Strain Fitness in Escherichia coli BW25113 around b0949

Experiment: LB Anaerobic with Ceftriaxone hemi(heptahydrate) 0.000000625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB Anaerobic with Ceftriaxone hemi(heptahydrate) 0.000000625 mM
1,008,248	-	ycbY	b0948	0.56	+0.1
1,008,248	-	ycbY	b0948	0.56	-0.2
1,008,322	-	ycbY	b0948	0.60	-3.2
1,008,322	-	ycbY	b0948	0.60	-1.5
1,008,446	-	ycbY	b0948	0.65	-0.8
1,008,573	-	ycbY	b0948	0.71	+1.8
1,008,573	-	ycbY	b0948	0.71	+0.3
1,008,588	+	ycbY	b0948	0.72	-0.2
1,008,588	+	ycbY	b0948	0.72	+0.1
1,008,593	+	ycbY	b0948	0.72	-0.3
1,008,622	+	ycbY	b0948	0.74	-1.7
1,008,679	-	ycbY	b0948	0.76	-0.4
1,008,735	+	ycbY	b0948	0.79	+0.5
1,008,749	+	ycbY	b0948	0.80	-0.5
1,008,749	+	ycbY	b0948	0.80	-0.8
1,008,757	-	ycbY	b0948	0.80	+0.3
1,008,757	-	ycbY	b0948	0.80	-1.1
1,008,778	-	ycbY	b0948	0.81	-1.1
1,008,849	-	ycbY	b0948	0.84	+1.1
1,009,006	+				-0.1
1,009,048	+				+1.3
1,009,048	+				-0.2
1,009,159	-				-1.5
1,009,159	-				-0.3
1,009,178	-				-1.3
1,009,178	-				+1.5
1,009,256	-				-2.4
1,009,256	-				+0.8
1,009,560	-	uup	b0949	0.20	-0.6
1,009,560	-	uup	b0949	0.20	+0.8
1,009,581	-	uup	b0949	0.21	+0.2
1,009,581	-	uup	b0949	0.21	-0.6
1,009,648	+	uup	b0949	0.24	-0.0
1,009,699	+	uup	b0949	0.27	-0.2
1,009,699	+	uup	b0949	0.27	-0.2
1,009,707	-	uup	b0949	0.27	+0.5
1,009,772	+	uup	b0949	0.31	-0.1
1,009,814	+	uup	b0949	0.33	+1.8
1,009,814	+	uup	b0949	0.33	+1.4
1,009,839	+	uup	b0949	0.34	+1.0
1,009,839	+	uup	b0949	0.34	-0.2
1,009,904	-	uup	b0949	0.38	-0.6
1,009,996	-	uup	b0949	0.42	+1.2
1,010,004	+	uup	b0949	0.43	+0.3
1,010,156	-	uup	b0949	0.51	+1.5
1,010,325	-	uup	b0949	0.60	-1.8
1,010,439	+	uup	b0949	0.66	+0.5
1,010,589	-	uup	b0949	0.73	-1.0
1,010,589	-	uup	b0949	0.73	+0.6
1,010,662	-	uup	b0949	0.77	-0.7
1,010,752	-	uup	b0949	0.82	+2.8
1,010,782	+	uup	b0949	0.84	+0.2
1,010,882	-	uup	b0949	0.89	+1.2
1,010,882	-	uup	b0949	0.89	-0.1
1,011,118	+				-0.2
1,011,607	-	pqiA	b0950	0.31	-0.6
1,011,620	-	pqiA	b0950	0.32	-0.1
1,011,748	+	pqiA	b0950	0.42	-0.8
1,011,794	+	pqiA	b0950	0.45	-0.2
1,011,876	+	pqiA	b0950	0.52	-1.8
1,011,956	-	pqiA	b0950	0.58	-0.4
1,011,982	+	pqiA	b0950	0.60	-0.7
1,012,008	-	pqiA	b0950	0.63	-0.0
1,012,008	-	pqiA	b0950	0.63	+1.2
1,012,011	+	pqiA	b0950	0.63	-1.0
1,012,067	+	pqiA	b0950	0.67	-0.1
1,012,067	+	pqiA	b0950	0.67	-0.4