Strain Fitness in Escherichia coli BL21 around ECD_01470

Experiment: Control_TnJ

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntECD_01469 and ECD_01470 overlap by 1 nucleotides ECD_01469: ECD_01469 - inactivating GltX kinase facilitating persister formation; toxin of HipAB TA pair; autokinase, at 1,548,951 to 1,550,273 _01469 ECD_01470: ECD_01470 - antitoxin of HipAB toxin-antitoxin system, at 1,550,273 to 1,550,539 _01470 Position (kb) 1550 1551Strain fitness (log2 ratio) -1 0 1at 1550.886 kb on - strandat 1550.983 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Control_TnJ
remove
1,550,886 - -0.3
1,550,983 - -0.1

Or see this region's nucleotide sequence