Experiment: KB with Gossypol-Acetic Acid Complex 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3348 and Psyr_3349 are separated by 141 nucleotides Psyr_3349 and Psyr_3350 are separated by 28 nucleotides
Psyr_3348: Psyr_3348 - Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer, at 4,003,979 to 4,005,607
_3348
Psyr_3349: Psyr_3349 - conserved hypothetical protein, at 4,005,749 to 4,006,177
_3349
Psyr_3350: Psyr_3350 - Allergen V5/Tpx-1 related protein, at 4,006,206 to 4,007,087
_3350
Position (kb) 4005
4006
4007 Strain fitness (log2 ratio) -2
-1
0
1 at 4005.063 kb on + strand, within Psyr_3348 at 4005.063 kb on + strand, within Psyr_3348 at 4005.097 kb on + strand, within Psyr_3348 at 4005.097 kb on + strand, within Psyr_3348 at 4005.098 kb on - strand, within Psyr_3348 at 4005.605 kb on + strand at 4005.745 kb on - strand at 4005.844 kb on - strand, within Psyr_3349 at 4005.879 kb on + strand, within Psyr_3349 at 4005.879 kb on + strand, within Psyr_3349 at 4005.880 kb on - strand, within Psyr_3349 at 4005.880 kb on - strand, within Psyr_3349 at 4005.880 kb on - strand, within Psyr_3349 at 4005.917 kb on + strand, within Psyr_3349 at 4005.917 kb on + strand, within Psyr_3349 at 4005.917 kb on + strand, within Psyr_3349 at 4005.917 kb on + strand, within Psyr_3349 at 4005.917 kb on + strand, within Psyr_3349 at 4005.917 kb on + strand, within Psyr_3349 at 4005.917 kb on + strand, within Psyr_3349 at 4005.917 kb on + strand, within Psyr_3349 at 4005.918 kb on - strand, within Psyr_3349 at 4005.918 kb on - strand, within Psyr_3349 at 4005.918 kb on - strand, within Psyr_3349 at 4005.918 kb on - strand, within Psyr_3349 at 4005.918 kb on - strand, within Psyr_3349 at 4005.918 kb on - strand, within Psyr_3349 at 4005.918 kb on - strand, within Psyr_3349 at 4005.937 kb on + strand, within Psyr_3349 at 4005.937 kb on + strand, within Psyr_3349 at 4006.405 kb on + strand, within Psyr_3350 at 4006.949 kb on - strand, within Psyr_3350 at 4007.071 kb on + strand at 4007.071 kb on + strand at 4007.117 kb on - strand at 4007.157 kb on + strand at 4007.174 kb on + strand at 4007.175 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Gossypol-Acetic Acid Complex 10 mM remove 4,005,063 + Psyr_3348 0.67 +0.3 4,005,063 + Psyr_3348 0.67 -0.9 4,005,097 + Psyr_3348 0.69 +0.6 4,005,097 + Psyr_3348 0.69 -0.2 4,005,098 - Psyr_3348 0.69 -0.6 4,005,605 + -0.9 4,005,745 - +0.6 4,005,844 - Psyr_3349 0.22 -0.1 4,005,879 + Psyr_3349 0.30 -2.0 4,005,879 + Psyr_3349 0.30 -0.6 4,005,880 - Psyr_3349 0.31 +0.3 4,005,880 - Psyr_3349 0.31 +1.4 4,005,880 - Psyr_3349 0.31 +0.1 4,005,917 + Psyr_3349 0.39 -0.7 4,005,917 + Psyr_3349 0.39 -1.2 4,005,917 + Psyr_3349 0.39 +0.2 4,005,917 + Psyr_3349 0.39 -0.3 4,005,917 + Psyr_3349 0.39 -0.2 4,005,917 + Psyr_3349 0.39 -0.2 4,005,917 + Psyr_3349 0.39 -1.0 4,005,917 + Psyr_3349 0.39 -0.2 4,005,918 - Psyr_3349 0.39 -0.2 4,005,918 - Psyr_3349 0.39 +1.1 4,005,918 - Psyr_3349 0.39 +0.3 4,005,918 - Psyr_3349 0.39 -0.3 4,005,918 - Psyr_3349 0.39 +0.1 4,005,918 - Psyr_3349 0.39 +1.1 4,005,918 - Psyr_3349 0.39 +0.3 4,005,937 + Psyr_3349 0.44 +0.1 4,005,937 + Psyr_3349 0.44 -0.2 4,006,405 + Psyr_3350 0.23 +0.7 4,006,949 - Psyr_3350 0.84 +0.7 4,007,071 + -0.2 4,007,071 + +0.6 4,007,117 - +0.7 4,007,157 + -0.7 4,007,174 + +0.9 4,007,175 - +0.3
Or see this region's nucleotide sequence