Strain Fitness in Pseudomonas putida KT2440 around PP_5269

Experiment: LB 0.1x with 55.5 mM D-Glucose; pH 4.6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 0.1x with 55.5 mM D-Glucose; pH 4.6
6,017,292	+				+0.3
6,017,354	+				+0.7
6,017,395	-				+0.9
6,017,558	+		PP_5268	0.16	+0.0
6,017,558	+		PP_5268	0.16	+0.1
6,017,558	+		PP_5268	0.16	+0.0
6,017,559	-		PP_5268	0.16	-0.3
6,017,559	-		PP_5268	0.16	-0.6
6,017,559	-		PP_5268	0.16	-0.9
6,017,561	+		PP_5268	0.17	-0.7
6,017,561	+		PP_5268	0.17	+0.6
6,017,562	-		PP_5268	0.17	+0.1
6,017,562	-		PP_5268	0.17	-1.4
6,017,562	-		PP_5268	0.17	-0.3
6,017,562	-		PP_5268	0.17	+0.3
6,017,769	+		PP_5268	0.54	+1.2
6,017,769	+		PP_5268	0.54	-1.1
6,017,770	-		PP_5268	0.55	+0.9
6,017,770	-		PP_5268	0.55	+0.4
6,017,792	+		PP_5268	0.59	+0.3
6,017,889	+		PP_5268	0.76	+0.3
6,017,890	-		PP_5268	0.77	+0.8
6,017,899	+		PP_5268	0.78	+0.3
6,017,899	+		PP_5268	0.78	-0.4
6,017,899	+		PP_5268	0.78	-1.7
6,017,899	+		PP_5268	0.78	-0.7
6,017,900	-		PP_5268	0.78	-0.8
6,017,900	-		PP_5268	0.78	-0.0
6,018,065	-				+0.4
6,018,065	-				-0.6
6,018,086	-				-0.3
6,018,089	+				-0.5
6,018,089	+				+0.3
6,018,089	+				+0.3
6,018,140	-				+0.2
6,019,212	-				-1.3
6,019,346	-				-0.1
6,019,412	+				-1.3
6,019,412	+				+0.3
6,019,413	-				-0.3
6,019,506	-		PP_5270	0.12	-2.5
6,019,506	-		PP_5270	0.12	-0.1
6,019,631	-		PP_5270	0.22	-0.3
6,019,756	+		PP_5270	0.32	+1.3
6,019,756	+		PP_5270	0.32	-1.1
6,019,756	+		PP_5270	0.32	-1.5
6,019,756	+		PP_5270	0.32	-1.3
6,019,838	-		PP_5270	0.38	+0.4
6,019,883	-		PP_5270	0.41	-0.1
6,020,158	+		PP_5270	0.62	+0.3
6,020,181	+		PP_5270	0.64	-0.9