Strain Fitness in Escherichia coli BW25113 around b2271

Experiment: LB Anaerobic with Benzethonium chloride 0.000015625 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntyfbK and yfbL are separated by 137 nucleotidesyfbL and yfbM are separated by 102 nucleotidesyfbM and yfbN are separated by 272 nucleotides b2270: yfbK - hypothetical protein (NCBI), at 2,382,017 to 2,383,744 yfbK b2271: yfbL - putative aminopeptidase (VIMSS), at 2,383,882 to 2,384,853 yfbL b2272: yfbM - hypothetical protein (NCBI), at 2,384,956 to 2,385,459 yfbM b2273: yfbN - hypothetical protein (NCBI), at 2,385,732 to 2,386,448 yfbN Position (kb) 2383 2384 2385Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2382.883 kb on - strand, within yfbKat 2382.893 kb on - strand, within yfbKat 2382.917 kb on - strand, within yfbKat 2382.917 kb on - strand, within yfbKat 2382.917 kb on - strand, within yfbKat 2382.930 kb on - strand, within yfbKat 2382.938 kb on - strand, within yfbKat 2382.939 kb on + strand, within yfbKat 2382.949 kb on + strand, within yfbKat 2382.949 kb on + strand, within yfbKat 2382.960 kb on - strand, within yfbKat 2382.960 kb on - strand, within yfbKat 2382.960 kb on - strand, within yfbKat 2382.960 kb on - strand, within yfbKat 2382.969 kb on + strand, within yfbKat 2382.987 kb on + strand, within yfbKat 2382.987 kb on + strand, within yfbKat 2382.989 kb on + strand, within yfbKat 2382.995 kb on - strand, within yfbKat 2382.995 kb on - strand, within yfbKat 2382.995 kb on - strand, within yfbKat 2383.000 kb on + strand, within yfbKat 2383.044 kb on - strand, within yfbKat 2383.044 kb on - strand, within yfbKat 2383.049 kb on - strand, within yfbKat 2383.096 kb on + strand, within yfbKat 2383.112 kb on - strand, within yfbKat 2383.112 kb on - strand, within yfbKat 2383.112 kb on - strand, within yfbKat 2383.182 kb on + strand, within yfbKat 2383.182 kb on + strand, within yfbKat 2383.190 kb on + strand, within yfbKat 2383.198 kb on + strand, within yfbKat 2383.215 kb on + strand, within yfbKat 2383.218 kb on - strand, within yfbKat 2383.282 kb on + strand, within yfbKat 2383.282 kb on + strand, within yfbKat 2383.299 kb on - strand, within yfbKat 2383.299 kb on - strand, within yfbKat 2383.302 kb on + strand, within yfbKat 2383.342 kb on + strand, within yfbKat 2383.350 kb on + strand, within yfbKat 2383.360 kb on - strand, within yfbKat 2383.360 kb on - strand, within yfbKat 2383.465 kb on - strand, within yfbKat 2383.467 kb on - strand, within yfbKat 2383.479 kb on - strand, within yfbKat 2383.515 kb on + strand, within yfbKat 2383.538 kb on + strand, within yfbKat 2383.546 kb on + strand, within yfbKat 2383.553 kb on - strand, within yfbKat 2383.624 kb on + strandat 2383.633 kb on + strandat 2383.633 kb on + strandat 2383.635 kb on + strandat 2383.639 kb on - strandat 2383.641 kb on + strandat 2383.644 kb on - strandat 2383.685 kb on + strandat 2383.941 kb on - strandat 2383.958 kb on - strandat 2384.033 kb on - strand, within yfbLat 2384.033 kb on - strand, within yfbLat 2384.033 kb on - strand, within yfbLat 2384.033 kb on - strand, within yfbLat 2384.086 kb on - strand, within yfbLat 2384.122 kb on - strand, within yfbLat 2384.122 kb on - strand, within yfbLat 2384.122 kb on - strand, within yfbLat 2384.122 kb on - strand, within yfbLat 2384.122 kb on - strand, within yfbLat 2384.122 kb on - strand, within yfbLat 2384.122 kb on - strand, within yfbLat 2384.122 kb on - strand, within yfbLat 2384.122 kb on - strand, within yfbLat 2384.122 kb on - strand, within yfbLat 2384.134 kb on - strand, within yfbLat 2384.136 kb on - strand, within yfbLat 2384.136 kb on - strand, within yfbLat 2384.191 kb on - strand, within yfbLat 2384.193 kb on - strand, within yfbLat 2384.210 kb on - strand, within yfbLat 2384.226 kb on - strand, within yfbLat 2384.226 kb on - strand, within yfbLat 2384.266 kb on - strand, within yfbLat 2384.266 kb on - strand, within yfbLat 2384.266 kb on - strand, within yfbLat 2384.273 kb on - strand, within yfbLat 2384.286 kb on - strand, within yfbLat 2384.301 kb on - strand, within yfbLat 2384.302 kb on - strand, within yfbLat 2384.302 kb on - strand, within yfbLat 2384.303 kb on - strand, within yfbLat 2384.319 kb on + strand, within yfbLat 2384.348 kb on + strand, within yfbLat 2384.353 kb on + strand, within yfbLat 2384.360 kb on - strand, within yfbLat 2384.363 kb on + strand, within yfbLat 2384.406 kb on + strand, within yfbLat 2384.408 kb on + strand, within yfbLat 2384.416 kb on + strand, within yfbLat 2384.416 kb on + strand, within yfbLat 2384.416 kb on + strand, within yfbLat 2384.416 kb on + strand, within yfbLat 2384.418 kb on + strand, within yfbLat 2384.420 kb on + strand, within yfbLat 2384.420 kb on + strand, within yfbLat 2384.435 kb on + strand, within yfbLat 2384.476 kb on + strand, within yfbLat 2384.478 kb on + strand, within yfbLat 2384.478 kb on + strand, within yfbLat 2384.502 kb on + strand, within yfbLat 2384.502 kb on + strand, within yfbLat 2384.502 kb on + strand, within yfbLat 2384.529 kb on + strand, within yfbLat 2384.529 kb on + strand, within yfbLat 2384.529 kb on + strand, within yfbLat 2384.529 kb on + strand, within yfbLat 2384.529 kb on + strand, within yfbLat 2384.578 kb on + strand, within yfbLat 2384.917 kb on - strandat 2385.135 kb on - strand, within yfbMat 2385.170 kb on - strand, within yfbMat 2385.184 kb on + strand, within yfbMat 2385.190 kb on - strand, within yfbMat 2385.202 kb on - strand, within yfbMat 2385.216 kb on + strand, within yfbMat 2385.252 kb on + strand, within yfbMat 2385.269 kb on + strand, within yfbMat 2385.269 kb on + strand, within yfbMat 2385.404 kb on + strand, within yfbMat 2385.420 kb on + strandat 2385.428 kb on + strandat 2385.441 kb on + strandat 2385.443 kb on + strandat 2385.444 kb on + strandat 2385.449 kb on + strandat 2385.456 kb on + strandat 2385.456 kb on + strandat 2385.458 kb on + strandat 2385.475 kb on + strandat 2385.476 kb on + strandat 2385.476 kb on + strandat 2385.484 kb on + strandat 2385.486 kb on + strandat 2385.553 kb on + strandat 2385.558 kb on + strandat 2385.558 kb on + strandat 2385.655 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction LB Anaerobic with Benzethonium chloride 0.000015625 mM
remove
2,382,883 - yfbK b2270 0.50 +1.2
2,382,893 - yfbK b2270 0.51 +0.9
2,382,917 - yfbK b2270 0.52 +0.3
2,382,917 - yfbK b2270 0.52 +0.2
2,382,917 - yfbK b2270 0.52 +0.9
2,382,930 - yfbK b2270 0.53 -0.5
2,382,938 - yfbK b2270 0.53 -1.7
2,382,939 + yfbK b2270 0.53 -0.4
2,382,949 + yfbK b2270 0.54 -1.4
2,382,949 + yfbK b2270 0.54 -1.0
2,382,960 - yfbK b2270 0.55 -1.4
2,382,960 - yfbK b2270 0.55 +1.0
2,382,960 - yfbK b2270 0.55 -0.5
2,382,960 - yfbK b2270 0.55 +0.5
2,382,969 + yfbK b2270 0.55 +0.4
2,382,987 + yfbK b2270 0.56 -0.4
2,382,987 + yfbK b2270 0.56 -0.2
2,382,989 + yfbK b2270 0.56 -0.3
2,382,995 - yfbK b2270 0.57 +0.7
2,382,995 - yfbK b2270 0.57 +0.3
2,382,995 - yfbK b2270 0.57 -0.3
2,383,000 + yfbK b2270 0.57 -1.7
2,383,044 - yfbK b2270 0.59 +0.6
2,383,044 - yfbK b2270 0.59 -2.2
2,383,049 - yfbK b2270 0.60 +0.4
2,383,096 + yfbK b2270 0.62 +1.6
2,383,112 - yfbK b2270 0.63 -0.3
2,383,112 - yfbK b2270 0.63 +0.4
2,383,112 - yfbK b2270 0.63 -0.8
2,383,182 + yfbK b2270 0.67 -2.2
2,383,182 + yfbK b2270 0.67 +0.5
2,383,190 + yfbK b2270 0.68 -0.4
2,383,198 + yfbK b2270 0.68 -1.1
2,383,215 + yfbK b2270 0.69 -1.5
2,383,218 - yfbK b2270 0.70 +1.6
2,383,282 + yfbK b2270 0.73 -1.0
2,383,282 + yfbK b2270 0.73 +0.6
2,383,299 - yfbK b2270 0.74 -0.4
2,383,299 - yfbK b2270 0.74 -0.4
2,383,302 + yfbK b2270 0.74 -0.4
2,383,342 + yfbK b2270 0.77 +0.9
2,383,350 + yfbK b2270 0.77 +2.2
2,383,360 - yfbK b2270 0.78 -0.4
2,383,360 - yfbK b2270 0.78 +0.1
2,383,465 - yfbK b2270 0.84 +0.9
2,383,467 - yfbK b2270 0.84 +0.0
2,383,479 - yfbK b2270 0.85 +1.6
2,383,515 + yfbK b2270 0.87 -0.7
2,383,538 + yfbK b2270 0.88 +0.1
2,383,546 + yfbK b2270 0.88 +0.4
2,383,553 - yfbK b2270 0.89 -1.0
2,383,624 + +0.6
2,383,633 + -0.4
2,383,633 + +0.6
2,383,635 + -0.4
2,383,639 - +0.6
2,383,641 + -2.0
2,383,644 - +0.6
2,383,685 + -0.4
2,383,941 - -0.4
2,383,958 - +0.6
2,384,033 - yfbL b2271 0.16 +0.6
2,384,033 - yfbL b2271 0.16 -1.4
2,384,033 - yfbL b2271 0.16 -0.4
2,384,033 - yfbL b2271 0.16 -0.4
2,384,086 - yfbL b2271 0.21 +0.6
2,384,122 - yfbL b2271 0.25 +0.6
2,384,122 - yfbL b2271 0.25 +0.6
2,384,122 - yfbL b2271 0.25 -0.4
2,384,122 - yfbL b2271 0.25 -1.0
2,384,122 - yfbL b2271 0.25 +0.6
2,384,122 - yfbL b2271 0.25 -1.0
2,384,122 - yfbL b2271 0.25 +0.6
2,384,122 - yfbL b2271 0.25 -0.4
2,384,122 - yfbL b2271 0.25 +0.6
2,384,122 - yfbL b2271 0.25 -0.4
2,384,134 - yfbL b2271 0.26 +0.6
2,384,136 - yfbL b2271 0.26 +0.6
2,384,136 - yfbL b2271 0.26 -2.4
2,384,191 - yfbL b2271 0.32 +0.6
2,384,193 - yfbL b2271 0.32 +0.6
2,384,210 - yfbL b2271 0.34 +0.6
2,384,226 - yfbL b2271 0.35 +0.6
2,384,226 - yfbL b2271 0.35 +0.6
2,384,266 - yfbL b2271 0.40 -0.4
2,384,266 - yfbL b2271 0.40 -0.4
2,384,266 - yfbL b2271 0.40 -1.6
2,384,273 - yfbL b2271 0.40 +0.6
2,384,286 - yfbL b2271 0.42 +0.0
2,384,301 - yfbL b2271 0.43 -0.4
2,384,302 - yfbL b2271 0.43 +0.6
2,384,302 - yfbL b2271 0.43 +0.3
2,384,303 - yfbL b2271 0.43 +0.6
2,384,319 + yfbL b2271 0.45 +0.6
2,384,348 + yfbL b2271 0.48 +0.6
2,384,353 + yfbL b2271 0.48 -1.4
2,384,360 - yfbL b2271 0.49 +0.6
2,384,363 + yfbL b2271 0.49 +0.6
2,384,406 + yfbL b2271 0.54 +0.6
2,384,408 + yfbL b2271 0.54 -1.0
2,384,416 + yfbL b2271 0.55 +0.0
2,384,416 + yfbL b2271 0.55 +0.6
2,384,416 + yfbL b2271 0.55 +1.2
2,384,416 + yfbL b2271 0.55 -1.0
2,384,418 + yfbL b2271 0.55 -1.4
2,384,420 + yfbL b2271 0.55 -3.5
2,384,420 + yfbL b2271 0.55 +0.4
2,384,435 + yfbL b2271 0.57 +0.6
2,384,476 + yfbL b2271 0.61 -2.0
2,384,478 + yfbL b2271 0.61 +2.2
2,384,478 + yfbL b2271 0.61 -1.4
2,384,502 + yfbL b2271 0.64 -1.0
2,384,502 + yfbL b2271 0.64 -1.0
2,384,502 + yfbL b2271 0.64 -0.4
2,384,529 + yfbL b2271 0.67 +0.6
2,384,529 + yfbL b2271 0.67 +0.6
2,384,529 + yfbL b2271 0.67 +0.6
2,384,529 + yfbL b2271 0.67 +0.6
2,384,529 + yfbL b2271 0.67 +0.6
2,384,578 + yfbL b2271 0.72 +0.6
2,384,917 - +0.6
2,385,135 - yfbM b2272 0.36 +0.6
2,385,170 - yfbM b2272 0.42 +0.6
2,385,184 + yfbM b2272 0.45 +0.6
2,385,190 - yfbM b2272 0.46 +0.6
2,385,202 - yfbM b2272 0.49 +0.6
2,385,216 + yfbM b2272 0.52 -1.4
2,385,252 + yfbM b2272 0.59 +1.2
2,385,269 + yfbM b2272 0.62 +1.0
2,385,269 + yfbM b2272 0.62 -2.0
2,385,404 + yfbM b2272 0.89 -0.8
2,385,420 + +0.6
2,385,428 + +0.1
2,385,441 + +0.2
2,385,443 + -0.9
2,385,444 + -0.4
2,385,449 + -1.0
2,385,456 + +0.3
2,385,456 + +0.5
2,385,458 + -0.4
2,385,475 + -1.2
2,385,476 + +1.3
2,385,476 + -0.3
2,385,484 + -1.4
2,385,486 + +0.6
2,385,553 + -2.0
2,385,558 + +0.6
2,385,558 + +0.6
2,385,655 + +0.6

Or see this region's nucleotide sequence