Strain Fitness in Escherichia coli BW25113 around b0136

Experiment: LB Anaerobic with Ceftriaxone hemi(heptahydrate) 0.000000625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB Anaerobic with Ceftriaxone hemi(heptahydrate) 0.000000625 mM
150,012	+	yadC	b0135	0.24	+0.8
150,014	+	yadC	b0135	0.24	-0.9
150,014	+	yadC	b0135	0.24	-0.2
150,018	+	yadC	b0135	0.24	+2.1
150,018	+	yadC	b0135	0.24	+1.0
150,135	-	yadC	b0135	0.34	-0.8
150,156	+	yadC	b0135	0.36	-0.8
150,156	+	yadC	b0135	0.36	-0.3
150,156	+	yadC	b0135	0.36	+0.5
150,159	+	yadC	b0135	0.36	+0.2
150,164	+	yadC	b0135	0.36	-0.7
150,167	-	yadC	b0135	0.36	+2.5
150,170	+	yadC	b0135	0.37	-0.1
150,177	-	yadC	b0135	0.37	-0.5
150,179	+	yadC	b0135	0.37	-0.1
150,179	+	yadC	b0135	0.37	+0.3
150,179	+	yadC	b0135	0.37	+0.5
150,179	+	yadC	b0135	0.37	-0.8
150,179	+	yadC	b0135	0.37	+1.1
150,179	+	yadC	b0135	0.37	+1.5
150,179	+	yadC	b0135	0.37	-1.3
150,186	+	yadC	b0135	0.38	+0.1
150,187	-	yadC	b0135	0.38	+1.5
150,187	-	yadC	b0135	0.38	+1.5
150,226	+	yadC	b0135	0.41	+1.5
150,257	+	yadC	b0135	0.44	+1.5
150,259	+	yadC	b0135	0.44	-0.5
150,263	+	yadC	b0135	0.44	+1.5
150,269	+	yadC	b0135	0.45	+1.5
150,269	+	yadC	b0135	0.45	+1.5
150,269	+	yadC	b0135	0.45	+1.5
150,269	+	yadC	b0135	0.45	+1.5
150,276	+	yadC	b0135	0.45	-1.8
150,276	+	yadC	b0135	0.45	-1.1
150,277	+	yadC	b0135	0.45	+1.5
150,277	+	yadC	b0135	0.45	+1.3
150,277	-	yadC	b0135	0.45	+0.5
150,277	-	yadC	b0135	0.45	+1.5
150,283	+	yadC	b0135	0.46	+1.5
150,326	-	yadC	b0135	0.49	+1.5
150,327	-	yadC	b0135	0.49	+1.5
150,376	+	yadC	b0135	0.53	+1.5
150,389	+	yadC	b0135	0.54	+1.5
150,389	+	yadC	b0135	0.54	+1.5
150,391	+	yadC	b0135	0.55	+1.5
150,391	+	yadC	b0135	0.55	+1.5
150,391	+	yadC	b0135	0.55	+1.5
150,393	+	yadC	b0135	0.55	-0.1
150,397	-	yadC	b0135	0.55	+1.5
150,420	+	yadC	b0135	0.57	-0.5
150,438	+	yadC	b0135	0.58	+1.5
150,446	+	yadC	b0135	0.59	+1.5
150,453	+	yadC	b0135	0.60	+1.5
150,459	+	yadC	b0135	0.60	+1.5
150,535	+	yadC	b0135	0.66	+1.5
150,539	+	yadC	b0135	0.67	+0.5
150,539	+	yadC	b0135	0.67	+0.5
150,561	+	yadC	b0135	0.68	+1.5
150,562	+	yadC	b0135	0.68	+0.5
150,571	+	yadC	b0135	0.69	+1.5
150,590	-	yadC	b0135	0.71	+0.2
150,639	-	yadC	b0135	0.75	+1.5
150,639	-	yadC	b0135	0.75	+1.5
150,675	-	yadC	b0135	0.77	+1.5
150,675	-	yadC	b0135	0.77	+1.5
150,710	+	yadC	b0135	0.80	+1.5
150,712	+	yadC	b0135	0.80	+1.5
150,718	-	yadC	b0135	0.81	+1.5
150,725	+	yadC	b0135	0.82	+1.5
150,725	+	yadC	b0135	0.82	+1.5
150,725	+	yadC	b0135	0.82	+1.5
150,726	-	yadC	b0135	0.82	-0.1
150,726	-	yadC	b0135	0.82	+0.2
150,726	-	yadC	b0135	0.82	-0.1
150,740	+	yadC	b0135	0.83	-0.1
150,740	+	yadC	b0135	0.83	+1.5
150,740	+	yadC	b0135	0.83	+1.5
150,749	+	yadC	b0135	0.83	+0.5
150,749	+	yadC	b0135	0.83	+1.5
150,764	+	yadC	b0135	0.85	+0.5
150,764	+				+1.5
150,769	+	yadC	b0135	0.85	+0.5
150,769	+	yadC	b0135	0.85	+0.5
150,769	+	yadC	b0135	0.85	-0.1
150,819	+	yadC	b0135	0.89	+1.9
150,821	+	yadC	b0135	0.89	-0.1
150,828	+	yadC	b0135	0.90	+1.5
150,829	+	yadC	b0135	0.90	-0.2
150,834	-				+1.5
150,838	+				+1.5
150,841	+				+1.5
150,843	+				+1.5
150,888	+				+1.5
150,889	+				+1.5
150,944	-				+1.5
150,944	-				+1.5
151,041	-				-2.4
151,042	-				+0.0
151,042	-				+0.5
151,049	+				+1.5
151,050	+				+1.5
151,050	+				+1.5
151,050	+				+1.5
151,058	-				+1.5
151,062	+				+1.5
151,119	+	yadK	b0136	0.19	+1.5
151,124	-	yadK	b0136	0.20	+1.5
151,126	-	yadK	b0136	0.21	+1.5
151,160	+	yadK	b0136	0.26	+1.5
151,161	-	yadK	b0136	0.26	+1.5
151,189	+	yadK	b0136	0.31	+1.5
151,229	-	yadK	b0136	0.38	+0.5
151,229	-	yadK	b0136	0.38	+1.5
151,271	-	yadK	b0136	0.45	+0.5
151,274	-	yadK	b0136	0.45	-1.3
151,274	-	yadK	b0136	0.45	-0.1
151,274	-	yadK	b0136	0.45	+1.5
151,278	-	yadK	b0136	0.46	+1.5
151,280	-	yadK	b0136	0.46	+1.5
151,290	-	yadK	b0136	0.48	+1.5
151,295	-	yadK	b0136	0.49	+0.5
151,295	-	yadK	b0136	0.49	+1.5
151,320	-	yadK	b0136	0.53	+1.5
151,320	-	yadK	b0136	0.53	+1.5
151,328	-	yadK	b0136	0.54	+0.5
151,328	-	yadK	b0136	0.54	+1.5
151,331	-	yadK	b0136	0.55	+1.5
151,333	+	yadK	b0136	0.55	+1.5
151,338	+	yadK	b0136	0.56	+1.5
151,338	+	yadK	b0136	0.56	+1.5
151,343	+	yadK	b0136	0.57	+1.5
151,351	-	yadK	b0136	0.58	+0.5
151,351	-	yadK	b0136	0.58	+1.5
151,353	+	yadK	b0136	0.59	+1.5
151,376	+	yadK	b0136	0.62	+1.5
151,387	+	yadK	b0136	0.64	+1.5
151,387	+	yadK	b0136	0.64	+1.5
151,450	+	yadK	b0136	0.75	-0.1
151,450	+	yadK	b0136	0.75	+0.5
151,475	+	yadK	b0136	0.79	+1.2
151,482	+	yadK	b0136	0.80	+1.5
151,483	-	yadK	b0136	0.80	-0.1
151,501	+	yadK	b0136	0.83	-0.5
151,509	-	yadK	b0136	0.85	+1.5
151,520	-	yadK	b0136	0.87	+0.9
151,520	-	yadK	b0136	0.87	+0.9
151,534	-	yadK	b0136	0.89	-0.1
151,543	-				+1.2
151,576	-				-0.1
151,585	-				+0.4
151,585	-				+0.8
151,585	-				-0.1
151,585	-				-1.4
151,585	-				+0.2
151,585	-				-0.1
151,589	+				+1.5
151,599	-				+0.2
151,605	-				-1.8
151,633	-				+1.5
151,636	-				+1.5
151,636	-				+1.2
151,636	-				+0.2
151,642	-				-0.2
151,648	-				+0.4
151,648	-				-1.5
151,653	-				+0.5
151,665	-				-0.3
151,667	-				+1.5
151,667	-				+0.5
151,715	-	yadL	b0137	0.15	+0.2
151,720	-	yadL	b0137	0.16	-0.5
151,720	-	yadL	b0137	0.16	+0.4
151,720	-	yadL	b0137	0.16	-0.1
151,720	-	yadL	b0137	0.16	-1.5
151,720	-	yadL	b0137	0.16	-0.5
151,720	-	yadL	b0137	0.16	+2.3
151,720	-	yadL	b0137	0.16	-1.4
151,720	-	yadL	b0137	0.16	-0.8
151,749	-	yadL	b0137	0.20	-0.1
151,756	-	yadL	b0137	0.21	+0.5
151,761	-	yadL	b0137	0.22	+0.5
151,763	-	yadL	b0137	0.23	-0.8
151,766	-	yadL	b0137	0.23	+0.5
151,766	-	yadL	b0137	0.23	+2.5
151,766	-	yadL	b0137	0.23	-0.3
151,767	+	yadL	b0137	0.23	+1.5
151,768	-	yadL	b0137	0.23	+2.5
151,775	+	yadL	b0137	0.25	+1.5
151,775	+	yadL	b0137	0.25	+1.5
151,775	-	yadL	b0137	0.25	+0.9
151,775	-	yadL	b0137	0.25	+1.5
151,777	-	yadL	b0137	0.25	-0.5
151,781	+	yadL	b0137	0.26	-0.4
151,789	-	yadL	b0137	0.27	+0.5
151,789	-	yadL	b0137	0.27	+1.2
151,789	-	yadL	b0137	0.27	-0.1
151,789	-	yadL	b0137	0.27	-0.1
151,789	-	yadL	b0137	0.27	-0.5
151,789	-	yadL	b0137	0.27	-0.1
151,789	-	yadL	b0137	0.27	+0.8
151,799	-	yadL	b0137	0.29	+0.2
151,799	-	yadL	b0137	0.29	+1.5
151,809	+	yadL	b0137	0.30	+1.5
151,810	-	yadL	b0137	0.30	+0.5
151,820	+	yadL	b0137	0.32	+1.5
151,820	+	yadL	b0137	0.32	+1.5
151,820	+	yadL	b0137	0.32	+1.5
151,820	+	yadL	b0137	0.32	+1.5
151,820	+	yadL	b0137	0.32	+1.5
151,820	+	yadL	b0137	0.32	+1.5
151,820	+	yadL	b0137	0.32	+1.5
151,825	+	yadL	b0137	0.33	+1.5
151,828	-	yadL	b0137	0.33	+0.5
151,830	+	yadL	b0137	0.34	-0.1
151,830	+	yadL	b0137	0.34	+1.5
151,836	-	yadL	b0137	0.35	+1.5
151,836	-	yadL	b0137	0.35	+1.5
151,890	-	yadL	b0137	0.44	+1.5
151,890	-	yadL	b0137	0.44	+1.5
151,892	+	yadL	b0137	0.44	-0.1
151,899	+	yadL	b0137	0.45	+1.5
151,899	+	yadL	b0137	0.45	+1.5
151,899	+	yadL	b0137	0.45	+0.5
151,913	+	yadL	b0137	0.47	+1.1
151,914	+	yadL	b0137	0.48	+0.5
151,914	+	yadL	b0137	0.48	+0.2
151,918	+	yadL	b0137	0.48	-0.1
151,964	+	yadL	b0137	0.56	+1.5
151,964	+	yadL	b0137	0.56	+0.5
151,964	+	yadL	b0137	0.56	+0.5
151,974	+	yadL	b0137	0.57	-0.4
152,002	+	yadL	b0137	0.62	+0.5
152,071	+	yadL	b0137	0.73	+1.5
152,085	-	yadL	b0137	0.76	+1.5
152,090	+	yadL	b0137	0.77	+1.5
152,090	+	yadL	b0137	0.77	+1.5
152,097	-	yadL	b0137	0.78	+1.5
152,097	-	yadL	b0137	0.78	+1.5
152,111	-	yadL	b0137	0.80	+1.5
152,127	-	yadL	b0137	0.83	+1.5
152,127	-	yadL	b0137	0.83	+0.5
152,137	-	yadL	b0137	0.84	-1.1
152,137	-	yadL	b0137	0.84	+1.5
152,137	-	yadL	b0137	0.84	+1.5
152,137	-	yadL	b0137	0.84	-0.5
152,142	-	yadL	b0137	0.85	+1.5
152,142	-	yadL	b0137	0.85	+1.5
152,149	-	yadL	b0137	0.86	+1.5
152,149	-	yadL	b0137	0.86	+1.5
152,149	-	yadL	b0137	0.86	+0.5
152,156	+	yadL	b0137	0.87	+1.5
152,157	-	yadL	b0137	0.88	+0.5
152,161	+	yadL	b0137	0.88	+0.8
152,162	-	yadL	b0137	0.88	+0.5
152,162	-	yadL	b0137	0.88	-0.1
152,162	-	yadL	b0137	0.88	+1.5
152,164	-	yadL	b0137	0.89	+1.5
152,174	-				+1.5
152,183	+				+1.5
152,183	+				+1.5
152,187	-				+1.5
152,204	-				+1.5
152,302	-	yadM	b0138	0.10	-0.5
152,308	-	yadM	b0138	0.11	-0.1
152,308	-	yadM	b0138	0.11	+1.0
152,313	-	yadM	b0138	0.12	-1.3
152,313	-	yadM	b0138	0.12	+1.2
152,318	-	yadM	b0138	0.13	+0.5
152,318	-	yadM	b0138	0.13	+0.5
152,325	-	yadM	b0138	0.14	+0.9
152,325	-	yadM	b0138	0.14	+0.8
152,332	+	yadM	b0138	0.16	+1.5
152,333	+	yadM	b0138	0.16	+0.9
152,340	-	yadM	b0138	0.17	-0.1
152,343	+	yadM	b0138	0.18	-0.1
152,343	+	yadM	b0138	0.18	-0.1
152,357	-	yadM	b0138	0.20	-0.8
152,362	-	yadM	b0138	0.21	+0.9
152,362	-	yadM	b0138	0.21	-0.1
152,362	-	yadM	b0138	0.21	-0.5
152,362	-	yadM	b0138	0.21	-1.3
152,366	+	yadM	b0138	0.22	+1.5
152,372	-	yadM	b0138	0.23	-0.5
152,380	+	yadM	b0138	0.24	+0.5
152,388	+	yadM	b0138	0.25	+1.2
152,388	+	yadM	b0138	0.25	+2.5
152,390	+	yadM	b0138	0.26	+0.5
152,390	+	yadM	b0138	0.26	-1.4
152,421	-	yadM	b0138	0.31	+1.5
152,421	-	yadM	b0138	0.31	+1.5
152,439	+	yadM	b0138	0.34	+0.5
152,458	+	yadM	b0138	0.38	+0.5
152,458	+	yadM	b0138	0.38	+1.5
152,475	+	yadM	b0138	0.41	-1.3
152,475	-	yadM	b0138	0.41	+1.5
152,477	+	yadM	b0138	0.41	+1.5
152,487	-	yadM	b0138	0.43	+1.5
152,487	-	yadM	b0138	0.43	+0.5
152,491	+	yadM	b0138	0.44	+1.5
152,491	+	yadM	b0138	0.44	+1.5
152,498	-	yadM	b0138	0.45	+0.2
152,499	-	yadM	b0138	0.45	+3.1
152,499	-	yadM	b0138	0.45	-1.8
152,509	-	yadM	b0138	0.47	+1.5
152,518	+	yadM	b0138	0.48	-1.1
152,519	+	yadM	b0138	0.48	+1.5
152,522	-	yadM	b0138	0.49	-0.1
152,522	-	yadM	b0138	0.49	+0.2
152,524	+	yadM	b0138	0.49	+1.5
152,524	+	yadM	b0138	0.49	+0.3
152,524	+	yadM	b0138	0.49	+1.5
152,524	+	yadM	b0138	0.49	-0.1
152,524	+	yadM	b0138	0.49	+1.5
152,524	+	yadM	b0138	0.49	+0.5
152,524	+	yadM	b0138	0.49	+1.5
152,525	+	yadM	b0138	0.49	+1.5
152,529	+	yadM	b0138	0.50	+1.5
152,532	-	yadM	b0138	0.51	+0.5
152,532	-	yadM	b0138	0.51	+1.5
152,537	-	yadM	b0138	0.52	+0.5
152,541	-	yadM	b0138	0.52	+1.5
152,545	+	yadM	b0138	0.53	+1.5
152,550	+	yadM	b0138	0.54	+1.5
152,550	+	yadM	b0138	0.54	+1.5
152,550	+	yadM	b0138	0.54	+1.5
152,550	+	yadM	b0138	0.54	+1.5
152,550	+	yadM	b0138	0.54	+1.5
152,552	+	yadM	b0138	0.54	+0.5
152,561	+	yadM	b0138	0.56	+1.5
152,561	+	yadM	b0138	0.56	+1.5