Strain Fitness in Escherichia coli BW25113 around b3432
Experiment: LB Anaerobic with Spectinomycin 0.0000625 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB Anaerobic with Spectinomycin 0.0000625 mM |
---|---|---|---|---|---|
remove | |||||
3,568,499 | - | glgX | b3431 | 0.57 | +0.8 |
3,568,590 | - | glgX | b3431 | 0.62 | -0.4 |
3,568,602 | - | glgX | b3431 | 0.62 | -0.4 |
3,568,641 | + | glgX | b3431 | 0.64 | +0.9 |
3,568,649 | - | glgX | b3431 | 0.65 | +1.6 |
3,568,649 | - | glgX | b3431 | 0.65 | -0.8 |
3,568,649 | - | glgX | b3431 | 0.65 | +1.7 |
3,568,682 | + | glgX | b3431 | 0.67 | +0.8 |
3,568,695 | + | glgX | b3431 | 0.67 | +0.5 |
3,568,695 | + | glgX | b3431 | 0.67 | +1.0 |
3,568,695 | + | glgX | b3431 | 0.67 | +0.0 |
3,568,701 | + | glgX | b3431 | 0.67 | -0.5 |
3,568,708 | - | glgX | b3431 | 0.68 | -0.3 |
3,568,708 | - | glgX | b3431 | 0.68 | -0.7 |
3,568,726 | + | glgX | b3431 | 0.69 | +0.9 |
3,568,842 | - | glgX | b3431 | 0.75 | -0.0 |
3,568,886 | + | glgX | b3431 | 0.77 | +0.6 |
3,568,886 | + | glgX | b3431 | 0.77 | -0.5 |
3,568,930 | + | glgX | b3431 | 0.79 | +1.0 |
3,568,932 | + | glgX | b3431 | 0.79 | -1.4 |
3,568,935 | + | glgX | b3431 | 0.79 | -0.5 |
3,568,946 | - | glgX | b3431 | 0.80 | -0.1 |
3,568,984 | + | glgX | b3431 | 0.82 | -0.8 |
3,568,984 | + | glgX | b3431 | 0.82 | -0.5 |
3,569,026 | + | glgX | b3431 | 0.84 | +0.7 |
3,569,026 | + | glgX | b3431 | 0.84 | +0.3 |
3,569,034 | - | glgX | b3431 | 0.84 | -1.0 |
3,569,114 | + | glgX | b3431 | 0.88 | +0.6 |
3,569,114 | + | glgX | b3431 | 0.88 | -0.5 |
3,569,151 | - | -0.2 | |||
3,569,151 | - | +0.5 | |||
3,569,159 | + | +1.1 | |||
3,569,159 | + | -0.9 | |||
3,569,192 | - | -0.2 | |||
3,569,192 | - | -0.3 | |||
3,569,240 | + | +1.3 | |||
3,569,240 | + | -0.3 | |||
3,569,248 | - | +0.7 | |||
3,569,248 | - | -0.5 | |||
3,569,248 | - | +0.2 | |||
3,569,277 | + | -0.1 | |||
3,569,288 | + | -1.0 | |||
3,569,328 | + | +0.8 | |||
3,569,357 | - | -0.6 | |||
3,569,357 | - | -0.6 | |||
3,569,359 | + | +0.1 | |||
3,569,359 | + | -0.7 | |||
3,569,366 | - | +0.3 | |||
3,569,389 | + | +0.2 | |||
3,569,429 | + | +2.1 | |||
3,569,429 | + | -2.4 | |||
3,569,432 | + | +0.3 | |||
3,569,432 | + | +0.1 | |||
3,569,437 | - | +0.9 | |||
3,569,437 | - | -0.5 | |||
3,569,437 | - | -0.3 | |||
3,569,437 | - | -1.4 | |||
3,569,442 | - | -0.5 | |||
3,569,442 | - | -1.2 | |||
3,569,452 | + | -0.2 | |||
3,569,460 | - | -0.9 | |||
3,569,460 | - | +1.1 | |||
3,569,460 | - | -1.5 | |||
3,569,516 | + | -0.4 | |||
3,569,523 | - | -1.5 | |||
3,569,523 | - | +0.5 | |||
3,569,541 | + | -1.3 | |||
3,569,541 | + | -0.2 | |||
3,569,556 | + | +1.5 | |||
3,569,556 | + | -2.2 | |||
3,569,635 | - | glgB | b3432 | 0.14 | -0.6 |
3,569,667 | - | glgB | b3432 | 0.15 | -2.1 |
3,569,702 | - | glgB | b3432 | 0.17 | +0.4 |
3,569,723 | + | glgB | b3432 | 0.18 | -0.9 |
3,569,779 | - | glgB | b3432 | 0.20 | -0.4 |
3,569,813 | + | glgB | b3432 | 0.22 | +0.2 |
3,569,828 | - | glgB | b3432 | 0.22 | -0.5 |
3,569,896 | - | glgB | b3432 | 0.25 | -0.5 |
3,569,903 | + | glgB | b3432 | 0.26 | +1.4 |
3,569,960 | - | glgB | b3432 | 0.28 | +0.1 |
3,569,960 | - | glgB | b3432 | 0.28 | +2.0 |
3,569,984 | + | glgB | b3432 | 0.29 | +0.7 |
3,569,984 | + | glgB | b3432 | 0.29 | +0.6 |
3,569,984 | + | glgB | b3432 | 0.29 | +0.4 |
3,570,002 | + | glgB | b3432 | 0.30 | +1.6 |
3,570,002 | + | glgB | b3432 | 0.30 | -0.3 |
3,570,007 | + | glgB | b3432 | 0.31 | +0.4 |
3,570,011 | + | glgB | b3432 | 0.31 | -0.1 |
3,570,014 | - | glgB | b3432 | 0.31 | +0.9 |
3,570,014 | - | glgB | b3432 | 0.31 | +0.9 |
3,570,015 | - | glgB | b3432 | 0.31 | -1.0 |
3,570,015 | - | glgB | b3432 | 0.31 | -2.2 |
3,570,061 | - | glgB | b3432 | 0.33 | +1.4 |
3,570,061 | - | glgB | b3432 | 0.33 | +0.2 |
3,570,062 | + | glgB | b3432 | 0.33 | -0.0 |
3,570,097 | + | glgB | b3432 | 0.35 | -0.0 |
3,570,105 | - | glgB | b3432 | 0.35 | +0.5 |
3,570,115 | - | glgB | b3432 | 0.35 | +0.2 |
3,570,116 | - | glgB | b3432 | 0.36 | +0.6 |
3,570,231 | - | glgB | b3432 | 0.41 | +0.2 |
3,570,281 | - | glgB | b3432 | 0.43 | +0.4 |
3,570,288 | + | glgB | b3432 | 0.43 | +0.8 |
3,570,288 | + | glgB | b3432 | 0.43 | +0.1 |
3,570,325 | + | glgB | b3432 | 0.45 | -0.5 |
3,570,325 | + | glgB | b3432 | 0.45 | +0.7 |
3,570,345 | + | glgB | b3432 | 0.46 | +0.6 |
3,570,345 | + | glgB | b3432 | 0.46 | -0.6 |
3,570,403 | + | glgB | b3432 | 0.49 | +1.1 |
3,570,406 | - | glgB | b3432 | 0.49 | +1.9 |
3,570,406 | - | glgB | b3432 | 0.49 | +1.2 |
3,570,406 | - | glgB | b3432 | 0.49 | +0.2 |
3,570,419 | + | glgB | b3432 | 0.49 | +0.9 |
3,570,444 | + | glgB | b3432 | 0.51 | +1.0 |
3,570,459 | - | glgB | b3432 | 0.51 | +0.3 |
3,570,484 | + | glgB | b3432 | 0.52 | +1.0 |
3,570,491 | - | glgB | b3432 | 0.53 | -0.5 |
3,570,491 | - | glgB | b3432 | 0.53 | +0.5 |
3,570,492 | - | glgB | b3432 | 0.53 | +0.1 |
3,570,506 | - | glgB | b3432 | 0.53 | -0.3 |
3,570,517 | - | glgB | b3432 | 0.54 | -1.2 |
3,570,645 | + | glgB | b3432 | 0.60 | -0.7 |
3,570,665 | - | glgB | b3432 | 0.61 | +0.1 |
3,570,675 | - | glgB | b3432 | 0.61 | -0.9 |
3,570,679 | - | glgB | b3432 | 0.61 | -0.6 |
3,570,679 | - | glgB | b3432 | 0.61 | -0.5 |
3,570,705 | + | glgB | b3432 | 0.62 | +0.5 |
3,570,733 | + | glgB | b3432 | 0.64 | +0.4 |
3,570,832 | + | glgB | b3432 | 0.68 | +0.0 |
3,570,849 | - | glgB | b3432 | 0.69 | +0.2 |
3,570,890 | + | glgB | b3432 | 0.71 | +0.0 |
3,570,913 | - | glgB | b3432 | 0.72 | +0.2 |
3,570,941 | + | glgB | b3432 | 0.73 | -0.5 |
3,570,968 | - | glgB | b3432 | 0.74 | -0.9 |
3,571,005 | - | glgB | b3432 | 0.76 | +0.7 |
3,571,005 | - | glgB | b3432 | 0.76 | +0.2 |
3,571,036 | + | glgB | b3432 | 0.78 | -0.0 |
3,571,125 | - | glgB | b3432 | 0.82 | -0.2 |
3,571,125 | - | glgB | b3432 | 0.82 | +0.2 |
3,571,179 | - | glgB | b3432 | 0.84 | -0.0 |
3,571,179 | - | glgB | b3432 | 0.84 | +0.8 |
3,571,189 | + | glgB | b3432 | 0.85 | +0.0 |
3,571,227 | + | glgB | b3432 | 0.86 | -1.1 |
3,571,227 | + | glgB | b3432 | 0.86 | -0.8 |
3,571,269 | + | glgB | b3432 | 0.88 | -0.6 |
3,571,322 | - | -0.4 | |||
3,571,322 | - | +0.3 | |||
3,571,384 | + | -0.9 | |||
3,571,388 | - | -0.8 | |||
3,571,398 | - | +0.9 | |||
3,571,510 | + | -0.1 | |||
3,571,510 | + | +0.1 | |||
3,571,546 | + | -0.6 | |||
3,571,554 | - | +0.2 | |||
3,571,599 | - | -0.3 | |||
3,571,606 | + | +0.7 | |||
3,571,614 | - | -0.4 | |||
3,571,624 | - | +1.0 | |||
3,571,634 | - | -0.5 | |||
3,571,659 | + | +0.8 | |||
3,571,688 | - | -0.1 | |||
3,571,702 | - | -0.7 | |||
3,571,764 | - | -0.4 | |||
3,571,771 | - | +0.0 | |||
3,571,771 | - | -0.0 |
Or see this region's nucleotide sequence