Strain Fitness in Escherichia coli BL21 around ECD_03113

Experiment: JK16

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03112 and ECD_03113 are separated by 977 nucleotidesECD_03113 and ECD_03114 are separated by 10 nucleotides ECD_03112: ECD_03112 - putative acryloyl-CoA reductase, at 3,264,640 to 3,265,614 _03112 ECD_03113: ECD_03113 - acetyl CoA carboxylase, BCCP subunit, at 3,266,592 to 3,267,062 _03113 ECD_03114: ECD_03114 - acetyl-CoA carboxylase, biotin carboxylase subunit, at 3,267,073 to 3,268,422 _03114 Position (kb) 3266 3267 3268Strain fitness (log2 ratio) -1 0 1at 3265.608 kb on + strandat 3265.608 kb on + strandat 3265.613 kb on - strandat 3265.631 kb on - strandat 3265.631 kb on - strandat 3265.631 kb on - strandat 3265.631 kb on - strandat 3265.631 kb on - strandat 3265.634 kb on - strandat 3265.661 kb on + strandat 3265.662 kb on - strandat 3265.728 kb on + strandat 3265.730 kb on + strandat 3265.730 kb on + strandat 3265.730 kb on + strandat 3265.730 kb on + strandat 3265.730 kb on + strandat 3265.730 kb on + strandat 3265.731 kb on - strandat 3265.792 kb on - strandat 3265.792 kb on - strandat 3265.807 kb on + strandat 3265.807 kb on + strandat 3265.808 kb on - strandat 3265.834 kb on + strandat 3265.840 kb on + strandat 3265.840 kb on + strandat 3265.879 kb on - strandat 3265.932 kb on - strandat 3265.950 kb on - strandat 3265.989 kb on - strandat 3266.049 kb on + strandat 3266.050 kb on - strandat 3266.084 kb on + strandat 3266.089 kb on + strandat 3266.089 kb on + strandat 3266.089 kb on + strandat 3266.090 kb on - strandat 3266.090 kb on - strandat 3266.109 kb on + strandat 3266.110 kb on - strandat 3266.110 kb on - strandat 3266.162 kb on + strandat 3266.162 kb on + strandat 3266.162 kb on + strandat 3266.162 kb on + strandat 3266.162 kb on + strandat 3266.162 kb on + strandat 3266.167 kb on + strandat 3266.168 kb on - strandat 3266.169 kb on + strandat 3266.227 kb on - strandat 3266.243 kb on + strandat 3266.247 kb on + strandat 3266.247 kb on + strandat 3266.247 kb on + strandat 3266.248 kb on - strandat 3266.265 kb on + strandat 3266.266 kb on - strandat 3266.278 kb on - strandat 3266.286 kb on + strandat 3266.286 kb on + strandat 3266.286 kb on + strandat 3266.290 kb on + strandat 3266.317 kb on + strandat 3266.503 kb on + strandat 3266.532 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction JK16
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3,265,608 + -0.4
3,265,608 + +0.4
3,265,613 - -0.2
3,265,631 - -1.4
3,265,631 - -1.3
3,265,631 - -0.9
3,265,631 - +1.4
3,265,631 - +0.8
3,265,634 - +0.5
3,265,661 + -0.2
3,265,662 - +0.7
3,265,728 + +0.5
3,265,730 + +0.0
3,265,730 + +0.4
3,265,730 + -0.8
3,265,730 + -1.1
3,265,730 + +0.4
3,265,730 + -0.2
3,265,731 - +0.7
3,265,792 - -0.6
3,265,792 - +0.0
3,265,807 + +0.2
3,265,807 + +0.1
3,265,808 - +1.6
3,265,834 + +0.6
3,265,840 + -0.6
3,265,840 + -0.5
3,265,879 - -1.1
3,265,932 - +0.3
3,265,950 - +1.1
3,265,989 - -0.6
3,266,049 + +0.1
3,266,050 - -0.5
3,266,084 + +0.4
3,266,089 + -0.3
3,266,089 + +0.3
3,266,089 + -0.8
3,266,090 - -0.0
3,266,090 - -0.0
3,266,109 + -1.0
3,266,110 - +0.6
3,266,110 - +1.4
3,266,162 + +0.7
3,266,162 + +1.0
3,266,162 + -0.3
3,266,162 + +0.1
3,266,162 + +0.2
3,266,162 + +0.1
3,266,167 + +0.2
3,266,168 - +0.7
3,266,169 + -0.4
3,266,227 - +1.3
3,266,243 + +0.6
3,266,247 + -1.1
3,266,247 + -0.2
3,266,247 + -0.4
3,266,248 - +0.1
3,266,265 + +0.2
3,266,266 - +0.6
3,266,278 - +0.3
3,266,286 + -0.5
3,266,286 + -0.1
3,266,286 + +0.1
3,266,290 + -0.0
3,266,317 + +0.4
3,266,503 + -0.3
3,266,532 + +0.1

Or see this region's nucleotide sequence