Strain Fitness in Escherichia coli BW25113 around b1769

Experiment: LB Anaerobic with Doxycycline hyclate 0.000000390625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB Anaerobic with Doxycycline hyclate 0.000000390625 mM
1,849,751	+	ansA	b1767	0.85	+0.0
1,849,785	+	ansA	b1767	0.89	+0.7
1,849,896	+				-0.0
1,849,896	+				+0.5
1,850,057	-	ydjB	b1768	0.23	+1.2
1,850,262	+	ydjB	b1768	0.55	+0.9
1,850,272	-	ydjB	b1768	0.56	+0.3
1,850,313	+	ydjB	b1768	0.63	+1.5
1,850,352	+	ydjB	b1768	0.69	+0.4
1,850,353	+	ydjB	b1768	0.69	-0.3
1,850,365	+	ydjB	b1768	0.71	+0.1
1,850,365	+	ydjB	b1768	0.71	-0.4
1,850,367	+	ydjB	b1768	0.71	+0.6
1,850,372	+	ydjB	b1768	0.72	+1.4
1,850,372	+	ydjB	b1768	0.72	+2.0
1,850,463	+	ydjB	b1768	0.86	+1.8
1,850,463	+	ydjB	b1768	0.86	-0.6
1,850,463	+	ydjB	b1768	0.86	-0.4
1,850,484	+	ydjB	b1768	0.89	+0.2
1,850,523	+				+0.7
1,850,552	+				+1.1
1,850,552	+				+0.7
1,850,567	+				-1.6
1,850,567	+				+0.4
1,850,570	+				-0.6
1,850,570	+				-1.9
1,850,669	+				-0.6
1,850,718	-				+0.1
1,850,718	-				+1.0
1,850,720	+				-2.4
1,850,728	+				-0.0
1,850,728	+				-2.2
1,850,728	-				+1.1
1,850,738	+				-0.4
1,850,752	-				-0.0
1,850,795	-	ydjE	b1769	0.11	+0.2
1,850,795	-	ydjE	b1769	0.11	+0.0
1,850,795	-	ydjE	b1769	0.11	+1.4
1,850,796	+	ydjE	b1769	0.11	+0.4
1,850,796	+	ydjE	b1769	0.11	-1.9
1,850,803	+	ydjE	b1769	0.12	-1.5
1,850,804	-	ydjE	b1769	0.12	+0.4
1,850,812	-	ydjE	b1769	0.12	-2.2
1,850,816	-	ydjE	b1769	0.13	+0.4
1,850,836	+	ydjE	b1769	0.14	-0.6
1,850,851	+	ydjE	b1769	0.15	+1.4
1,850,852	+	ydjE	b1769	0.15	+0.4
1,850,853	+	ydjE	b1769	0.15	+0.4
1,850,854	+	ydjE	b1769	0.15	-1.2
1,850,907	+	ydjE	b1769	0.19	+0.4
1,850,907	+	ydjE	b1769	0.19	+0.4
1,850,942	+	ydjE	b1769	0.22	-1.2
1,850,957	+	ydjE	b1769	0.23	-0.4
1,850,978	+	ydjE	b1769	0.25	+0.4
1,851,163	-	ydjE	b1769	0.38	+0.4
1,851,176	-	ydjE	b1769	0.39	+0.4
1,851,276	-	ydjE	b1769	0.46	+2.0
1,851,280	-	ydjE	b1769	0.47	-0.6
1,851,297	-	ydjE	b1769	0.48	-0.6
1,851,312	-	ydjE	b1769	0.49	+0.4
1,851,312	-	ydjE	b1769	0.49	+0.4
1,851,348	-	ydjE	b1769	0.52	+0.4
1,851,348	-	ydjE	b1769	0.52	+0.4
1,851,364	-	ydjE	b1769	0.53	-0.6
1,851,435	-	ydjE	b1769	0.58	+0.4
1,851,457	-	ydjE	b1769	0.60	+0.4
1,851,521	-	ydjE	b1769	0.64	-0.6
1,851,521	-	ydjE	b1769	0.64	-1.2
1,851,526	-	ydjE	b1769	0.65	-0.0
1,851,666	+	ydjE	b1769	0.75	+0.4
1,851,668	+	ydjE	b1769	0.75	-0.6
1,851,671	+	ydjE	b1769	0.75	+0.4
1,851,671	+	ydjE	b1769	0.75	+0.4
1,851,679	-	ydjE	b1769	0.76	+0.4
1,851,703	+	ydjE	b1769	0.78	-1.2
1,851,716	+	ydjE	b1769	0.79	-0.6
1,851,736	+	ydjE	b1769	0.80	-0.4
1,851,769	+	ydjE	b1769	0.83	+0.2
1,851,774	+	ydjE	b1769	0.83	+0.5
1,851,832	+	ydjE	b1769	0.87	-0.8
1,851,877	+				+1.2
1,851,968	+				+0.4
1,851,968	+				-0.6
1,851,976	-				+0.4
1,852,035	+				+0.1
1,852,163	-				-0.2
1,852,165	-				-0.4
1,852,165	-				-0.5
1,852,165	-				-0.0
1,852,167	-				-0.0
1,852,172	-				-0.1
1,852,224	-	ydjF	b1770	0.14	+0.0
1,852,252	-	ydjF	b1770	0.17	+0.1
1,852,252	-	ydjF	b1770	0.17	+0.2
1,852,252	-	ydjF	b1770	0.17	+0.5
1,852,252	-	ydjF	b1770	0.17	+0.1
1,852,252	-	ydjF	b1770	0.17	-1.6
1,852,264	-	ydjF	b1770	0.19	-0.6
1,852,264	-	ydjF	b1770	0.19	+0.4
1,852,388	-	ydjF	b1770	0.35	-0.7
1,852,457	-	ydjF	b1770	0.44	-0.7
1,852,527	+	ydjF	b1770	0.54	-0.6
1,852,532	+	ydjF	b1770	0.54	+0.4
1,852,535	-	ydjF	b1770	0.55	+0.2
1,852,535	-	ydjF	b1770	0.55	+0.4
1,852,535	-	ydjF	b1770	0.55	-1.6
1,852,539	+	ydjF	b1770	0.55	+0.4
1,852,576	-	ydjF	b1770	0.60	-0.7
1,852,581	-	ydjF	b1770	0.61	+0.1
1,852,606	+	ydjF	b1770	0.64	+0.4
1,852,611	-	ydjF	b1770	0.65	+0.1
1,852,636	-	ydjF	b1770	0.68	-0.3
1,852,853	+				+0.4