Experiment: KB with Gossypol-Acetic Acid Complex 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3464 and Psyr_3465 are separated by 83 nucleotides Psyr_3465 and Psyr_3466 are separated by 72 nucleotides Psyr_3466 and Psyr_3467 are separated by 328 nucleotides
Psyr_3464: Psyr_3464 - Flagellar hook-associated protein 2, N-terminal:Flagellar hook-associated 2, C-terminal:Flagellin hook IN, at 4,127,689 to 4,129,140
_3464
Psyr_3465: Psyr_3465 - Flagellar protein FlaG protein, at 4,129,224 to 4,129,616
_3465
Psyr_3466: Psyr_3466 - Flagellin, C-terminal:Flagellin, N-terminal, at 4,129,689 to 4,130,537
_3466
Psyr_3467: Psyr_3467 - 3-oxoacyl-[acyl-carrier protein] synthase, at 4,130,866 to 4,131,795
_3467
Position (kb) 4129
4130
4131 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4128.719 kb on + strand, within Psyr_3464 at 4128.719 kb on + strand, within Psyr_3464 at 4128.720 kb on - strand, within Psyr_3464 at 4128.720 kb on - strand, within Psyr_3464 at 4128.720 kb on - strand, within Psyr_3464 at 4128.720 kb on - strand, within Psyr_3464 at 4128.720 kb on - strand, within Psyr_3464 at 4128.763 kb on - strand, within Psyr_3464 at 4128.763 kb on - strand, within Psyr_3464 at 4128.784 kb on + strand, within Psyr_3464 at 4128.840 kb on - strand, within Psyr_3464 at 4128.891 kb on + strand, within Psyr_3464 at 4128.891 kb on + strand, within Psyr_3464 at 4128.891 kb on + strand, within Psyr_3464 at 4128.892 kb on - strand, within Psyr_3464 at 4129.110 kb on + strand at 4129.111 kb on - strand at 4129.119 kb on + strand at 4129.119 kb on + strand at 4129.120 kb on - strand at 4129.120 kb on - strand at 4129.120 kb on - strand at 4129.125 kb on + strand at 4129.126 kb on - strand at 4129.126 kb on - strand at 4129.126 kb on - strand at 4129.184 kb on + strand at 4129.185 kb on - strand at 4129.308 kb on + strand, within Psyr_3465 at 4129.309 kb on - strand, within Psyr_3465 at 4129.309 kb on - strand, within Psyr_3465 at 4129.311 kb on + strand, within Psyr_3465 at 4129.311 kb on + strand, within Psyr_3465 at 4129.311 kb on + strand, within Psyr_3465 at 4129.312 kb on - strand, within Psyr_3465 at 4129.312 kb on - strand, within Psyr_3465 at 4129.312 kb on - strand, within Psyr_3465 at 4129.312 kb on - strand, within Psyr_3465 at 4129.439 kb on + strand, within Psyr_3465 at 4129.439 kb on + strand, within Psyr_3465 at 4129.439 kb on + strand, within Psyr_3465 at 4129.586 kb on - strand at 4129.657 kb on + strand at 4129.657 kb on + strand at 4129.657 kb on + strand at 4129.657 kb on + strand at 4129.658 kb on - strand at 4129.658 kb on - strand at 4129.658 kb on - strand at 4129.658 kb on - strand at 4129.690 kb on + strand at 4129.691 kb on - strand at 4130.150 kb on + strand, within Psyr_3466 at 4130.151 kb on - strand, within Psyr_3466 at 4130.151 kb on - strand, within Psyr_3466 at 4130.265 kb on - strand, within Psyr_3466 at 4130.324 kb on + strand, within Psyr_3466 at 4130.324 kb on + strand, within Psyr_3466 at 4130.512 kb on - strand at 4130.512 kb on - strand at 4130.512 kb on - strand at 4130.512 kb on - strand at 4130.523 kb on + strand at 4130.524 kb on - strand at 4130.562 kb on - strand at 4130.564 kb on + strand at 4130.564 kb on + strand at 4130.564 kb on + strand at 4130.565 kb on - strand at 4130.565 kb on - strand at 4130.565 kb on - strand at 4130.565 kb on - strand at 4130.565 kb on - strand at 4130.565 kb on - strand at 4130.602 kb on - strand at 4130.617 kb on + strand at 4130.617 kb on + strand at 4130.617 kb on + strand at 4130.617 kb on + strand at 4130.617 kb on + strand at 4130.618 kb on - strand at 4130.618 kb on - strand at 4130.797 kb on + strand at 4130.798 kb on - strand at 4130.798 kb on - strand at 4130.798 kb on - strand at 4130.809 kb on + strand at 4130.810 kb on - strand at 4130.810 kb on - strand at 4130.880 kb on + strand at 4130.881 kb on - strand at 4131.463 kb on + strand, within Psyr_3467 at 4131.464 kb on - strand, within Psyr_3467
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Gossypol-Acetic Acid Complex 10 mM remove 4,128,719 + Psyr_3464 0.71 -0.8 4,128,719 + Psyr_3464 0.71 -1.3 4,128,720 - Psyr_3464 0.71 -0.7 4,128,720 - Psyr_3464 0.71 -0.3 4,128,720 - Psyr_3464 0.71 +0.3 4,128,720 - Psyr_3464 0.71 -2.9 4,128,720 - Psyr_3464 0.71 +1.7 4,128,763 - Psyr_3464 0.74 +0.3 4,128,763 - Psyr_3464 0.74 -0.8 4,128,784 + Psyr_3464 0.75 -0.7 4,128,840 - Psyr_3464 0.79 -0.9 4,128,891 + Psyr_3464 0.83 -0.1 4,128,891 + Psyr_3464 0.83 -0.1 4,128,891 + Psyr_3464 0.83 +0.8 4,128,892 - Psyr_3464 0.83 +0.2 4,129,110 + +0.5 4,129,111 - -1.1 4,129,119 + +0.6 4,129,119 + +0.1 4,129,120 - +0.1 4,129,120 - -0.2 4,129,120 - +0.2 4,129,125 + -0.7 4,129,126 - -0.9 4,129,126 - +1.6 4,129,126 - +3.4 4,129,184 + +0.1 4,129,185 - -0.6 4,129,308 + Psyr_3465 0.21 +0.2 4,129,309 - Psyr_3465 0.22 +0.5 4,129,309 - Psyr_3465 0.22 +1.2 4,129,311 + Psyr_3465 0.22 -0.4 4,129,311 + Psyr_3465 0.22 -0.0 4,129,311 + Psyr_3465 0.22 -0.9 4,129,312 - Psyr_3465 0.22 -0.5 4,129,312 - Psyr_3465 0.22 -0.8 4,129,312 - Psyr_3465 0.22 -0.9 4,129,312 - Psyr_3465 0.22 +0.9 4,129,439 + Psyr_3465 0.55 +0.1 4,129,439 + Psyr_3465 0.55 -2.3 4,129,439 + Psyr_3465 0.55 +0.1 4,129,586 - +0.2 4,129,657 + +0.6 4,129,657 + -0.4 4,129,657 + -1.6 4,129,657 + +0.4 4,129,658 - +0.1 4,129,658 - +0.6 4,129,658 - +0.3 4,129,658 - -0.6 4,129,690 + +0.4 4,129,691 - -0.7 4,130,150 + Psyr_3466 0.54 -0.9 4,130,151 - Psyr_3466 0.54 -1.0 4,130,151 - Psyr_3466 0.54 +0.4 4,130,265 - Psyr_3466 0.68 -1.3 4,130,324 + Psyr_3466 0.75 -0.5 4,130,324 + Psyr_3466 0.75 -0.4 4,130,512 - +0.4 4,130,512 - +1.1 4,130,512 - -0.3 4,130,512 - -0.8 4,130,523 + -0.5 4,130,524 - +0.2 4,130,562 - +1.0 4,130,564 + +0.7 4,130,564 + +1.8 4,130,564 + +0.6 4,130,565 - -0.2 4,130,565 - -2.1 4,130,565 - -0.6 4,130,565 - +0.1 4,130,565 - -0.2 4,130,565 - +0.7 4,130,602 - +0.4 4,130,617 + -0.8 4,130,617 + -0.8 4,130,617 + -0.3 4,130,617 + -1.3 4,130,617 + -1.0 4,130,618 - +0.4 4,130,618 - +0.1 4,130,797 + -1.0 4,130,798 - -2.4 4,130,798 - -0.5 4,130,798 - +1.1 4,130,809 + -0.4 4,130,810 - -0.9 4,130,810 - -1.2 4,130,880 + -0.9 4,130,881 - -0.9 4,131,463 + Psyr_3467 0.64 -0.3 4,131,464 - Psyr_3467 0.64 -2.4
Or see this region's nucleotide sequence