Strain Fitness in Escherichia coli BL21 around ECD_01569

Experiment: Control_TnJ

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01567 and ECD_01568 are separated by 38 nucleotidesECD_01568 and ECD_01569 overlap by 14 nucleotidesECD_01569 and ECD_01570 are separated by 411 nucleotides ECD_01567: ECD_01567 - putative peptidase, at 1,617,157 to 1,617,978 _01567 ECD_01568: ECD_01568 - multidrug efflux system transporter, at 1,618,017 to 1,618,346 _01568 ECD_01569: ECD_01569 - multidrug efflux system transporter, at 1,618,333 to 1,618,698 _01569 ECD_01570: ECD_01570 - pheromone AI-2 transporter, at 1,619,110 to 1,620,144 _01570 Position (kb) 1618 1619Strain fitness (log2 ratio) -1 0 1at 1617.359 kb on + strand, within ECD_01567at 1617.487 kb on + strand, within ECD_01567at 1617.630 kb on + strand, within ECD_01567at 1619.589 kb on + strand, within ECD_01570

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_TnJ
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1,617,359 + ECD_01567 0.25 +1.6
1,617,487 + ECD_01567 0.40 -1.6
1,617,630 + ECD_01567 0.58 +0.7
1,619,589 + ECD_01570 0.46 +0.8

Or see this region's nucleotide sequence