Strain Fitness in Escherichia coli BW25113 around b0951

Experiment: LB Anaerobic with Doxycycline hyclate 0.00000078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB Anaerobic with Doxycycline hyclate 0.00000078125 mM
1,011,607	-	pqiA	b0950	0.31	-0.7
1,011,620	-	pqiA	b0950	0.32	-0.9
1,011,748	+	pqiA	b0950	0.42	-1.9
1,011,794	+	pqiA	b0950	0.45	-0.9
1,011,876	+	pqiA	b0950	0.52	-1.9
1,011,956	-	pqiA	b0950	0.58	+0.5
1,011,982	+	pqiA	b0950	0.60	-0.3
1,012,008	-	pqiA	b0950	0.63	-1.0
1,012,008	-	pqiA	b0950	0.63	+0.7
1,012,011	+	pqiA	b0950	0.63	-1.4
1,012,067	+	pqiA	b0950	0.67	-1.3
1,012,067	+	pqiA	b0950	0.67	-1.3
1,012,131	-	pqiA	b0950	0.72	-0.9
1,012,166	-	pqiA	b0950	0.75	-1.2
1,012,166	-	pqiA	b0950	0.75	-0.3
1,012,181	-	pqiA	b0950	0.76	+0.1
1,012,260	-	pqiA	b0950	0.83	-1.6
1,012,323	-	pqiA	b0950	0.88	-2.1
1,012,323	-	pqiA	b0950	0.88	+0.1
1,012,450	+				+0.1
1,012,450	+				+0.2
1,012,460	+				+0.7
1,012,570	-				+1.3
1,012,570	-				-0.1
1,012,625	-				-1.3
1,012,625	-				+0.7
1,012,672	+	pqiB	b0951	0.12	-1.5
1,012,805	+	pqiB	b0951	0.20	-1.6
1,012,847	+	pqiB	b0951	0.22	+0.4
1,012,865	-	pqiB	b0951	0.23	-2.1
1,012,865	-	pqiB	b0951	0.23	-0.3
1,013,007	+	pqiB	b0951	0.32	-0.8
1,013,020	-	pqiB	b0951	0.33	-0.6
1,013,020	-	pqiB	b0951	0.33	-3.4
1,013,031	-	pqiB	b0951	0.33	-1.2
1,013,108	-	pqiB	b0951	0.38	-0.6
1,013,119	+	pqiB	b0951	0.39	-1.4
1,013,144	+	pqiB	b0951	0.40	+1.9
1,013,168	-	pqiB	b0951	0.42	+0.0
1,013,178	-	pqiB	b0951	0.42	-0.1
1,013,178	-	pqiB	b0951	0.42	+0.2
1,013,211	-	pqiB	b0951	0.44	-1.8
1,013,329	-	pqiB	b0951	0.52	-0.9
1,013,374	+	pqiB	b0951	0.54	+0.1
1,013,374	+	pqiB	b0951	0.54	-1.3
1,013,389	-	pqiB	b0951	0.55	-0.3
1,013,399	+	pqiB	b0951	0.56	-0.5
1,013,632	-	pqiB	b0951	0.70	+0.5
1,013,632	-	pqiB	b0951	0.70	-1.1
1,013,633	-	pqiB	b0951	0.70	-0.9
1,013,634	-	pqiB	b0951	0.70	-0.9
1,013,635	-	pqiB	b0951	0.70	-1.4
1,013,730	+	pqiB	b0951	0.76	-0.6
1,013,738	-	pqiB	b0951	0.77	-1.1
1,013,811	-	pqiB	b0951	0.81	-1.1
1,013,811	-	pqiB	b0951	0.81	-1.2
1,013,858	-	pqiB	b0951	0.84	-1.3
1,013,858	-	pqiB	b0951	0.84	-0.9
1,013,949	-	pqiB	b0951	0.89	-1.6
1,013,955	+	pqiB	b0951	0.90	-0.1
1,013,955	+	pqiB	b0951	0.90	+0.1
1,014,064	-				-0.9
1,014,064	-				-1.9
1,014,159	-				+0.7
1,014,206	+	ymbA	b0952	0.15	-1.5
1,014,216	+	ymbA	b0952	0.17	-0.5
1,014,216	+	ymbA	b0952	0.17	+1.1
1,014,263	+	ymbA	b0952	0.26	-0.8
1,014,268	+	ymbA	b0952	0.26	-0.5
1,014,303	-	ymbA	b0952	0.33	-0.3
1,014,428	-	ymbA	b0952	0.55	+1.5
1,014,428	-	ymbA	b0952	0.55	-0.6
1,014,587	+	ymbA	b0952	0.83	-0.9
1,014,588	+	ymbA	b0952	0.83	-0.6
1,014,588	+	ymbA	b0952	0.83	-0.7
1,014,619	-	ymbA	b0952	0.89	-0.0
1,014,959	+	rmf	b0953	0.12	+0.3
1,014,974	+	rmf	b0953	0.21	-0.3
1,014,974	+	rmf	b0953	0.21	+0.2
1,015,089	+				+0.0
1,015,097	-				-0.8