Experiment: survival 4C, 24 hrs
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yceG and pabC are separated by 11 nucleotides pabC and fabF are separated by 236 nucleotides
LU632_RS14800: yceG - cell division protein YceG, at 2,813,008 to 2,814,027
yceG
LU632_RS14805: pabC - aminodeoxychorismate lyase, at 2,814,039 to 2,814,833
pabC
LU632_RS14810: fabF - beta-ketoacyl-ACP synthase II, at 2,815,070 to 2,816,311
fabF
Position (kb)
2814
2815 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2813.118 kb on - strand, within yceG at 2813.427 kb on - strand, within yceG at 2813.497 kb on - strand, within yceG at 2813.535 kb on - strand, within yceG at 2813.535 kb on - strand, within yceG at 2813.535 kb on - strand, within yceG at 2813.608 kb on - strand, within yceG at 2813.630 kb on - strand, within yceG at 2813.752 kb on - strand, within yceG at 2814.163 kb on - strand, within pabC at 2814.214 kb on - strand, within pabC at 2814.214 kb on - strand, within pabC at 2814.214 kb on - strand, within pabC at 2814.214 kb on - strand, within pabC at 2814.214 kb on - strand, within pabC at 2814.219 kb on - strand, within pabC at 2814.247 kb on - strand, within pabC at 2814.301 kb on - strand, within pabC at 2814.301 kb on - strand, within pabC at 2814.330 kb on - strand, within pabC at 2814.529 kb on - strand, within pabC at 2814.633 kb on - strand, within pabC at 2814.781 kb on - strand at 2814.944 kb on + strand at 2814.944 kb on + strand at 2814.945 kb on - strand at 2814.945 kb on - strand at 2814.945 kb on - strand at 2815.134 kb on + strand at 2815.135 kb on - strand at 2815.238 kb on + strand, within fabF at 2815.239 kb on - strand, within fabF at 2815.300 kb on + strand, within fabF at 2815.301 kb on - strand, within fabF at 2815.397 kb on - strand, within fabF at 2815.505 kb on - strand, within fabF at 2815.509 kb on + strand, within fabF at 2815.676 kb on - strand, within fabF at 2815.681 kb on + strand, within fabF at 2815.726 kb on + strand, within fabF at 2815.727 kb on - strand, within fabF at 2815.727 kb on - strand, within fabF at 2815.730 kb on - strand, within fabF at 2815.804 kb on + strand, within fabF
Per-strain Table
Position Strand Gene LocusTag Fraction survival 4C, 24 hrs remove 2,813,118 - yceG LU632_RS14800 0.11 +1.1 2,813,427 - yceG LU632_RS14800 0.41 +0.9 2,813,497 - yceG LU632_RS14800 0.48 +0.4 2,813,535 - yceG LU632_RS14800 0.52 +1.6 2,813,535 - yceG LU632_RS14800 0.52 +0.2 2,813,535 - yceG LU632_RS14800 0.52 -0.3 2,813,608 - yceG LU632_RS14800 0.59 -0.0 2,813,630 - yceG LU632_RS14800 0.61 +0.4 2,813,752 - yceG LU632_RS14800 0.73 +1.0 2,814,163 - pabC LU632_RS14805 0.16 +0.4 2,814,214 - pabC LU632_RS14805 0.22 -0.3 2,814,214 - pabC LU632_RS14805 0.22 +2.5 2,814,214 - pabC LU632_RS14805 0.22 -0.2 2,814,214 - pabC LU632_RS14805 0.22 +0.2 2,814,214 - pabC LU632_RS14805 0.22 +0.5 2,814,219 - pabC LU632_RS14805 0.23 +2.0 2,814,247 - pabC LU632_RS14805 0.26 -1.3 2,814,301 - pabC LU632_RS14805 0.33 +0.9 2,814,301 - pabC LU632_RS14805 0.33 +0.7 2,814,330 - pabC LU632_RS14805 0.37 -0.3 2,814,529 - pabC LU632_RS14805 0.62 +0.9 2,814,633 - pabC LU632_RS14805 0.75 +0.9 2,814,781 - -2.6 2,814,944 + -0.3 2,814,944 + +0.9 2,814,945 - -0.3 2,814,945 - +0.0 2,814,945 - +0.0 2,815,134 + -0.9 2,815,135 - -0.6 2,815,238 + fabF LU632_RS14810 0.14 -1.3 2,815,239 - fabF LU632_RS14810 0.14 -1.3 2,815,300 + fabF LU632_RS14810 0.19 -0.3 2,815,301 - fabF LU632_RS14810 0.19 -0.1 2,815,397 - fabF LU632_RS14810 0.26 -1.2 2,815,505 - fabF LU632_RS14810 0.35 +2.7 2,815,509 + fabF LU632_RS14810 0.35 +0.8 2,815,676 - fabF LU632_RS14810 0.49 +0.0 2,815,681 + fabF LU632_RS14810 0.49 +0.8 2,815,726 + fabF LU632_RS14810 0.53 -0.3 2,815,727 - fabF LU632_RS14810 0.53 -0.3 2,815,727 - fabF LU632_RS14810 0.53 +0.0 2,815,730 - fabF LU632_RS14810 0.53 +0.7 2,815,804 + fabF LU632_RS14810 0.59 -0.0
Or see this region's nucleotide sequence