Strain Fitness in Escherichia coli BW25113 around b4244

Experiment: LB Anaerobic with Cefoxitin 0.0000015625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB Anaerobic with Cefoxitin 0.0000015625 mM
4,468,013	+	mgtA	b4242	0.88	+0.8
4,468,058	-	mgtA	b4242	0.89	+0.8
4,468,058	-	mgtA	b4242	0.89	+1.4
4,468,072	-	mgtA	b4242	0.90	+0.0
4,468,097	+				+0.3
4,468,112	+				-1.2
4,468,112	+				+0.8
4,468,135	-				+0.3
4,468,137	+				+0.3
4,468,147	-				-1.0
4,468,212	+				-0.2
4,468,258	-				+0.3
4,468,267	+				+2.4
4,468,267	+				+0.8
4,468,284	+				+0.4
4,468,284	+				+3.2
4,468,285	-				-0.4
4,468,292	-				-1.2
4,468,292	-				-0.2
4,468,292	-				+2.4
4,468,346	+				-0.2
4,468,346	+				-0.2
4,468,346	+				+0.8
4,468,466	+				-0.2
4,468,466	+				+0.6
4,468,466	+				-0.8
4,468,466	+				+1.4
4,468,470	+				+0.4
4,468,519	-				-1.2
4,468,521	+				-1.7
4,468,521	+				-0.9
4,468,598	-	yjgF	b4243	0.12	+0.8
4,468,615	+	yjgF	b4243	0.17	-0.9
4,468,615	+	yjgF	b4243	0.17	-0.4
4,468,622	-	yjgF	b4243	0.19	-0.4
4,468,648	+	yjgF	b4243	0.25	-0.4
4,468,658	-				-0.2
4,468,673	+	yjgF	b4243	0.32	+0.8
4,468,743	-	yjgF	b4243	0.50	+1.3
4,468,743	-	yjgF	b4243	0.50	+0.8
4,468,743	-	yjgF	b4243	0.50	+0.0
4,468,744	-	yjgF	b4243	0.50	-0.3
4,468,744	-	yjgF	b4243	0.50	-0.0
4,468,749	+	yjgF	b4243	0.51	+0.0
4,468,757	-	yjgF	b4243	0.53	+2.1
4,468,757	-	yjgF	b4243	0.53	-0.2
4,468,860	+	yjgF	b4243	0.80	+0.5
4,468,890	-	yjgF	b4243	0.88	-0.5
4,468,890	-	yjgF	b4243	0.88	+0.1
4,468,898	-				-0.6
4,468,899	-				+0.6
4,469,025	+				-0.7
4,469,025	+				+0.5
4,469,059	-	pyrI	b4244	0.11	+1.1
4,469,059	-	pyrI	b4244	0.11	+0.3
4,469,121	-	pyrI	b4244	0.24	-0.4
4,469,140	-	pyrI	b4244	0.28	-0.2
4,469,155	-	pyrI	b4244	0.32	+0.1
4,469,157	+	pyrI	b4244	0.32	-1.3
4,469,165	-	pyrI	b4244	0.34	+0.6
4,469,179	-	pyrI	b4244	0.37	-2.2
4,469,179	-	pyrI	b4244	0.37	-0.6
4,469,186	+	pyrI	b4244	0.38	-0.1
4,469,199	+	pyrI	b4244	0.41	+0.6
4,469,204	+	pyrI	b4244	0.42	+0.1
4,469,208	-	pyrI	b4244	0.43	+0.2
4,469,218	+	pyrI	b4244	0.45	-0.5
4,469,245	+	pyrI	b4244	0.51	+0.4
4,469,245	+	pyrI	b4244	0.51	-0.9
4,469,348	-	pyrI	b4244	0.73	-0.0
4,469,366	-	pyrI	b4244	0.77	-0.8
4,469,379	-	pyrI	b4244	0.80	-1.5
4,469,379	-	pyrI	b4244	0.80	-1.2
4,469,414	+	pyrI	b4244	0.88	-0.6
4,469,422	-	pyrI	b4244	0.89	+0.1
4,469,442	-				+0.1
4,469,501	+				-0.2
4,469,560	-				+0.6
4,469,562	+				+1.8
4,469,579	+	pyrB	b4245	0.10	+2.6
4,469,579	+	pyrB	b4245	0.10	-0.9
4,469,648	+	pyrB	b4245	0.18	-0.5
4,469,715	-	pyrB	b4245	0.25	+0.1
4,469,744	-	pyrB	b4245	0.28	-0.8
4,469,746	-	pyrB	b4245	0.28	+0.1
4,469,751	+	pyrB	b4245	0.29	-0.3
4,469,777	+	pyrB	b4245	0.31	+0.6
4,469,780	+	pyrB	b4245	0.32	-0.3
4,469,780	+	pyrB	b4245	0.32	+0.8
4,469,787	+	pyrB	b4245	0.32	-0.2
4,469,793	-	pyrB	b4245	0.33	-0.6
4,469,793	-	pyrB	b4245	0.33	-0.5
4,469,817	+	pyrB	b4245	0.36	+0.2
4,469,937	-	pyrB	b4245	0.49	-0.1
4,469,945	+	pyrB	b4245	0.49	-0.5
4,469,952	+	pyrB	b4245	0.50	-0.7
4,469,966	+	pyrB	b4245	0.52	+0.3
4,470,043	+	pyrB	b4245	0.60	+1.5
4,470,104	+	pyrB	b4245	0.66	-0.1
4,470,104	+	pyrB	b4245	0.66	-0.2
4,470,106	+	pyrB	b4245	0.67	-0.3
4,470,200	+	pyrB	b4245	0.77	-0.4
4,470,224	+	pyrB	b4245	0.79	-0.2
4,470,257	+	pyrB	b4245	0.83	-0.8
4,470,359	-				+0.4
4,470,427	-				+1.8
4,470,427	-				-0.4
4,470,466	+	pyrL	b4246	0.33	+0.0
4,470,466	+	pyrL	b4246	0.33	+0.2