Experiment: survival 4C, 24 hrs
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LU632_RS03615 and LU632_RS03620 are separated by 68 nucleotides LU632_RS03620 and LU632_RS03625 overlap by 4 nucleotides LU632_RS03625 and LU632_RS03630 are separated by 6 nucleotides LU632_RS03630 and LU632_RS03635 overlap by 8 nucleotides
LU632_RS03615: LU632_RS03615 - phage virion morphogenesis protein, at 727,017 to 727,466
_RS03615
LU632_RS03620: LU632_RS03620 - phage baseplate assembly protein V, at 727,535 to 728,170
_RS03620
LU632_RS03625: LU632_RS03625 - GPW/gp25 family protein, at 728,167 to 728,514
_RS03625
LU632_RS03630: LU632_RS03630 - baseplate assembly protein, at 728,521 to 729,429
_RS03630
LU632_RS03635: LU632_RS03635 - phage tail protein I, at 729,422 to 730,030
_RS03635
Position (kb) 728
729 Strain fitness (log2 ratio) -1
0
1
2 at 727.260 kb on - strand, within LU632_RS03615 at 727.400 kb on - strand, within LU632_RS03615 at 727.468 kb on + strand at 727.468 kb on + strand at 727.469 kb on - strand at 727.534 kb on + strand at 727.540 kb on + strand at 727.541 kb on - strand at 727.541 kb on - strand at 727.541 kb on - strand at 727.541 kb on - strand at 727.541 kb on - strand at 727.546 kb on - strand at 727.660 kb on + strand, within LU632_RS03620 at 727.660 kb on + strand, within LU632_RS03620 at 727.660 kb on + strand, within LU632_RS03620 at 727.660 kb on + strand, within LU632_RS03620 at 727.869 kb on - strand, within LU632_RS03620 at 727.893 kb on + strand, within LU632_RS03620 at 728.101 kb on + strand, within LU632_RS03620 at 728.229 kb on + strand, within LU632_RS03625 at 728.230 kb on - strand, within LU632_RS03625 at 728.322 kb on + strand, within LU632_RS03625 at 728.322 kb on + strand, within LU632_RS03625 at 728.323 kb on - strand, within LU632_RS03625 at 728.406 kb on + strand, within LU632_RS03625 at 728.406 kb on + strand, within LU632_RS03625 at 728.406 kb on + strand, within LU632_RS03625 at 728.406 kb on + strand, within LU632_RS03625 at 728.407 kb on + strand, within LU632_RS03625 at 728.407 kb on - strand, within LU632_RS03625 at 728.446 kb on + strand, within LU632_RS03625 at 728.446 kb on + strand, within LU632_RS03625 at 728.446 kb on + strand, within LU632_RS03625 at 728.447 kb on - strand, within LU632_RS03625 at 728.447 kb on - strand, within LU632_RS03625 at 728.447 kb on - strand, within LU632_RS03625 at 728.470 kb on - strand, within LU632_RS03625 at 728.512 kb on + strand at 728.719 kb on - strand, within LU632_RS03630 at 729.030 kb on + strand, within LU632_RS03630 at 729.090 kb on + strand, within LU632_RS03630 at 729.247 kb on + strand, within LU632_RS03630 at 729.369 kb on + strand at 729.397 kb on + strand at 729.404 kb on + strand at 729.405 kb on - strand at 729.408 kb on + strand at 729.409 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction survival 4C, 24 hrs remove 727,260 - LU632_RS03615 0.54 +1.6 727,400 - LU632_RS03615 0.85 +0.1 727,468 + -0.5 727,468 + -0.1 727,469 - +1.4 727,534 + -0.4 727,540 + +0.2 727,541 - -1.2 727,541 - +1.4 727,541 - -0.8 727,541 - +0.4 727,541 - -0.9 727,546 - +2.1 727,660 + LU632_RS03620 0.20 -0.7 727,660 + LU632_RS03620 0.20 +0.5 727,660 + LU632_RS03620 0.20 +0.4 727,660 + LU632_RS03620 0.20 +0.2 727,869 - LU632_RS03620 0.53 +0.1 727,893 + LU632_RS03620 0.56 +1.7 728,101 + LU632_RS03620 0.89 -0.5 728,229 + LU632_RS03625 0.18 -0.2 728,230 - LU632_RS03625 0.18 -1.2 728,322 + LU632_RS03625 0.45 -0.2 728,322 + LU632_RS03625 0.45 -0.8 728,323 - LU632_RS03625 0.45 -0.2 728,406 + LU632_RS03625 0.69 -0.6 728,406 + LU632_RS03625 0.69 -1.2 728,406 + LU632_RS03625 0.69 -0.2 728,406 + LU632_RS03625 0.69 -0.5 728,407 + LU632_RS03625 0.69 -0.4 728,407 - LU632_RS03625 0.69 -0.2 728,446 + LU632_RS03625 0.80 +0.5 728,446 + LU632_RS03625 0.80 -0.0 728,446 + LU632_RS03625 0.80 -0.8 728,447 - LU632_RS03625 0.80 +1.8 728,447 - LU632_RS03625 0.80 -0.2 728,447 - LU632_RS03625 0.80 -0.7 728,470 - LU632_RS03625 0.87 -0.7 728,512 + +0.8 728,719 - LU632_RS03630 0.22 -1.0 729,030 + LU632_RS03630 0.56 -0.2 729,090 + LU632_RS03630 0.63 -0.2 729,247 + LU632_RS03630 0.80 +0.5 729,369 + -0.5 729,397 + -1.2 729,404 + +0.5 729,405 - -0.5 729,408 + +1.5 729,409 - -1.0
Or see this region's nucleotide sequence