Experiment: survival 4C, 24 hrs
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LU632_RS23550 and LU632_RS23555 are separated by 258 nucleotides LU632_RS23555 and LU632_RS23560 are separated by 51 nucleotides
LU632_RS23550: LU632_RS23550 - cytochrome P450, at 4,492,180 to 4,493,493
_RS23550
LU632_RS23555: LU632_RS23555 - polyprenyl synthetase family protein, at 4,493,752 to 4,494,624
_RS23555
LU632_RS23560: LU632_RS23560 - hypothetical protein, at 4,494,676 to 4,496,247
_RS23560
Position (kb) 4493
4494
4495 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4492.766 kb on - strand, within LU632_RS23550 at 4493.416 kb on + strand at 4493.416 kb on + strand at 4493.601 kb on + strand at 4493.601 kb on + strand at 4493.601 kb on + strand at 4493.601 kb on + strand at 4493.602 kb on - strand at 4493.650 kb on - strand at 4493.730 kb on + strand at 4493.747 kb on + strand at 4493.747 kb on + strand at 4493.865 kb on + strand, within LU632_RS23555 at 4494.011 kb on + strand, within LU632_RS23555 at 4494.012 kb on - strand, within LU632_RS23555 at 4494.035 kb on + strand, within LU632_RS23555 at 4494.103 kb on - strand, within LU632_RS23555 at 4494.203 kb on + strand, within LU632_RS23555 at 4494.249 kb on - strand, within LU632_RS23555 at 4494.347 kb on - strand, within LU632_RS23555 at 4494.697 kb on - strand at 4494.763 kb on + strand at 4494.818 kb on + strand at 4494.819 kb on - strand at 4494.819 kb on - strand at 4494.819 kb on - strand at 4494.819 kb on - strand at 4494.821 kb on - strand at 4494.903 kb on - strand, within LU632_RS23560 at 4494.912 kb on - strand, within LU632_RS23560 at 4494.979 kb on + strand, within LU632_RS23560 at 4494.980 kb on - strand, within LU632_RS23560 at 4495.001 kb on + strand, within LU632_RS23560 at 4495.001 kb on + strand, within LU632_RS23560 at 4495.001 kb on + strand, within LU632_RS23560 at 4495.002 kb on - strand, within LU632_RS23560 at 4495.002 kb on - strand, within LU632_RS23560 at 4495.002 kb on - strand, within LU632_RS23560 at 4495.002 kb on - strand, within LU632_RS23560 at 4495.003 kb on + strand, within LU632_RS23560 at 4495.004 kb on - strand, within LU632_RS23560 at 4495.061 kb on + strand, within LU632_RS23560 at 4495.061 kb on + strand, within LU632_RS23560 at 4495.121 kb on - strand, within LU632_RS23560 at 4495.241 kb on + strand, within LU632_RS23560 at 4495.339 kb on + strand, within LU632_RS23560 at 4495.343 kb on + strand, within LU632_RS23560 at 4495.343 kb on + strand, within LU632_RS23560 at 4495.344 kb on - strand, within LU632_RS23560 at 4495.344 kb on - strand, within LU632_RS23560
Per-strain Table
Position Strand Gene LocusTag Fraction survival 4C, 24 hrs remove 4,492,766 - LU632_RS23550 0.45 +0.3 4,493,416 + -0.1 4,493,416 + -2.5 4,493,601 + +1.1 4,493,601 + -0.6 4,493,601 + -0.1 4,493,601 + +0.4 4,493,602 - -1.1 4,493,650 - +0.1 4,493,730 + +0.0 4,493,747 + -1.4 4,493,747 + +0.8 4,493,865 + LU632_RS23555 0.13 +0.5 4,494,011 + LU632_RS23555 0.30 +0.6 4,494,012 - LU632_RS23555 0.30 -1.7 4,494,035 + LU632_RS23555 0.32 +1.9 4,494,103 - LU632_RS23555 0.40 +0.2 4,494,203 + LU632_RS23555 0.52 +0.4 4,494,249 - LU632_RS23555 0.57 +0.9 4,494,347 - LU632_RS23555 0.68 +0.3 4,494,697 - -0.1 4,494,763 + +0.3 4,494,818 + +0.9 4,494,819 - +2.1 4,494,819 - +0.1 4,494,819 - +0.6 4,494,819 - -0.4 4,494,821 - +0.9 4,494,903 - LU632_RS23560 0.14 -0.7 4,494,912 - LU632_RS23560 0.15 -1.1 4,494,979 + LU632_RS23560 0.19 +0.1 4,494,980 - LU632_RS23560 0.19 +1.9 4,495,001 + LU632_RS23560 0.21 +0.3 4,495,001 + LU632_RS23560 0.21 +0.1 4,495,001 + LU632_RS23560 0.21 -0.7 4,495,002 - LU632_RS23560 0.21 -0.3 4,495,002 - LU632_RS23560 0.21 +0.9 4,495,002 - LU632_RS23560 0.21 +0.6 4,495,002 - LU632_RS23560 0.21 +0.4 4,495,003 + LU632_RS23560 0.21 +0.5 4,495,004 - LU632_RS23560 0.21 +0.7 4,495,061 + LU632_RS23560 0.24 -1.1 4,495,061 + LU632_RS23560 0.24 +0.2 4,495,121 - LU632_RS23560 0.28 -0.5 4,495,241 + LU632_RS23560 0.36 +0.3 4,495,339 + LU632_RS23560 0.42 +0.9 4,495,343 + LU632_RS23560 0.42 +1.2 4,495,343 + LU632_RS23560 0.42 -0.8 4,495,344 - LU632_RS23560 0.42 -0.4 4,495,344 - LU632_RS23560 0.42 +0.1
Or see this region's nucleotide sequence