Strain Fitness in Escherichia coli BL21 around ECD_00805

Experiment: Control_TnJ

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00804 and ECD_00805 overlap by 4 nucleotidesECD_00805 and ECD_00806 are separated by 246 nucleotides ECD_00804: ECD_00804 - soluble aldose sugar dehydrogenase, at 862,661 to 863,776 _00804 ECD_00805: ECD_00805 - glutathione S-transferase, at 863,773 to 864,399 _00805 ECD_00806: ECD_00806 - D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a, at 864,646 to 865,848 _00806 Position (kb) 863 864 865Strain fitness (log2 ratio) -1 0 1at 863.135 kb on + strand, within ECD_00804at 863.196 kb on + strand, within ECD_00804at 863.196 kb on + strand, within ECD_00804at 863.254 kb on + strand, within ECD_00804at 863.255 kb on - strand, within ECD_00804at 863.256 kb on + strand, within ECD_00804at 863.547 kb on - strand, within ECD_00804at 863.549 kb on - strand, within ECD_00804at 863.718 kb on + strandat 863.720 kb on + strandat 863.752 kb on - strandat 863.761 kb on + strandat 863.774 kb on + strandat 864.655 kb on + strandat 864.795 kb on + strand, within ECD_00806at 864.900 kb on + strand, within ECD_00806at 865.056 kb on + strand, within ECD_00806at 865.072 kb on + strand, within ECD_00806

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_TnJ
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863,135 + ECD_00804 0.42 -0.1
863,196 + ECD_00804 0.48 -0.9
863,196 + ECD_00804 0.48 -0.5
863,254 + ECD_00804 0.53 -0.3
863,255 - ECD_00804 0.53 +0.2
863,256 + ECD_00804 0.53 -0.6
863,547 - ECD_00804 0.79 -0.1
863,549 - ECD_00804 0.80 -0.4
863,718 + +1.1
863,720 + -0.1
863,752 - +0.4
863,761 + +0.7
863,774 + -0.6
864,655 + -0.0
864,795 + ECD_00806 0.12 +0.5
864,900 + ECD_00806 0.21 +0.1
865,056 + ECD_00806 0.34 +0.2
865,072 + ECD_00806 0.35 +0.1

Or see this region's nucleotide sequence