Experiment: rich media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LU632_RS22955 and feoA are separated by 146 nucleotides feoA and feoB are separated by 13 nucleotides
LU632_RS22955: LU632_RS22955 - RNA-binding transcriptional accessory protein, at 4,372,477 to 4,374,795
_RS22955
LU632_RS22960: feoA - ferrous iron transporter A, at 4,374,942 to 4,375,166
feoA
LU632_RS22965: feoB - Fe(2+) transporter permease subunit FeoB, at 4,375,180 to 4,377,480
feoB
Position (kb) 4374
4375
4376 Strain fitness (log2 ratio) -2
-1
0
1 at 4374.034 kb on - strand, within LU632_RS22955 at 4374.034 kb on - strand, within LU632_RS22955 at 4374.034 kb on - strand, within LU632_RS22955 at 4374.142 kb on - strand, within LU632_RS22955 at 4374.144 kb on + strand, within LU632_RS22955 at 4374.144 kb on + strand, within LU632_RS22955 at 4374.459 kb on - strand, within LU632_RS22955 at 4374.459 kb on - strand, within LU632_RS22955 at 4374.510 kb on - strand, within LU632_RS22955 at 4374.513 kb on + strand, within LU632_RS22955 at 4374.513 kb on + strand, within LU632_RS22955 at 4374.514 kb on - strand, within LU632_RS22955 at 4374.514 kb on - strand, within LU632_RS22955 at 4374.553 kb on - strand, within LU632_RS22955 at 4374.843 kb on + strand at 4374.868 kb on + strand at 4374.937 kb on + strand at 4374.938 kb on - strand at 4374.938 kb on - strand at 4374.941 kb on + strand at 4374.941 kb on + strand at 4374.941 kb on + strand at 4374.950 kb on + strand at 4374.951 kb on - strand at 4374.963 kb on + strand at 4374.963 kb on + strand at 4374.967 kb on - strand, within feoA at 4375.177 kb on - strand at 4375.177 kb on - strand at 4375.179 kb on + strand at 4375.179 kb on + strand at 4375.203 kb on - strand at 4375.299 kb on + strand at 4375.360 kb on + strand at 4375.407 kb on + strand at 4375.422 kb on - strand, within feoB at 4375.480 kb on - strand, within feoB at 4375.486 kb on + strand, within feoB at 4375.539 kb on + strand, within feoB at 4375.540 kb on - strand, within feoB at 4375.566 kb on + strand, within feoB at 4375.567 kb on - strand, within feoB at 4375.614 kb on + strand, within feoB at 4375.925 kb on + strand, within feoB at 4375.926 kb on - strand, within feoB at 4376.038 kb on + strand, within feoB at 4376.039 kb on - strand, within feoB at 4376.039 kb on - strand, within feoB at 4376.042 kb on + strand, within feoB at 4376.043 kb on - strand, within feoB at 4376.062 kb on - strand, within feoB
Per-strain Table
Position Strand Gene LocusTag Fraction rich media remove 4,374,034 - LU632_RS22955 0.67 +0.5 4,374,034 - LU632_RS22955 0.67 -1.3 4,374,034 - LU632_RS22955 0.67 +1.0 4,374,142 - LU632_RS22955 0.72 -0.0 4,374,144 + LU632_RS22955 0.72 +1.3 4,374,144 + LU632_RS22955 0.72 +1.3 4,374,459 - LU632_RS22955 0.85 -1.3 4,374,459 - LU632_RS22955 0.85 -0.6 4,374,510 - LU632_RS22955 0.88 -0.3 4,374,513 + LU632_RS22955 0.88 -0.3 4,374,513 + LU632_RS22955 0.88 -0.3 4,374,514 - LU632_RS22955 0.88 +0.8 4,374,514 - LU632_RS22955 0.88 -2.6 4,374,553 - LU632_RS22955 0.90 +0.8 4,374,843 + +0.1 4,374,868 + -0.6 4,374,937 + -0.7 4,374,938 - -0.3 4,374,938 - -0.3 4,374,941 + -1.3 4,374,941 + -0.3 4,374,941 + +0.6 4,374,950 + -0.4 4,374,951 - -1.3 4,374,963 + +0.4 4,374,963 + +0.2 4,374,967 - feoA LU632_RS22960 0.11 -0.5 4,375,177 - -0.3 4,375,177 - -0.3 4,375,179 + +1.7 4,375,179 + -0.4 4,375,203 - +0.9 4,375,299 + -1.9 4,375,360 + -0.3 4,375,407 + -0.3 4,375,422 - feoB LU632_RS22965 0.11 -0.3 4,375,480 - feoB LU632_RS22965 0.13 +0.7 4,375,486 + feoB LU632_RS22965 0.13 -0.5 4,375,539 + feoB LU632_RS22965 0.16 -0.4 4,375,540 - feoB LU632_RS22965 0.16 +0.5 4,375,566 + feoB LU632_RS22965 0.17 +0.0 4,375,567 - feoB LU632_RS22965 0.17 -0.3 4,375,614 + feoB LU632_RS22965 0.19 +0.0 4,375,925 + feoB LU632_RS22965 0.32 -0.3 4,375,926 - feoB LU632_RS22965 0.32 -2.3 4,376,038 + feoB LU632_RS22965 0.37 +1.1 4,376,039 - feoB LU632_RS22965 0.37 +1.1 4,376,039 - feoB LU632_RS22965 0.37 +1.3 4,376,042 + feoB LU632_RS22965 0.37 +0.3 4,376,043 - feoB LU632_RS22965 0.38 +1.1 4,376,062 - feoB LU632_RS22965 0.38 +0.6
Or see this region's nucleotide sequence