Experiment: KB with Gossypol-Acetic Acid Complex 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0087 and Psyr_0088 are separated by 120 nucleotides Psyr_0088 and Psyr_0089 are separated by 750 nucleotides
Psyr_0087: Psyr_0087 - Fatty acid desaturase, at 93,880 to 95,064
_0087
Psyr_0088: Psyr_0088 - PAS:GGDEF, at 95,185 to 96,192
_0088
Psyr_0089: Psyr_0089 - Response regulator receiver, at 96,943 to 98,331
_0089
Position (kb) 95
96
97 Strain fitness (log2 ratio) -2
-1
0
1
2 at 94.222 kb on - strand, within Psyr_0087 at 94.222 kb on - strand, within Psyr_0087 at 94.225 kb on + strand, within Psyr_0087 at 94.225 kb on + strand, within Psyr_0087 at 94.226 kb on - strand, within Psyr_0087 at 94.267 kb on + strand, within Psyr_0087 at 94.268 kb on - strand, within Psyr_0087 at 94.513 kb on + strand, within Psyr_0087 at 94.514 kb on - strand, within Psyr_0087 at 94.624 kb on - strand, within Psyr_0087 at 94.624 kb on - strand, within Psyr_0087 at 94.998 kb on + strand at 95.039 kb on - strand at 95.110 kb on + strand at 95.194 kb on - strand at 95.267 kb on + strand at 95.392 kb on + strand, within Psyr_0088 at 95.392 kb on + strand, within Psyr_0088 at 95.392 kb on + strand, within Psyr_0088 at 95.392 kb on + strand, within Psyr_0088 at 95.392 kb on + strand, within Psyr_0088 at 95.392 kb on + strand, within Psyr_0088 at 95.392 kb on + strand, within Psyr_0088 at 95.392 kb on + strand, within Psyr_0088 at 95.393 kb on - strand, within Psyr_0088 at 95.393 kb on - strand, within Psyr_0088 at 95.393 kb on - strand, within Psyr_0088 at 95.393 kb on - strand, within Psyr_0088 at 95.393 kb on - strand, within Psyr_0088 at 95.393 kb on - strand, within Psyr_0088 at 95.393 kb on - strand, within Psyr_0088 at 95.393 kb on - strand, within Psyr_0088 at 95.393 kb on - strand, within Psyr_0088 at 95.393 kb on - strand, within Psyr_0088 at 95.393 kb on - strand, within Psyr_0088 at 95.393 kb on - strand, within Psyr_0088 at 95.393 kb on - strand, within Psyr_0088 at 95.393 kb on - strand, within Psyr_0088 at 95.408 kb on - strand, within Psyr_0088 at 95.452 kb on + strand, within Psyr_0088 at 95.452 kb on + strand, within Psyr_0088 at 95.453 kb on - strand, within Psyr_0088 at 95.453 kb on - strand, within Psyr_0088 at 95.453 kb on - strand, within Psyr_0088 at 95.494 kb on + strand, within Psyr_0088 at 95.494 kb on + strand, within Psyr_0088 at 95.494 kb on + strand, within Psyr_0088 at 95.851 kb on + strand, within Psyr_0088 at 95.851 kb on + strand, within Psyr_0088 at 95.851 kb on + strand, within Psyr_0088 at 95.851 kb on + strand, within Psyr_0088 at 95.852 kb on - strand, within Psyr_0088 at 95.852 kb on - strand, within Psyr_0088 at 95.852 kb on - strand, within Psyr_0088 at 95.852 kb on - strand, within Psyr_0088 at 95.852 kb on - strand, within Psyr_0088 at 95.852 kb on - strand, within Psyr_0088 at 96.148 kb on + strand at 96.148 kb on + strand at 96.148 kb on + strand at 96.148 kb on + strand at 96.148 kb on + strand at 96.148 kb on + strand at 96.149 kb on - strand at 96.149 kb on - strand at 96.149 kb on - strand at 96.209 kb on + strand at 96.209 kb on + strand at 96.209 kb on + strand at 96.209 kb on + strand at 96.210 kb on - strand at 96.210 kb on - strand at 96.257 kb on + strand at 96.331 kb on - strand at 96.331 kb on - strand at 96.333 kb on - strand at 96.333 kb on - strand at 96.333 kb on - strand at 96.333 kb on - strand at 96.333 kb on - strand at 96.333 kb on - strand at 96.333 kb on - strand at 96.333 kb on - strand at 96.333 kb on - strand at 96.333 kb on - strand at 96.333 kb on - strand at 96.333 kb on - strand at 96.333 kb on - strand at 96.333 kb on - strand at 96.357 kb on + strand at 96.357 kb on + strand at 96.438 kb on + strand at 96.440 kb on + strand at 96.440 kb on + strand at 96.441 kb on - strand at 96.441 kb on - strand at 96.441 kb on - strand at 96.441 kb on - strand at 96.465 kb on + strand at 96.548 kb on + strand at 96.548 kb on + strand at 96.548 kb on + strand at 96.548 kb on + strand at 96.595 kb on + strand at 96.595 kb on + strand at 96.595 kb on + strand at 96.596 kb on - strand at 96.596 kb on - strand at 96.596 kb on - strand at 96.625 kb on + strand at 96.625 kb on + strand at 96.625 kb on + strand at 96.655 kb on - strand at 96.681 kb on + strand at 96.703 kb on + strand at 96.704 kb on - strand at 96.733 kb on + strand at 96.763 kb on - strand at 96.764 kb on + strand at 96.765 kb on - strand at 96.789 kb on + strand at 96.789 kb on + strand at 96.790 kb on - strand at 96.790 kb on - strand at 96.790 kb on - strand at 96.842 kb on - strand at 96.897 kb on + strand at 96.905 kb on + strand at 96.912 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Gossypol-Acetic Acid Complex 10 mM remove 94,222 - Psyr_0087 0.29 -0.3 94,222 - Psyr_0087 0.29 +0.1 94,225 + Psyr_0087 0.29 -1.7 94,225 + Psyr_0087 0.29 +0.5 94,226 - Psyr_0087 0.29 -0.3 94,267 + Psyr_0087 0.33 -0.3 94,268 - Psyr_0087 0.33 -0.2 94,513 + Psyr_0087 0.53 +0.3 94,514 - Psyr_0087 0.54 +0.3 94,624 - Psyr_0087 0.63 +0.6 94,624 - Psyr_0087 0.63 -0.5 94,998 + -0.9 95,039 - -0.6 95,110 + -0.0 95,194 - -1.0 95,267 + +0.9 95,392 + Psyr_0088 0.21 +0.3 95,392 + Psyr_0088 0.21 -0.1 95,392 + Psyr_0088 0.21 +1.3 95,392 + Psyr_0088 0.21 +0.1 95,392 + Psyr_0088 0.21 +0.1 95,392 + Psyr_0088 0.21 +0.3 95,392 + Psyr_0088 0.21 +0.2 95,392 + Psyr_0088 0.21 -0.0 95,393 - Psyr_0088 0.21 -0.3 95,393 - Psyr_0088 0.21 +0.1 95,393 - Psyr_0088 0.21 +1.2 95,393 - Psyr_0088 0.21 -0.8 95,393 - Psyr_0088 0.21 +0.5 95,393 - Psyr_0088 0.21 -0.2 95,393 - Psyr_0088 0.21 -0.7 95,393 - Psyr_0088 0.21 -0.2 95,393 - Psyr_0088 0.21 +0.4 95,393 - Psyr_0088 0.21 +1.9 95,393 - Psyr_0088 0.21 -1.3 95,393 - Psyr_0088 0.21 -0.9 95,393 - Psyr_0088 0.21 +0.3 95,393 - Psyr_0088 0.21 -0.1 95,408 - Psyr_0088 0.22 -1.1 95,452 + Psyr_0088 0.26 +0.4 95,452 + Psyr_0088 0.26 +0.0 95,453 - Psyr_0088 0.27 -0.5 95,453 - Psyr_0088 0.27 -0.4 95,453 - Psyr_0088 0.27 +0.3 95,494 + Psyr_0088 0.31 +0.6 95,494 + Psyr_0088 0.31 -0.3 95,494 + Psyr_0088 0.31 -1.1 95,851 + Psyr_0088 0.66 +1.0 95,851 + Psyr_0088 0.66 +0.7 95,851 + Psyr_0088 0.66 +1.3 95,851 + Psyr_0088 0.66 -0.9 95,852 - Psyr_0088 0.66 +0.7 95,852 - Psyr_0088 0.66 +0.2 95,852 - Psyr_0088 0.66 +1.9 95,852 - Psyr_0088 0.66 +0.0 95,852 - Psyr_0088 0.66 -0.9 95,852 - Psyr_0088 0.66 -0.7 96,148 + +0.5 96,148 + +0.1 96,148 + +0.2 96,148 + +1.3 96,148 + +0.7 96,148 + +0.1 96,149 - -0.5 96,149 - -0.3 96,149 - +0.2 96,209 + -0.8 96,209 + +0.7 96,209 + +0.0 96,209 + -0.4 96,210 - -0.5 96,210 - +0.8 96,257 + +0.3 96,331 - +0.1 96,331 - +0.3 96,333 - -0.7 96,333 - -0.7 96,333 - -0.7 96,333 - -0.3 96,333 - +0.2 96,333 - -1.8 96,333 - +0.6 96,333 - +0.7 96,333 - +0.4 96,333 - +0.2 96,333 - +0.8 96,333 - +0.1 96,333 - -0.5 96,333 - +0.6 96,357 + +0.5 96,357 + -0.2 96,438 + -0.3 96,440 + +0.3 96,440 + +0.5 96,441 - +0.4 96,441 - +0.5 96,441 - +1.1 96,441 - +0.7 96,465 + +0.4 96,548 + -0.6 96,548 + -0.3 96,548 + +0.2 96,548 + +0.7 96,595 + +0.5 96,595 + +0.4 96,595 + +0.6 96,596 - -0.4 96,596 - +0.1 96,596 - +1.7 96,625 + -0.1 96,625 + +0.5 96,625 + +0.6 96,655 - -0.4 96,681 + +0.2 96,703 + -0.5 96,704 - +0.3 96,733 + -0.1 96,763 - +0.1 96,764 + +0.3 96,765 - -0.9 96,789 + -1.1 96,789 + -1.5 96,790 - -0.9 96,790 - -0.1 96,790 - +0.0 96,842 - +0.4 96,897 + -0.5 96,905 + +0.1 96,912 + +0.2
Or see this region's nucleotide sequence