Strain Fitness in Escherichia coli BW25113 around b2066

Experiment: LB Anaerobic with 8-hydroxy-nitroquinoline 0.00000125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB Anaerobic with 8-hydroxy-nitroquinoline 0.00000125 mM
2,139,366	-	asmA	b2064	0.85	-1.0
2,139,390	-	asmA	b2064	0.87	-0.5
2,139,416	-	asmA	b2064	0.88	-0.3
2,139,457	-				-2.5
2,139,457	-				-0.8
2,139,516	-				+0.1
2,139,521	-				+0.3
2,139,521	-				-1.4
2,139,530	+				+0.3
2,139,574	+				+1.3
2,139,574	+				-0.0
2,139,640	+				-1.3
2,140,303	+				+0.3
2,140,303	+				-0.9
2,140,303	+				+0.2
2,140,311	-				+0.5
2,140,363	+				-0.1
2,140,494	-				-1.7
2,140,494	-	udk	b2066	0.25	+0.5
2,140,505	+	udk	b2066	0.27	-0.4
2,140,640	-	udk	b2066	0.48	+0.3
2,140,769	-	udk	b2066	0.68	-0.8
2,140,772	+	udk	b2066	0.69	-0.1
2,140,772	+	udk	b2066	0.69	+0.3
2,140,819	-	udk	b2066	0.76	-0.7
2,140,819	-	udk	b2066	0.76	-0.1
2,140,848	-	udk	b2066	0.81	-0.1
2,140,861	-	udk	b2066	0.83	-0.0
2,140,906	-	udk	b2066	0.90	+0.9
2,140,940	+				+1.4
2,140,952	-				-0.5
2,140,968	+				-0.5
2,140,976	-				-0.3
2,140,995	-				+0.7
2,141,000	+				-0.7
2,141,007	-				+0.4
2,141,245	-				-0.3
2,141,265	+				-0.3
2,141,351	+				+0.9
2,141,403	+				+1.1
2,141,403	+				+0.3
2,141,430	-				+0.5
2,141,435	-				-1.9
2,141,435	-				-0.4
2,141,595	+				+0.1
2,141,608	-				+0.3
2,141,608	-				+0.2
2,141,631	+	yegE	b2067	0.10	+1.2
2,141,631	+	yegE	b2067	0.10	+0.3
2,141,631	+	yegE	b2067	0.10	-0.1
2,141,631	+	yegE	b2067	0.10	-0.4
2,141,639	-	yegE	b2067	0.11	+0.3
2,141,639	-	yegE	b2067	0.11	-0.5
2,141,639	-	yegE	b2067	0.11	+0.4