Experiment: KB with Gossypol-Acetic Acid Complex 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_1084 and Psyr_1085 are separated by 583 nucleotides Psyr_1085 and Psyr_1086 are separated by 156 nucleotides
Psyr_1084: Psyr_1084 - Histone-like bacterial DNA-binding protein, at 1,225,706 to 1,225,987
_1084
Psyr_1085: Psyr_1085 - 23S rRNA m(6)A-1618 methyltransferase, at 1,226,571 to 1,227,557
_1085
Psyr_1086: Psyr_1086 - valyl-tRNA synthetase, at 1,227,714 to 1,230,560
_1086
Position (kb)
1226
1227
1228 Strain fitness (log2 ratio)
-1
0
1
2 at 1225.589 kb on + strand at 1225.593 kb on + strand at 1225.593 kb on + strand at 1225.593 kb on + strand at 1225.620 kb on + strand at 1225.715 kb on - strand at 1225.715 kb on - strand at 1225.717 kb on + strand at 1225.718 kb on - strand at 1225.778 kb on - strand, within Psyr_1084 at 1225.939 kb on + strand, within Psyr_1084 at 1225.985 kb on + strand at 1225.985 kb on + strand at 1225.985 kb on + strand at 1225.985 kb on + strand at 1225.985 kb on + strand at 1225.985 kb on + strand at 1225.985 kb on + strand at 1225.985 kb on + strand at 1225.985 kb on + strand at 1225.986 kb on - strand at 1225.986 kb on - strand at 1225.986 kb on - strand at 1225.986 kb on - strand at 1225.986 kb on - strand at 1225.986 kb on - strand at 1225.986 kb on - strand at 1225.986 kb on - strand at 1225.986 kb on - strand at 1225.986 kb on - strand at 1225.986 kb on - strand at 1226.242 kb on + strand at 1226.403 kb on - strand at 1226.537 kb on - strand at 1226.653 kb on - strand at 1227.115 kb on + strand, within Psyr_1085 at 1227.115 kb on + strand, within Psyr_1085 at 1227.116 kb on - strand, within Psyr_1085 at 1227.116 kb on - strand, within Psyr_1085 at 1227.116 kb on - strand, within Psyr_1085 at 1227.139 kb on + strand, within Psyr_1085 at 1227.139 kb on + strand, within Psyr_1085 at 1227.244 kb on + strand, within Psyr_1085 at 1227.310 kb on + strand, within Psyr_1085 at 1227.595 kb on + strand at 1227.648 kb on + strand at 1227.649 kb on - strand at 1227.649 kb on - strand at 1227.657 kb on - strand at 1227.715 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Gossypol-Acetic Acid Complex 10 mM remove 1,225,589 + +0.0 1,225,593 + +0.6 1,225,593 + -1.1 1,225,593 + +2.4 1,225,620 + +0.1 1,225,715 - +0.1 1,225,715 - -0.1 1,225,717 + -1.6 1,225,718 - -1.4 1,225,778 - Psyr_1084 0.26 +0.1 1,225,939 + Psyr_1084 0.83 +1.1 1,225,985 + +2.5 1,225,985 + -0.1 1,225,985 + -0.3 1,225,985 + -0.3 1,225,985 + -0.6 1,225,985 + -1.4 1,225,985 + +0.6 1,225,985 + +0.3 1,225,985 + +0.7 1,225,986 - -0.4 1,225,986 - -0.7 1,225,986 - -1.6 1,225,986 - -0.2 1,225,986 - +0.2 1,225,986 - -0.1 1,225,986 - -0.3 1,225,986 - -0.5 1,225,986 - -0.3 1,225,986 - -0.5 1,225,986 - -0.4 1,226,242 + +0.8 1,226,403 - +0.3 1,226,537 - +0.3 1,226,653 - +0.7 1,227,115 + Psyr_1085 0.55 +0.3 1,227,115 + Psyr_1085 0.55 -0.0 1,227,116 - Psyr_1085 0.55 -0.9 1,227,116 - Psyr_1085 0.55 +0.5 1,227,116 - Psyr_1085 0.55 +0.8 1,227,139 + Psyr_1085 0.58 +1.0 1,227,139 + Psyr_1085 0.58 +0.4 1,227,244 + Psyr_1085 0.68 -0.2 1,227,310 + Psyr_1085 0.75 -0.6 1,227,595 + -0.3 1,227,648 + -0.5 1,227,649 - +0.6 1,227,649 - +0.2 1,227,657 - -0.3 1,227,715 + -0.1
Or see this region's nucleotide sequence