498,067	+				-2.3
3,498,067	+				-0.6
3,498,067	+				-0.6
3,498,068	-				-0.6
3,498,068	-				-1.0
3,498,068	-				+0.5
3,498,099	-				+0.2
3,498,130	+				+0.0
3,498,130	+				-0.7
3,498,130	+				-0.8
3,498,130	+				+0.0
3,498,131	-				+0.4
3,498,131	-				-0.7
3,498,134	+				-0.0
3,498,228	-				-0.4
3,498,272	+		Psyr_2914	0.11	-0.6
3,498,272	+		Psyr_2914	0.11	+0.3
3,498,273	-		Psyr_2914	0.11	-0.9
3,498,273	-		Psyr_2914	0.11	-0.6
3,498,275	+		Psyr_2914	0.11	+0.0
3,498,337	+		Psyr_2914	0.12	-1.3
3,498,338	-		Psyr_2914	0.12	-0.7
3,498,383	+		Psyr_2914	0.13	-0.4
3,498,397	-		Psyr_2914	0.14	-0.2
3,498,428	+		Psyr_2914	0.14	+0.2
3,498,484	+		Psyr_2914	0.16	-0.8
3,498,505	+		Psyr_2914	0.16	-0.3
3,498,506	-		Psyr_2914	0.16	-1.3
3,498,516	-		Psyr_2914	0.16	-1.2
3,498,540	+		Psyr_2914	0.17	-0.2
3,498,540	+		Psyr_2914	0.17	-2.8
3,498,540	+		Psyr_2914	0.17	-1.2
3,498,540	+		Psyr_2914	0.17	+0.3
3,498,540	+		Psyr_2914	0.17	+0.3
3,498,541	-		Psyr_2914	0.17	-0.2
3,498,541	-		Psyr_2914	0.17	-0.6
3,498,544	+		Psyr_2914	0.17	+0.2
3,498,544	+		Psyr_2914	0.17	-0.4
3,498,544	+		Psyr_2914	0.17	-1.4
3,498,544	+		Psyr_2914	0.17	-0.6
3,498,544	+		Psyr_2914	0.17	+0.8
3,498,545	-		Psyr_2914	0.17	+0.1
3,498,545	-		Psyr_2914	0.17	-0.9
3,498,545	-		Psyr_2914	0.17	-3.3
3,498,545	-		Psyr_2914	0.17	+0.6
3,498,545	-		Psyr_2914	0.17	+0.3
3,498,545	-		Psyr_2914	0.17	+1.1
3,498,545	-		Psyr_2914	0.17	-0.2
3,498,548	+		Psyr_2914	0.17	-0.2
3,498,548	+		Psyr_2914	0.17	-0.1
3,498,548	+		Psyr_2914	0.17	-1.0
3,498,548	+		Psyr_2914	0.17	+3.0
3,498,548	+		Psyr_2914	0.17	+1.0
3,498,548	+		Psyr_2914	0.17	-0.2
3,498,548	+		Psyr_2914	0.17	+0.0
3,498,549	-		Psyr_2914	0.17	+1.2
3,498,549	-		Psyr_2914	0.17	-0.6
3,498,549	-		Psyr_2914	0.17	+0.1
3,498,549	-		Psyr_2914	0.17	-0.7
3,498,549	-		Psyr_2914	0.17	+1.0
3,498,549	-		Psyr_2914	0.17	-0.5
3,498,549	-		Psyr_2914	0.17	-0.1
3,498,549	-		Psyr_2914	0.17	+0.6
3,498,549	-		Psyr_2914	0.17	-0.7
3,498,549	-		Psyr_2914	0.17	+0.3
3,498,549	-		Psyr_2914	0.17	+0.0
3,498,549	-		Psyr_2914	0.17	-0.7
3,498,593	-		Psyr_2914	0.18	-1.3
3,498,593	-		Psyr_2914	0.18	-0.5
3,498,593	-		Psyr_2914	0.18	+0.4
3,498,595	+		Psyr_2914	0.18	-1.1
3,498,595	+		Psyr_2914	0.18	+0.0
3,498,595	+		Psyr_2914	0.18	+0.0
3,498,596	-		Psyr_2914	0.18	+0.0
3,498,637	+		Psyr_2914	0.19	-1.1
3,498,637	+		Psyr_2914	0.19	-1.6
3,498,638	-		Psyr_2914	0.19	-0.7
3,498,638	-		Psyr_2914	0.19	+1.0
3,498,813	+		Psyr_2914	0.23	+0.4
3,498,839	-		Psyr_2914	0.24	-0.2
3,498,839	-		Psyr_2914	0.24	+0.3
3,498,921	+		Psyr_2914	0.25	-2.6
3,498,921	+		Psyr_2914	0.25	-1.1
3,498,921	+		Psyr_2914	0.25	-0.4
3,498,922	-		Psyr_2914	0.26	+0.6
3,498,922	-		Psyr_2914	0.26	-0.3
3,499,014	-		Psyr_2914	0.28	-0.7
3,499,028	+		Psyr_2914	0.28	-2.3
3,499,029	-		Psyr_2914	0.28	-1.8
3,499,029	-		Psyr_2914	0.28	-0.6
3,499,029	-		Psyr_2914	0.28	-0.3
3,499,066	+		Psyr_2914	0.29	+0.0
3,499,066	+		Psyr_2914	0.29	+0.0
3,499,066	+		Psyr_2914	0.29	-1.8
3,499,066	+		Psyr_2914	0.29	-1.6
3,499,067	-		Psyr_2914	0.29	+0.0
3,499,067	-		Psyr_2914	0.29	+0.3
3,499,067	-		Psyr_2914	0.29	-1.1
3,499,067	-		Psyr_2914	0.29	-0.9
3,499,067	-		Psyr_2914	0.29	+0.6
3,499,067	-		Psyr_2914	0.29	+0.0
3,499,068	+		Psyr_2914	0.29	-2.4
3,499,068	+		Psyr_2914	0.29	-2.9
3,499,068	+		Psyr_2914	0.29	+1.6
3,499,069	-		Psyr_2914	0.29	-0.6
3,499,069	-		Psyr_2914	0.29	+0.9
3,499,069	-		Psyr_2914	0.29	+0.3
3,499,070	+		Psyr_2914	0.29	-2.0
3,499,070	+		Psyr_2914	0.29	+0.6
3,499,071	-		Psyr_2914	0.29	+0.3
3,499,098	-		Psyr_2914	0.29	-1.1
3,499,098	-		Psyr_2914	0.29	-0.4
3,499,098	-		Psyr_2914	0.29	-1.0
3,499,098	-		Psyr_2914	0.29	+0.3
3,499,158	+		Psyr_2914	0.31	-1.9
3,499,177	+		Psyr_2914	0.31	+1.0
3,499,177	+		Psyr_2914	0.31	-1.3
3,499,178	-		Psyr_2914	0.31	-0.8
3,499,178	-		Psyr_2914	0.31	-0.3
3,499,178	-		Psyr_2914	0.31	-0.6
3,499,178	-		Psyr_2914	0.31	+0.3
3,499,178	-		Psyr_2914	0.31	-0.7
3,499,188	-		Psyr_2914	0.32	-0.3
3,499,192	+		Psyr_2914	0.32	-0.4
3,499,192	+		Psyr_2914	0.32	-1.3
3,499,192	+		Psyr_2914	0.32	-2.2
3,499,192	+		Psyr_2914	0.32	-2.0
3,499,193	-		Psyr_2914	0.32	+0.4
3,499,193	-		Psyr_2914	0.32	-1.0
3,499,193	-		Psyr_2914	0.32	+0.3
3,499,193	-		Psyr_2914	0.32	-1.3
3,499,212	-		Psyr_2914	0.32	-0.6
3,499,230	-		Psyr_2914	0.32	-0.4
3,499,327	+		Psyr_2914	0.35	-2.2
3,499,397	+		Psyr_2914	0.36	-1.4
3,499,397	+		Psyr_2914	0.36	-1.3
3,499,397	+		Psyr_2914	0.36	-1.3
3,499,398	-		Psyr_2914	0.36	-0.9
3,499,398	-		Psyr_2914	0.36	-2.0
3,499,398	-		Psyr_2914	0.36	-0.6
3,499,398	-		Psyr_2914	0.36	-1.0
3,499,498	-		Psyr_2914	0.39	-0.9
3,499,638	+		Psyr_2914	0.42	-1.3
3,499,639	-		Psyr_2914	0.42	+1.0
3,499,686	+		Psyr_2914	0.43	-1.7
3,499,686	+		Psyr_2914	0.43	+0.0
3,499,686	+		Psyr_2914	0.43	-1.3
3,499,686	+		Psyr_2914	0.43	-0.1
3,499,686	+		Psyr_2914	0.43	-0.2
3,499,686	+		Psyr_2914	0.43	+1.4
3,499,686	+		Psyr_2914	0.43	-0.9
3,499,686	+		Psyr_2914	0.43	-1.0
3,499,686	+		Psyr_2914	0.43	-0.4
3,499,686	+		Psyr_2914	0.43	+0.3
3,499,686	+		Psyr_2914	0.43	-1.3
3,499,687	-		Psyr_2914	0.43	+0.5
3,499,687	-		Psyr_2914	0.43	-0.6
3,499,687	-		Psyr_2914	0.43	-1.7
3,499,687	-		Psyr_2914	0.43	+1.1
3,499,687	-		Psyr_2914	0.43	+1.0
3,499,690	+		Psyr_2914	0.43	+0.1
3,499,691	-		Psyr_2914	0.43	-0.6
3,499,691	-		Psyr_2914	0.43	-0.5
3,499,705	+		Psyr_2914	0.43	-0.7
3,499,706	-		Psyr_2914	0.43	-0.1
3,499,748	+		Psyr_2914	0.44	-2.4
3,499,772	+		Psyr_2914	0.45	-0.3
3,499,905	-		Psyr_2914	0.48	-0.7
3,499,974	-		Psyr_2914	0.49	+0.6
3,499,974	-		Psyr_2914	0.49	+2.6
3,499,981	+		Psyr_2914	0.49	-0.4
3,499,982	-		Psyr_2914	0.49	+1.2
3,499,982	-		Psyr_2914	0.49	+0.7
3,499,982	-		Psyr_2914	0.49	+1.6
3,499,982	-		Psyr_2914	0.49	-0.3
3,499,982	-		Psyr_2914	0.49	-1.7
3,499,982	-		Psyr_2914	0.49	+0.5
3,500,022	+		Psyr_2914	0.50	-1.2
3,500,023	-		Psyr_2914	0.50	+0.4
3,500,023	-		Psyr_2914	0.50	-1.5
3,500,023	-		Psyr_2914	0.50	+1.0
3,500,073	+		Psyr_2914	0.52	-0.2
3,500,073	+		Psyr_2914	0.52	+0.2
3,500,073	+		Psyr_2914	0.52	+0.3
3,500,074	-		Psyr_2914	0.52	+0.6
3,500,074	-		Psyr_2914	0.52	-1.2
3,500,074	-		Psyr_2914	0.52	-0.2
3,500,074	-		Psyr_2914	0.52	-0.7
3,500,074	-		Psyr_2914	0.52	+1.6
3,500,074	-		Psyr_2914	0.52	-0.6
3,500,074	-		Psyr_2914	0.52	-0.2
3,500,074	-		Psyr_2914	0.52	+0.9
3,500,181	+		Psyr_2914	0.54	+1.5
3,500,181	+		Psyr_2914	0.54	-0.2
3,500,181	+		Psyr_2914	0.54	+0.2
3,500,181	+		Psyr_2914	0.54	+0.6
3,500,181	+		Psyr_2914	0.54	+1.0
3,500,182	-		Psyr_2914	0.54	-0.4
3,500,182	-		Psyr_2914	0.54	-0.8
3,500,269	-		Psyr_2914	0.56	-0.7
3,500,338	-		Psyr_2914	0.58	-2.6
3,500,455	+		Psyr_2914	0.60	-0.6
3,500,461	-		Psyr_2914	0.60	-0.6
3,500,461	-		Psyr_2914	0.60	-0.6
3,500,461	-		Psyr_2914	0.60	-0.1
3,500,461	-		Psyr_2914	0.60	-1.9
3,500,461	-		Psyr_2914	0.60	+0.3
3,500,507	+		Psyr_2914	0.61	-1.4
3,500,507	+		Psyr_2914	0.61	-1.3
3,500,507	+		Psyr_2914	0.61	-1.9
3,500,507	+		Psyr_2914	0.61	-0.4
3,500,507	+		Psyr_2914	0.61	-1.5
3,500,507	+		Psyr_2914	0.61	-0.3
3,500,508	-		Psyr_2914	0.61	+1.0
3,500,508	-		Psyr_2914	0.61	-0.1
3,500,509	+		Psyr_2914	0.61	-2.3
3,500,509	+		Psyr_2914	0.61	-3.2
3,500,509	+		Psyr_2914	0.61	-0.6
3,500,509	+		Psyr_2914	0.61	-0.3
3,500,510	-		Psyr_2914	0.61	-0.6
3,500,510	-		Psyr_2914	0.61	+0.2
3,500,510	-		Psyr_2914	0.61	+0.9
3,500,520	+		Psyr_2914	0.62	-0.6
3,500,520	+		Psyr_2914	0.62	-1.6
3,500,521	-		Psyr_2914	0.62	+1.1
3,500,638	-		Psyr_2914	0.64	+0.0
3,500,651	+		Psyr_2914	0.65	-1.4
3,500,652	-		Psyr_2914	0.65	+3.2
3,500,652	-		Psyr_2914	0.65	-0.3
3,500,661	+		Psyr_2914	0.65	-1.0
3,500,859	+		Psyr_2914	0.69	-0.7
3,500,859	+		Psyr_2914	0.69	+0.0
3,500,859	+		Psyr_2914	0.69	+0.4
3,500,860	-		Psyr_2914	0.69	+1.4
3,500,860	-		Psyr_2914	0.69	-1.8
3,500,860	-		Psyr_2914	0.69	+0.3
3,500,860	-		Psyr_2914	0.69	-0.6
3,500,862	+		Psyr_2914	0.69	-0.4
3,500,863	-		Psyr_2914	0.69	-0.8
3,501,030	-		Psyr_2914	0.73	+0.6
3,501,030	-		Psyr_2914	0.73	-0.2
3,501,037	+		Psyr_2914	0.73	+0.0
3,501,038	-		Psyr_2914	0.73	-0.5
3,501,085	+		Psyr_2914	0.74	-0.5
3,501,086	-		Psyr_2914	0.74	+0.8
3,501,086	-		Psyr_2914	0.74	-1.1
3,501,086	-		Psyr_2914	0.74	-0.7
3,501,086	-		Psyr_2914	0.74	+0.1
3,501,086	-		Psyr_2914	0.74	-0.1
3,501,086	-		Psyr_2914	0.74	-1.4
3,501,090	-		Psyr_2914	0.75	+0.3
3,501,090	-		Psyr_2914	0.75	+0.0
3,501,090	-		Psyr_2914	0.75	+1.2
3,501,090	-		Psyr_2914	0.75	+0.8
3,501,121	+		Psyr_2914	0.75	-2.0
3,501,121	+		Psyr_2914	0.75	-0.4
3,501,121	+		Psyr_2914	0.75	-2.3
3,501,180	+		Psyr_2914	0.77	+2.6
3,501,216	+		Psyr_2914	0.77	-0.9
3,501,217	-		Psyr_2914	0.77	+0.7
3,501,254	+		Psyr_2914	0.78	+0.5
3,501,254	+		Psyr_2914	0.78	-2.1
3,501,254	+		Psyr_2914	0.78	-1.3
3,501,254	+		Psyr_2914	0.78	+0.1
3,501,255	-		Psyr_2914	0.78	+0.3
3,501,352	+		Psyr_2914	0.80	-2.3
3,501,353	-		Psyr_2914	0.80	-0.2
3,501,353	-		Psyr_2914	0.80	+0.2
3,501,353	-		Psyr_2914	0.80	-1.8
3,501,367	+		Psyr_2914	0.81	+0.8
3,501,368	-		Psyr_2914	0.81	+1.9
3,501,451	-		Psyr_2914	0.83	+0.2
3,501,589	+		Psyr_2914	0.86	-2.3
3,501,590	-		Psyr_2914	0.86	-0.1
3,501,590	-		Psyr_2914	0.86	+3.5
3,501,593	+		Psyr_2914	0.86	-0.6
3,501,593	+		Psyr_2914	0.86	-1.1
3,501,593	+		Psyr_2914	0.86	-0.6
3,501,593	+		Psyr_2914	0.86	-0.8
3,501,593	+		Psyr_2914	0.86	+0.1
3,501,593	+		Psyr_2914	0.86	-1.0
3,501,594	-		Psyr_2914	0.86	+0.8
3,501,594	-		Psyr_2914	0.86	+0.2
3,501,594	-		Psyr_2914	0.86	-1.2
3,501,594	-		Psyr_2914	0.86	+0.6
3,501,600	-		Psyr_2914	0.86	+0.8
3,501,699	+		Psyr_2914	0.88	+0.0
3,501,832	+				+1.0
3,501,874	+				-2.0
3,502,012	+				-3.6
3,502,050	+				-0.7
3,502,061	+				-0.4
3,502,062	-				-0.5
3,502,156	-				-1.4
3,502,156	-				-1.5
3,502,235	+				+0.2
3,502,236	-				+1.0
3,502,348	+				-0.6
3,502,348	+				+0.8
3,502,348	+				-0.2
3,502,348	+				-1.3
3,502,349	-				-1.3
3,502,349	-				-0.5
3,502,411	-				-0.5
3,502,460	+				+0.7
3,502,489	-				-1.8
3,502,586	+				-0.9
3,502,651	+				-2.8
3,502,651	+				-0.6
3,502,652	-				-2.9
3,502,670	-				-1.0
3,502,670	-				-0.0
3,502,693	+				+1.8
3,502,694	-				+0.5
3,502,699	+				+0.5
3,502,700	-				+0.2
3,502,735	+				+0.4
3,502,736	-				-2.7
3,502,736	-				-1.1
3,502,736	-				-0.4
3,502,736	-				-0.4
3,502,804	-				-2.3
3,502,804	-				-0.5
3,502,848	+				+1.2
3,502,848	+				+0.5
3,502,848	+				-0.4
3,502,849	-				-0.9
3,502,849	-				+0.3
3,502,852	+				-0.9
3,502,853	-				+0.3
3,502,853	-				-0.2
3,502,853	-				-1.7
3,502,853	-				-0.9
3,502,853	-				+1.3
3,502,853	-				+0.4
3,502,912	-				-0.3
3,502,912	-				+1.6
3,502,949	+				-2.2
3,502,949	+				-1.0
3,502,950	-				+1.0
3,503,005	-				+0.5
3,503,060	+				-0.7
3,503,103	+				+0.2
3,503,103	+				-1.6
3,503,104	-				-0.6
3,503,104	-				-0.6
3,503,163	-				-0.7
3,503,191	+				+0.3
3,503,191	+				+0.4
3,503,192	-				-1.7
3,503,192	-				+0.0
3,503,192	-				+0.4
3,503,204	+				-1.0
3,503,205	-				-0.5
3,503,205	-				-0.3