Experiment: KB with Gossypol-Acetic Acid Complex 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4597 and Psyr_4598 are separated by 45 nucleotides Psyr_4598 and Psyr_4599 overlap by 20 nucleotides Psyr_4599 and Psyr_4600 are separated by 122 nucleotides Psyr_4600 and Psyr_4601 are separated by 11 nucleotides Psyr_4601 and Psyr_4602 are separated by 272 nucleotides
Psyr_4597: Psyr_4597 - conserved hypothetical protein, at 5,457,027 to 5,457,617
_4597
Psyr_4598: Psyr_4598 - lipoprotein, putative, at 5,457,663 to 5,458,001
_4598
Psyr_4599: Psyr_4599 - conserved hypothetical protein, at 5,457,982 to 5,458,371
_4599
Psyr_4600: Psyr_4600 - Glycoside hydrolase, family 5, at 5,458,494 to 5,459,666
_4600
Psyr_4601: Psyr_4601 - hypothetical protein, at 5,459,678 to 5,459,863
_4601
Psyr_4602: Psyr_4602 - hypothetical protein, at 5,460,136 to 5,460,579
_4602
Position (kb) 5458
5459
5460 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5457.494 kb on - strand, within Psyr_4597 at 5457.494 kb on - strand, within Psyr_4597 at 5457.601 kb on - strand at 5457.601 kb on - strand at 5457.672 kb on + strand at 5457.673 kb on - strand at 5457.833 kb on - strand, within Psyr_4598 at 5457.833 kb on - strand, within Psyr_4598 at 5457.833 kb on - strand, within Psyr_4598 at 5457.863 kb on + strand, within Psyr_4598 at 5457.864 kb on - strand, within Psyr_4598 at 5458.036 kb on + strand, within Psyr_4599 at 5458.069 kb on - strand, within Psyr_4599 at 5458.295 kb on - strand, within Psyr_4599 at 5458.338 kb on + strand at 5458.339 kb on - strand at 5458.354 kb on + strand at 5458.537 kb on + strand at 5458.538 kb on - strand at 5458.538 kb on - strand at 5458.718 kb on + strand, within Psyr_4600 at 5458.747 kb on + strand, within Psyr_4600 at 5458.747 kb on + strand, within Psyr_4600 at 5458.747 kb on + strand, within Psyr_4600 at 5458.748 kb on - strand, within Psyr_4600 at 5458.748 kb on - strand, within Psyr_4600 at 5459.003 kb on + strand, within Psyr_4600 at 5459.020 kb on + strand, within Psyr_4600 at 5459.020 kb on + strand, within Psyr_4600 at 5459.020 kb on + strand, within Psyr_4600 at 5459.020 kb on + strand, within Psyr_4600 at 5459.021 kb on - strand, within Psyr_4600 at 5459.045 kb on + strand, within Psyr_4600 at 5459.045 kb on + strand, within Psyr_4600 at 5459.045 kb on + strand, within Psyr_4600 at 5459.046 kb on - strand, within Psyr_4600 at 5459.046 kb on - strand, within Psyr_4600 at 5459.046 kb on - strand, within Psyr_4600 at 5459.046 kb on - strand, within Psyr_4600 at 5459.046 kb on - strand, within Psyr_4600 at 5459.046 kb on - strand, within Psyr_4600 at 5459.046 kb on - strand, within Psyr_4600 at 5459.046 kb on - strand, within Psyr_4600 at 5459.046 kb on - strand, within Psyr_4600 at 5459.046 kb on - strand, within Psyr_4600 at 5459.046 kb on - strand, within Psyr_4600 at 5459.046 kb on - strand, within Psyr_4600 at 5459.046 kb on - strand, within Psyr_4600 at 5459.046 kb on - strand, within Psyr_4600 at 5459.046 kb on - strand, within Psyr_4600 at 5459.046 kb on - strand, within Psyr_4600 at 5459.046 kb on - strand, within Psyr_4600 at 5459.046 kb on - strand, within Psyr_4600 at 5459.046 kb on - strand, within Psyr_4600 at 5459.050 kb on + strand, within Psyr_4600 at 5459.050 kb on + strand, within Psyr_4600 at 5459.050 kb on + strand, within Psyr_4600 at 5459.050 kb on + strand, within Psyr_4600 at 5459.051 kb on - strand, within Psyr_4600 at 5459.051 kb on - strand, within Psyr_4600 at 5459.051 kb on - strand, within Psyr_4600 at 5459.051 kb on - strand, within Psyr_4600 at 5459.051 kb on - strand, within Psyr_4600 at 5459.320 kb on + strand, within Psyr_4600 at 5459.320 kb on + strand, within Psyr_4600 at 5459.320 kb on + strand, within Psyr_4600 at 5459.320 kb on + strand, within Psyr_4600 at 5459.320 kb on + strand, within Psyr_4600 at 5459.321 kb on - strand, within Psyr_4600 at 5459.321 kb on - strand, within Psyr_4600 at 5459.321 kb on - strand, within Psyr_4600 at 5459.321 kb on - strand, within Psyr_4600 at 5459.321 kb on - strand, within Psyr_4600 at 5459.321 kb on - strand, within Psyr_4600 at 5459.321 kb on - strand, within Psyr_4600 at 5459.552 kb on - strand at 5459.552 kb on - strand at 5459.612 kb on + strand at 5459.613 kb on - strand at 5459.616 kb on + strand at 5459.616 kb on + strand at 5459.617 kb on - strand at 5459.657 kb on + strand at 5459.658 kb on - strand at 5459.673 kb on + strand at 5459.673 kb on + strand at 5459.674 kb on - strand at 5459.674 kb on - strand at 5459.679 kb on + strand at 5459.680 kb on - strand at 5459.713 kb on + strand, within Psyr_4601 at 5459.713 kb on + strand, within Psyr_4601 at 5459.713 kb on + strand, within Psyr_4601 at 5459.714 kb on - strand, within Psyr_4601 at 5459.714 kb on - strand, within Psyr_4601 at 5459.735 kb on + strand, within Psyr_4601 at 5459.805 kb on + strand, within Psyr_4601 at 5459.805 kb on + strand, within Psyr_4601 at 5459.805 kb on + strand, within Psyr_4601 at 5459.805 kb on + strand, within Psyr_4601 at 5459.806 kb on - strand, within Psyr_4601 at 5459.806 kb on - strand, within Psyr_4601 at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.865 kb on + strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5459.866 kb on - strand at 5460.243 kb on - strand, within Psyr_4602 at 5460.311 kb on + strand, within Psyr_4602 at 5460.311 kb on + strand, within Psyr_4602 at 5460.312 kb on - strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.403 kb on + strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.404 kb on - strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.405 kb on + strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.406 kb on - strand, within Psyr_4602 at 5460.407 kb on + strand, within Psyr_4602 at 5460.407 kb on + strand, within Psyr_4602 at 5460.407 kb on + strand, within Psyr_4602 at 5460.407 kb on + strand, within Psyr_4602 at 5460.407 kb on + strand, within Psyr_4602 at 5460.408 kb on - strand, within Psyr_4602 at 5460.408 kb on - strand, within Psyr_4602 at 5460.408 kb on - strand, within Psyr_4602 at 5460.408 kb on - strand, within Psyr_4602 at 5460.468 kb on - strand, within Psyr_4602 at 5460.468 kb on - strand, within Psyr_4602 at 5460.565 kb on + strand at 5460.565 kb on + strand at 5460.565 kb on + strand at 5460.565 kb on + strand at 5460.565 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Gossypol-Acetic Acid Complex 10 mM remove 5,457,494 - Psyr_4597 0.79 +0.6 5,457,494 - Psyr_4597 0.79 +0.3 5,457,601 - +0.3 5,457,601 - -0.0 5,457,672 + +0.0 5,457,673 - +1.6 5,457,833 - Psyr_4598 0.50 +0.2 5,457,833 - Psyr_4598 0.50 +1.2 5,457,833 - Psyr_4598 0.50 -1.1 5,457,863 + Psyr_4598 0.59 +0.1 5,457,864 - Psyr_4598 0.59 -0.6 5,458,036 + Psyr_4599 0.14 -0.3 5,458,069 - Psyr_4599 0.22 +1.6 5,458,295 - Psyr_4599 0.80 -1.3 5,458,338 + +1.1 5,458,339 - -2.0 5,458,354 + -0.7 5,458,537 + +1.1 5,458,538 - +0.5 5,458,538 - -0.9 5,458,718 + Psyr_4600 0.19 +0.3 5,458,747 + Psyr_4600 0.22 -2.9 5,458,747 + Psyr_4600 0.22 +0.7 5,458,747 + Psyr_4600 0.22 -0.4 5,458,748 - Psyr_4600 0.22 +0.9 5,458,748 - Psyr_4600 0.22 +1.5 5,459,003 + Psyr_4600 0.43 -0.1 5,459,020 + Psyr_4600 0.45 -0.8 5,459,020 + Psyr_4600 0.45 +0.4 5,459,020 + Psyr_4600 0.45 +0.4 5,459,020 + Psyr_4600 0.45 +0.0 5,459,021 - Psyr_4600 0.45 -0.9 5,459,045 + Psyr_4600 0.47 +1.2 5,459,045 + Psyr_4600 0.47 -0.1 5,459,045 + Psyr_4600 0.47 +0.4 5,459,046 - Psyr_4600 0.47 +0.2 5,459,046 - Psyr_4600 0.47 +2.2 5,459,046 - Psyr_4600 0.47 +0.9 5,459,046 - Psyr_4600 0.47 -0.5 5,459,046 - Psyr_4600 0.47 +0.2 5,459,046 - Psyr_4600 0.47 +0.9 5,459,046 - Psyr_4600 0.47 +0.1 5,459,046 - Psyr_4600 0.47 +1.0 5,459,046 - Psyr_4600 0.47 +3.2 5,459,046 - Psyr_4600 0.47 +0.1 5,459,046 - Psyr_4600 0.47 -1.2 5,459,046 - Psyr_4600 0.47 +1.2 5,459,046 - Psyr_4600 0.47 -1.6 5,459,046 - Psyr_4600 0.47 +0.8 5,459,046 - Psyr_4600 0.47 +0.3 5,459,046 - Psyr_4600 0.47 +0.4 5,459,046 - Psyr_4600 0.47 -0.2 5,459,046 - Psyr_4600 0.47 -0.8 5,459,046 - Psyr_4600 0.47 +0.5 5,459,050 + Psyr_4600 0.47 +1.1 5,459,050 + Psyr_4600 0.47 -0.3 5,459,050 + Psyr_4600 0.47 +1.1 5,459,050 + Psyr_4600 0.47 +0.1 5,459,051 - Psyr_4600 0.47 -0.7 5,459,051 - Psyr_4600 0.47 -1.2 5,459,051 - Psyr_4600 0.47 +0.1 5,459,051 - Psyr_4600 0.47 +1.8 5,459,051 - Psyr_4600 0.47 +1.6 5,459,320 + Psyr_4600 0.70 +0.8 5,459,320 + Psyr_4600 0.70 +0.8 5,459,320 + Psyr_4600 0.70 -1.0 5,459,320 + Psyr_4600 0.70 -0.3 5,459,320 + Psyr_4600 0.70 -0.3 5,459,321 - Psyr_4600 0.71 +0.7 5,459,321 - Psyr_4600 0.71 -1.1 5,459,321 - Psyr_4600 0.71 +1.4 5,459,321 - Psyr_4600 0.71 +0.0 5,459,321 - Psyr_4600 0.71 -0.7 5,459,321 - Psyr_4600 0.71 +2.0 5,459,321 - Psyr_4600 0.71 -0.1 5,459,552 - -0.8 5,459,552 - -0.5 5,459,612 + +0.6 5,459,613 - -1.1 5,459,616 + +0.5 5,459,616 + -0.2 5,459,617 - -1.4 5,459,657 + -0.6 5,459,658 - +0.1 5,459,673 + -0.9 5,459,673 + -0.4 5,459,674 - -0.3 5,459,674 - -0.5 5,459,679 + +1.0 5,459,680 - -0.2 5,459,713 + Psyr_4601 0.19 -0.4 5,459,713 + Psyr_4601 0.19 -0.2 5,459,713 + Psyr_4601 0.19 +0.1 5,459,714 - Psyr_4601 0.19 +2.8 5,459,714 - Psyr_4601 0.19 +0.2 5,459,735 + Psyr_4601 0.31 +0.5 5,459,805 + Psyr_4601 0.68 -0.4 5,459,805 + Psyr_4601 0.68 -1.3 5,459,805 + Psyr_4601 0.68 -0.0 5,459,805 + Psyr_4601 0.68 +0.2 5,459,806 - Psyr_4601 0.69 -0.1 5,459,806 - Psyr_4601 0.69 -1.6 5,459,865 + +0.3 5,459,865 + +0.5 5,459,865 + +0.9 5,459,865 + -2.3 5,459,865 + -0.5 5,459,865 + +0.3 5,459,865 + +1.2 5,459,865 + +1.1 5,459,865 + +1.4 5,459,865 + -0.2 5,459,865 + -0.3 5,459,865 + +0.1 5,459,866 - -0.8 5,459,866 - -0.7 5,459,866 - -0.0 5,459,866 - -0.4 5,459,866 - -0.2 5,459,866 - -0.4 5,459,866 - -0.3 5,459,866 - -0.3 5,459,866 - -1.0 5,460,243 - Psyr_4602 0.24 +0.3 5,460,311 + Psyr_4602 0.39 +0.1 5,460,311 + Psyr_4602 0.39 -0.8 5,460,312 - Psyr_4602 0.40 -0.2 5,460,403 + Psyr_4602 0.60 -0.7 5,460,403 + Psyr_4602 0.60 -0.3 5,460,403 + Psyr_4602 0.60 -0.2 5,460,403 + Psyr_4602 0.60 +0.2 5,460,403 + Psyr_4602 0.60 +1.2 5,460,403 + Psyr_4602 0.60 -0.5 5,460,403 + Psyr_4602 0.60 -0.2 5,460,403 + Psyr_4602 0.60 +0.3 5,460,403 + Psyr_4602 0.60 -1.1 5,460,403 + Psyr_4602 0.60 +0.0 5,460,403 + Psyr_4602 0.60 -1.0 5,460,403 + Psyr_4602 0.60 -0.9 5,460,403 + Psyr_4602 0.60 -1.0 5,460,403 + Psyr_4602 0.60 +0.0 5,460,403 + Psyr_4602 0.60 -0.8 5,460,403 + Psyr_4602 0.60 -1.0 5,460,403 + Psyr_4602 0.60 -0.2 5,460,403 + Psyr_4602 0.60 -0.7 5,460,404 - Psyr_4602 0.60 -0.6 5,460,404 - Psyr_4602 0.60 +0.6 5,460,404 - Psyr_4602 0.60 +0.9 5,460,404 - Psyr_4602 0.60 +0.6 5,460,404 - Psyr_4602 0.60 -0.9 5,460,404 - Psyr_4602 0.60 -0.9 5,460,404 - Psyr_4602 0.60 +0.6 5,460,404 - Psyr_4602 0.60 -0.2 5,460,404 - Psyr_4602 0.60 +0.1 5,460,404 - Psyr_4602 0.60 +0.5 5,460,404 - Psyr_4602 0.60 +0.1 5,460,404 - Psyr_4602 0.60 +0.0 5,460,404 - Psyr_4602 0.60 +0.1 5,460,404 - Psyr_4602 0.60 -1.4 5,460,404 - Psyr_4602 0.60 -0.7 5,460,405 + Psyr_4602 0.61 +1.5 5,460,405 + Psyr_4602 0.61 +0.9 5,460,405 + Psyr_4602 0.61 +0.1 5,460,405 + Psyr_4602 0.61 +0.4 5,460,405 + Psyr_4602 0.61 -0.3 5,460,405 + Psyr_4602 0.61 +0.7 5,460,405 + Psyr_4602 0.61 +0.2 5,460,405 + Psyr_4602 0.61 +0.1 5,460,405 + Psyr_4602 0.61 -0.6 5,460,405 + Psyr_4602 0.61 +1.6 5,460,405 + Psyr_4602 0.61 -0.9 5,460,405 + Psyr_4602 0.61 -0.1 5,460,406 - Psyr_4602 0.61 +0.7 5,460,406 - Psyr_4602 0.61 +0.1 5,460,406 - Psyr_4602 0.61 +0.6 5,460,406 - Psyr_4602 0.61 +0.8 5,460,406 - Psyr_4602 0.61 +1.3 5,460,406 - Psyr_4602 0.61 -0.7 5,460,406 - Psyr_4602 0.61 -0.1 5,460,406 - Psyr_4602 0.61 -0.2 5,460,406 - Psyr_4602 0.61 -0.6 5,460,406 - Psyr_4602 0.61 -0.5 5,460,406 - Psyr_4602 0.61 +0.8 5,460,406 - Psyr_4602 0.61 -0.6 5,460,407 + Psyr_4602 0.61 +0.5 5,460,407 + Psyr_4602 0.61 +1.2 5,460,407 + Psyr_4602 0.61 +0.5 5,460,407 + Psyr_4602 0.61 +0.0 5,460,407 + Psyr_4602 0.61 -0.0 5,460,408 - Psyr_4602 0.61 +0.9 5,460,408 - Psyr_4602 0.61 -0.4 5,460,408 - Psyr_4602 0.61 -0.4 5,460,408 - Psyr_4602 0.61 +0.4 5,460,468 - Psyr_4602 0.75 -1.7 5,460,468 - Psyr_4602 0.75 -1.0 5,460,565 + -0.3 5,460,565 + +0.7 5,460,565 + -1.0 5,460,565 + -0.4 5,460,565 + -1.3
Or see this region's nucleotide sequence