Strain Fitness in Escherichia coli BW25113 around b2801

Experiment: LB Anaerobic with Benzethonium chloride 0.00003125 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntfucA and fucP are separated by 546 nucleotidesfucP and fucI are separated by 32 nucleotides b2800: fucA - L-fuculose phosphate aldolase (NCBI), at 2,931,063 to 2,931,710 fucA b2801: fucP - L-fucose transporter (NCBI), at 2,932,257 to 2,933,573 fucP b2802: fucI - L-fucose isomerase (NCBI), at 2,933,606 to 2,935,381 fucI Position (kb) 2932 2933 2934Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2931.349 kb on - strand, within fucAat 2931.349 kb on - strand, within fucAat 2931.381 kb on + strand, within fucAat 2931.435 kb on - strand, within fucAat 2931.489 kb on - strand, within fucAat 2931.528 kb on + strand, within fucAat 2931.528 kb on + strand, within fucAat 2931.549 kb on + strand, within fucAat 2931.596 kb on + strand, within fucAat 2931.602 kb on - strand, within fucAat 2931.602 kb on - strand, within fucAat 2931.606 kb on - strand, within fucAat 2931.606 kb on - strand, within fucAat 2931.606 kb on - strand, within fucAat 2931.611 kb on + strand, within fucAat 2931.611 kb on + strand, within fucAat 2931.611 kb on + strand, within fucAat 2931.613 kb on + strand, within fucAat 2931.613 kb on + strand, within fucAat 2931.621 kb on + strand, within fucAat 2931.637 kb on + strand, within fucAat 2931.644 kb on - strand, within fucAat 2931.644 kb on - strand, within fucAat 2931.645 kb on - strand, within fucAat 2931.650 kb on - strandat 2931.650 kb on - strandat 2931.655 kb on - strandat 2931.673 kb on + strandat 2931.694 kb on + strandat 2931.694 kb on + strandat 2931.707 kb on + strandat 2931.711 kb on + strandat 2931.711 kb on + strandat 2931.711 kb on - strandat 2931.735 kb on - strandat 2931.735 kb on - strandat 2931.735 kb on - strandat 2931.748 kb on - strandat 2931.753 kb on + strandat 2931.762 kb on + strandat 2931.762 kb on + strandat 2931.764 kb on + strandat 2932.062 kb on - strandat 2932.091 kb on - strandat 2932.092 kb on - strandat 2932.099 kb on - strandat 2932.277 kb on + strandat 2932.638 kb on - strand, within fucPat 2932.652 kb on - strand, within fucPat 2932.652 kb on - strand, within fucPat 2932.652 kb on - strand, within fucPat 2932.696 kb on - strand, within fucPat 2932.816 kb on - strand, within fucPat 2932.816 kb on - strand, within fucPat 2932.823 kb on + strand, within fucPat 2932.844 kb on + strand, within fucPat 2932.847 kb on - strand, within fucPat 2932.847 kb on - strand, within fucPat 2932.852 kb on - strand, within fucPat 2932.862 kb on - strand, within fucPat 2932.866 kb on - strand, within fucPat 2932.866 kb on - strand, within fucPat 2932.873 kb on - strand, within fucPat 2932.873 kb on - strand, within fucPat 2932.878 kb on + strand, within fucPat 2932.878 kb on + strand, within fucPat 2932.886 kb on - strand, within fucPat 2932.890 kb on + strand, within fucPat 2932.890 kb on + strand, within fucPat 2932.896 kb on + strand, within fucPat 2932.899 kb on + strand, within fucPat 2932.906 kb on - strand, within fucPat 2932.906 kb on - strand, within fucPat 2932.910 kb on + strand, within fucPat 2932.911 kb on + strand, within fucPat 2932.911 kb on - strand, within fucPat 2932.911 kb on - strand, within fucPat 2932.912 kb on + strand, within fucPat 2932.912 kb on + strand, within fucPat 2932.917 kb on - strand, within fucPat 2932.917 kb on - strand, within fucPat 2932.921 kb on + strand, within fucPat 2932.939 kb on + strand, within fucPat 2932.954 kb on - strand, within fucPat 2932.994 kb on + strand, within fucPat 2933.076 kb on + strand, within fucPat 2933.110 kb on - strand, within fucPat 2933.112 kb on - strand, within fucPat 2933.142 kb on - strand, within fucPat 2933.260 kb on + strand, within fucPat 2933.260 kb on + strand, within fucPat 2933.260 kb on + strand, within fucPat 2933.268 kb on - strand, within fucPat 2933.268 kb on - strand, within fucPat 2933.268 kb on - strand, within fucPat 2933.348 kb on + strand, within fucPat 2933.348 kb on + strand, within fucPat 2933.358 kb on - strand, within fucPat 2933.409 kb on + strand, within fucPat 2933.461 kb on - strandat 2933.461 kb on - strandat 2933.659 kb on + strandat 2933.659 kb on + strandat 2933.743 kb on - strandat 2933.859 kb on + strand, within fucIat 2933.859 kb on + strand, within fucIat 2933.911 kb on - strand, within fucIat 2933.911 kb on - strand, within fucIat 2933.915 kb on - strand, within fucIat 2933.968 kb on - strand, within fucIat 2934.139 kb on + strand, within fucIat 2934.298 kb on + strand, within fucIat 2934.306 kb on - strand, within fucIat 2934.306 kb on - strand, within fucIat 2934.380 kb on + strand, within fucIat 2934.388 kb on - strand, within fucIat 2934.397 kb on + strand, within fucIat 2934.514 kb on + strand, within fucIat 2934.522 kb on - strand, within fucIat 2934.533 kb on - strand, within fucIat 2934.536 kb on + strand, within fucIat 2934.536 kb on + strand, within fucIat 2934.546 kb on - strand, within fucIat 2934.546 kb on - strand, within fucIat 2934.554 kb on - strand, within fucIat 2934.565 kb on - strand, within fucIat 2934.565 kb on - strand, within fucIat 2934.565 kb on - strand, within fucIat 2934.565 kb on - strand, within fucI

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Per-strain Table

Position Strand Gene LocusTag Fraction LB Anaerobic with Benzethonium chloride 0.00003125 mM
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2,931,349 - fucA b2800 0.44 -2.1
2,931,349 - fucA b2800 0.44 +0.1
2,931,381 + fucA b2800 0.49 +1.2
2,931,435 - fucA b2800 0.57 +0.7
2,931,489 - fucA b2800 0.66 +2.6
2,931,528 + fucA b2800 0.72 +0.2
2,931,528 + fucA b2800 0.72 -2.3
2,931,549 + fucA b2800 0.75 -1.4
2,931,596 + fucA b2800 0.82 +0.2
2,931,602 - fucA b2800 0.83 +0.9
2,931,602 - fucA b2800 0.83 -0.8
2,931,606 - fucA b2800 0.84 -2.1
2,931,606 - fucA b2800 0.84 -0.2
2,931,606 - fucA b2800 0.84 -0.1
2,931,611 + fucA b2800 0.85 -1.9
2,931,611 + fucA b2800 0.85 -0.8
2,931,611 + fucA b2800 0.85 -0.4
2,931,613 + fucA b2800 0.85 +1.0
2,931,613 + fucA b2800 0.85 -0.1
2,931,621 + fucA b2800 0.86 -2.0
2,931,637 + fucA b2800 0.89 -0.0
2,931,644 - fucA b2800 0.90 +0.2
2,931,644 - fucA b2800 0.90 -1.6
2,931,645 - fucA b2800 0.90 +1.2
2,931,650 - +2.2
2,931,650 - -0.4
2,931,655 - +1.2
2,931,673 + +0.2
2,931,694 + -0.8
2,931,694 + -0.4
2,931,707 + +1.6
2,931,711 + +1.2
2,931,711 + +1.2
2,931,711 - +1.2
2,931,735 - -2.0
2,931,735 - -1.8
2,931,735 - +1.2
2,931,748 - -1.4
2,931,753 + +2.1
2,931,762 + -2.7
2,931,762 + -0.8
2,931,764 + -0.8
2,932,062 - +1.7
2,932,091 - +1.4
2,932,092 - -1.3
2,932,099 - -1.1
2,932,277 + +1.2
2,932,638 - fucP b2801 0.29 -3.3
2,932,652 - fucP b2801 0.30 +0.4
2,932,652 - fucP b2801 0.30 -1.1
2,932,652 - fucP b2801 0.30 +1.4
2,932,696 - fucP b2801 0.33 -1.1
2,932,816 - fucP b2801 0.42 +1.7
2,932,816 - fucP b2801 0.42 -1.4
2,932,823 + fucP b2801 0.43 +0.2
2,932,844 + fucP b2801 0.45 +0.2
2,932,847 - fucP b2801 0.45 +1.4
2,932,847 - fucP b2801 0.45 +1.2
2,932,852 - fucP b2801 0.45 +2.1
2,932,862 - fucP b2801 0.46 +1.9
2,932,866 - fucP b2801 0.46 +2.7
2,932,866 - fucP b2801 0.46 +0.9
2,932,873 - fucP b2801 0.47 -0.8
2,932,873 - fucP b2801 0.47 -1.1
2,932,878 + fucP b2801 0.47 -2.3
2,932,878 + fucP b2801 0.47 -2.9
2,932,886 - fucP b2801 0.48 -2.1
2,932,890 + fucP b2801 0.48 +0.2
2,932,890 + fucP b2801 0.48 -2.0
2,932,896 + fucP b2801 0.49 -2.5
2,932,899 + fucP b2801 0.49 -2.5
2,932,906 - fucP b2801 0.49 -0.8
2,932,906 - fucP b2801 0.49 +0.5
2,932,910 + fucP b2801 0.50 +1.1
2,932,911 + fucP b2801 0.50 -2.5
2,932,911 - fucP b2801 0.50 +0.2
2,932,911 - fucP b2801 0.50 -0.5
2,932,912 + fucP b2801 0.50 -0.8
2,932,912 + fucP b2801 0.50 -1.4
2,932,917 - fucP b2801 0.50 +0.2
2,932,917 - fucP b2801 0.50 +0.2
2,932,921 + fucP b2801 0.50 -0.5
2,932,939 + fucP b2801 0.52 +1.8
2,932,954 - fucP b2801 0.53 -0.2
2,932,994 + fucP b2801 0.56 +0.0
2,933,076 + fucP b2801 0.62 -1.6
2,933,110 - fucP b2801 0.65 -0.6
2,933,112 - fucP b2801 0.65 -3.7
2,933,142 - fucP b2801 0.67 +0.6
2,933,260 + fucP b2801 0.76 -0.5
2,933,260 + fucP b2801 0.76 -2.1
2,933,260 + fucP b2801 0.76 +0.3
2,933,268 - fucP b2801 0.77 +0.8
2,933,268 - fucP b2801 0.77 -1.1
2,933,268 - fucP b2801 0.77 +1.7
2,933,348 + fucP b2801 0.83 -0.7
2,933,348 + fucP b2801 0.83 +0.6
2,933,358 - fucP b2801 0.84 +1.1
2,933,409 + fucP b2801 0.87 +1.3
2,933,461 - +2.8
2,933,461 - +0.2
2,933,659 + +2.5
2,933,659 + -0.3
2,933,743 - +2.5
2,933,859 + fucI b2802 0.14 -1.1
2,933,859 + fucI b2802 0.14 +0.4
2,933,911 - fucI b2802 0.17 -1.8
2,933,911 - fucI b2802 0.17 +0.0
2,933,915 - fucI b2802 0.17 +2.2
2,933,968 - fucI b2802 0.20 -2.5
2,934,139 + fucI b2802 0.30 +0.6
2,934,298 + fucI b2802 0.39 -0.2
2,934,306 - fucI b2802 0.39 -0.7
2,934,306 - fucI b2802 0.39 +0.8
2,934,380 + fucI b2802 0.44 -1.2
2,934,388 - fucI b2802 0.44 -3.0
2,934,397 + fucI b2802 0.45 +0.5
2,934,514 + fucI b2802 0.51 -4.1
2,934,522 - fucI b2802 0.52 +0.6
2,934,533 - fucI b2802 0.52 +0.9
2,934,536 + fucI b2802 0.52 -1.8
2,934,536 + fucI b2802 0.52 +1.2
2,934,546 - fucI b2802 0.53 +2.2
2,934,546 - fucI b2802 0.53 +0.0
2,934,554 - fucI b2802 0.53 +1.3
2,934,565 - fucI b2802 0.54 +3.4
2,934,565 - fucI b2802 0.54 -0.4
2,934,565 - fucI b2802 0.54 -1.6
2,934,565 - fucI b2802 0.54 +0.5

Or see this region's nucleotide sequence