Strain Fitness in Escherichia coli BW25113 around b2095

Experiment: LB Anaerobic with Cefoxitin 0.000003125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB Anaerobic with Cefoxitin 0.000003125 mM
2,172,130	+	gatC	b2092	0.87	+0.8
2,172,137	-	gatC	b2092	0.88	+2.5
2,172,247	+				-0.2
2,172,255	+				+0.8
2,172,285	-				+1.9
2,172,285	-				+3.5
2,172,295	+				+0.8
2,172,296	-				+2.5
2,172,303	-				+2.1
2,172,305	-				+1.6
2,172,315	-				+2.8
2,172,430	-	gatB	b2093	0.44	+1.8
2,172,542	-	gatB	b2093	0.84	+0.0
2,172,552	-	gatB	b2093	0.87	-0.2
2,172,688	-	gatA	b2094	0.15	+0.6
2,172,690	-	gatA	b2094	0.16	+0.6
2,172,690	-	gatA	b2094	0.16	-0.7
2,172,716	-	gatA	b2094	0.21	-0.2
2,172,726	-	gatA	b2094	0.24	+1.0
2,172,807	-	gatA	b2094	0.42	+0.1
2,172,839	-	gatA	b2094	0.49	+0.8
2,172,917	-	gatA	b2094	0.66	+0.9
2,172,978	-	gatA	b2094	0.79	+0.7
2,172,978	-	gatA	b2094	0.79	+2.7
2,172,983	+	gatA	b2094	0.80	+0.8
2,173,004	-	gatA	b2094	0.85	-0.4
2,173,067	+				+0.8
2,173,075	-				+0.3
2,173,177	-				+0.5
2,173,177	-				+0.9
2,173,197	-				+2.0
2,173,197	-				+1.8
2,173,205	-				+2.4
2,173,205	-				+0.4
2,173,233	-	gatZ	b2095	0.12	-0.9
2,173,440	-	gatZ	b2095	0.28	+1.6
2,173,444	-	gatZ	b2095	0.29	+1.6
2,173,451	+	gatZ	b2095	0.29	+0.0
2,173,451	+	gatZ	b2095	0.29	+3.9
2,173,459	-	gatZ	b2095	0.30	+1.2
2,173,459	-	gatZ	b2095	0.30	+1.2
2,173,485	-	gatZ	b2095	0.32	-0.2
2,173,588	-	gatZ	b2095	0.40	+1.6
2,173,638	-	gatZ	b2095	0.44	+2.0
2,173,717	-	gatZ	b2095	0.50	+1.5
2,173,783	+	gatZ	b2095	0.56	+3.8
2,173,791	-	gatZ	b2095	0.56	+0.6
2,173,791	-	gatZ	b2095	0.56	+1.0
2,173,870	-	gatZ	b2095	0.62	+1.2
2,174,277	+				+2.6
2,174,277	+				+3.4
2,174,285	-				+2.4
2,174,285	-				+2.9
2,174,285	-				+3.7
2,174,371	+				+3.3
2,174,422	-				+0.8
2,174,422	-				+0.2
2,174,469	+	gatY	b2096	0.11	+2.3
2,174,749	+	gatY	b2096	0.44	+3.2
2,174,749	+	gatY	b2096	0.44	+4.7
2,175,002	+	gatY	b2096	0.74	+4.0
2,175,029	+	gatY	b2096	0.77	+3.2
2,175,129	+	gatY	b2096	0.89	+3.4
2,175,189	+				+3.2
2,175,226	+				+0.8
2,175,226	+				+3.4