Experiment: LB 0.1x with 55.5 mM D-Glucose; pH 4.6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_1505 and PP_1506 are separated by 257 nucleotides PP_1506 and PP_1507 are separated by 139 nucleotides PP_1507 and PP_1508 are separated by 101 nucleotides
PP_1505: PP_1505 - Phosphoenolpyruvate carboxylase, at 1,709,382 to 1,712,009
_1505
PP_1506: PP_1506 - Adenylate kinase, at 1,712,267 to 1,712,917
_1506
PP_1507: PP_1507 - endopeptidase, at 1,713,057 to 1,713,731
_1507
PP_1508: PP_1508 - conserved protein of unknown function, at 1,713,833 to 1,714,153
_1508
Position (kb)
1712
1713 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1711.269 kb on + strand, within PP_1505 at 1711.269 kb on + strand, within PP_1505 at 1711.270 kb on - strand, within PP_1505 at 1711.410 kb on + strand, within PP_1505 at 1711.410 kb on + strand, within PP_1505 at 1711.710 kb on + strand, within PP_1505 at 1711.711 kb on - strand, within PP_1505 at 1711.747 kb on + strand at 1711.748 kb on - strand at 1711.748 kb on - strand at 1711.768 kb on + strand at 1711.768 kb on + strand at 1711.865 kb on + strand at 1711.866 kb on - strand at 1711.866 kb on - strand at 1711.869 kb on + strand at 1711.869 kb on + strand at 1711.870 kb on - strand at 1711.870 kb on - strand at 1711.870 kb on - strand at 1712.008 kb on - strand at 1712.042 kb on + strand at 1712.161 kb on + strand at 1713.016 kb on - strand at 1713.016 kb on - strand at 1713.016 kb on - strand at 1713.017 kb on + strand at 1713.017 kb on + strand at 1713.709 kb on + strand at 1713.762 kb on + strand at 1713.869 kb on - strand, within PP_1508
Per-strain Table
Position Strand Gene LocusTag Fraction LB 0.1x with 55.5 mM D-Glucose; pH 4.6 remove 1,711,269 + PP_1505 0.72 -0.8 1,711,269 + PP_1505 0.72 -1.0 1,711,270 - PP_1505 0.72 +0.2 1,711,410 + PP_1505 0.77 -0.2 1,711,410 + PP_1505 0.77 -1.9 1,711,710 + PP_1505 0.89 +0.2 1,711,711 - PP_1505 0.89 -0.3 1,711,747 + +1.2 1,711,748 - +0.8 1,711,748 - -1.4 1,711,768 + -3.0 1,711,768 + +1.0 1,711,865 + +0.5 1,711,866 - -0.6 1,711,866 - -1.8 1,711,869 + -1.2 1,711,869 + +0.5 1,711,870 - +0.4 1,711,870 - -0.4 1,711,870 - +0.8 1,712,008 - +0.4 1,712,042 + -0.3 1,712,161 + -0.2 1,713,016 - -0.2 1,713,016 - -1.0 1,713,016 - +0.2 1,713,017 + -1.2 1,713,017 + +0.4 1,713,709 + -0.6 1,713,762 + +0.4 1,713,869 - PP_1508 0.11 -0.2
Or see this region's nucleotide sequence