Strain Fitness in Escherichia coli BW25113 around b1092

Experiment: LB Anaerobic with Irgasan 0.000000625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntfabH and fabD are separated by 15 nucleotidesfabD and fabG are separated by 12 nucleotidesfabG and acpP are separated by 210 nucleotides b1091: fabH - 3-oxoacyl-(acyl carrier protein) synthase (NCBI), at 1,147,982 to 1,148,935 fabH b1092: fabD - acyl carrier protein S-malonyltransferase (NCBI), at 1,148,951 to 1,149,880 fabD b1093: fabG - 3-oxoacyl-[acyl-carrier-protein] reductase (NCBI), at 1,149,893 to 1,150,627 fabG b1094: acpP - acyl carrier protein (NCBI), at 1,150,838 to 1,151,074 acpP Position (kb) 1148 1149 1150Strain fitness (log2 ratio) -1 0 1at 1147.981 kb on + strandat 1149.875 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB Anaerobic with Irgasan 0.000000625 mM
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1,147,981 + +0.3
1,149,875 + -1.4

Or see this region's nucleotide sequence