Strain Fitness in Escherichia coli BL21 around ECD_01365

Experiment: Control_TnJ

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01363 and ECD_01364 overlap by 1 nucleotidesECD_01364 and ECD_01365 are separated by 15 nucleotidesECD_01365 and ECD_01366 are separated by 13 nucleotides ECD_01363: ECD_01363 - inner membrane protein, at 1,430,908 to 1,431,513 _01363 ECD_01364: ECD_01364 - putative CDP-diglyceride synthase, at 1,431,513 to 1,432,409 _01364 ECD_01365: ECD_01365 - putative esterase, at 1,432,425 to 1,434,182 _01365 ECD_01366: ECD_01366 - putative phosphatase inner membrane protein, at 1,434,196 to 1,435,488 _01366 Position (kb) 1432 1433 1434 1435Strain fitness (log2 ratio) -2 -1 0 1at 1432.664 kb on + strand, within ECD_01365at 1433.116 kb on - strand, within ECD_01365at 1433.158 kb on + strand, within ECD_01365at 1433.689 kb on + strand, within ECD_01365at 1434.035 kb on + strandat 1434.576 kb on + strand, within ECD_01366at 1434.600 kb on + strand, within ECD_01366at 1434.754 kb on - strand, within ECD_01366at 1434.866 kb on + strand, within ECD_01366at 1434.866 kb on + strand, within ECD_01366at 1434.941 kb on + strand, within ECD_01366

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_TnJ
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1,432,664 + ECD_01365 0.14 -1.1
1,433,116 - ECD_01365 0.39 -2.1
1,433,158 + ECD_01365 0.42 +0.7
1,433,689 + ECD_01365 0.72 -0.1
1,434,035 + -0.5
1,434,576 + ECD_01366 0.29 -0.2
1,434,600 + ECD_01366 0.31 -0.1
1,434,754 - ECD_01366 0.43 +0.2
1,434,866 + ECD_01366 0.52 +0.3
1,434,866 + ECD_01366 0.52 +0.3
1,434,941 + ECD_01366 0.58 -0.5

Or see this region's nucleotide sequence