Experiment: JK16
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03112 and ECD_03113 are separated by 977 nucleotides ECD_03113 and ECD_03114 are separated by 10 nucleotides
ECD_03112: ECD_03112 - putative acryloyl-CoA reductase, at 3,264,640 to 3,265,614
_03112
ECD_03113: ECD_03113 - acetyl CoA carboxylase, BCCP subunit, at 3,266,592 to 3,267,062
_03113
ECD_03114: ECD_03114 - acetyl-CoA carboxylase, biotin carboxylase subunit, at 3,267,073 to 3,268,422
_03114
Position (kb)
3266
3267
3268 Strain fitness (log2 ratio)
-1
0
1 at 3265.608 kb on + strand at 3265.608 kb on + strand at 3265.613 kb on - strand at 3265.631 kb on - strand at 3265.631 kb on - strand at 3265.631 kb on - strand at 3265.631 kb on - strand at 3265.631 kb on - strand at 3265.634 kb on - strand at 3265.661 kb on + strand at 3265.662 kb on - strand at 3265.728 kb on + strand at 3265.730 kb on + strand at 3265.730 kb on + strand at 3265.730 kb on + strand at 3265.730 kb on + strand at 3265.730 kb on + strand at 3265.730 kb on + strand at 3265.731 kb on - strand at 3265.792 kb on - strand at 3265.792 kb on - strand at 3265.807 kb on + strand at 3265.807 kb on + strand at 3265.808 kb on - strand at 3265.834 kb on + strand at 3265.840 kb on + strand at 3265.840 kb on + strand at 3265.879 kb on - strand at 3265.932 kb on - strand at 3265.950 kb on - strand at 3265.989 kb on - strand at 3266.049 kb on + strand at 3266.050 kb on - strand at 3266.084 kb on + strand at 3266.089 kb on + strand at 3266.089 kb on + strand at 3266.089 kb on + strand at 3266.090 kb on - strand at 3266.090 kb on - strand at 3266.109 kb on + strand at 3266.110 kb on - strand at 3266.110 kb on - strand at 3266.162 kb on + strand at 3266.162 kb on + strand at 3266.162 kb on + strand at 3266.162 kb on + strand at 3266.162 kb on + strand at 3266.162 kb on + strand at 3266.167 kb on + strand at 3266.168 kb on - strand at 3266.169 kb on + strand at 3266.227 kb on - strand at 3266.243 kb on + strand at 3266.247 kb on + strand at 3266.247 kb on + strand at 3266.247 kb on + strand at 3266.248 kb on - strand at 3266.265 kb on + strand at 3266.266 kb on - strand at 3266.278 kb on - strand at 3266.286 kb on + strand at 3266.286 kb on + strand at 3266.286 kb on + strand at 3266.290 kb on + strand at 3266.317 kb on + strand at 3266.503 kb on + strand at 3266.532 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction JK16 remove 3,265,608 + -0.4 3,265,608 + +0.4 3,265,613 - -0.2 3,265,631 - -1.4 3,265,631 - -1.3 3,265,631 - -0.9 3,265,631 - +1.4 3,265,631 - +0.8 3,265,634 - +0.5 3,265,661 + -0.2 3,265,662 - +0.7 3,265,728 + +0.5 3,265,730 + +0.0 3,265,730 + +0.4 3,265,730 + -0.8 3,265,730 + -1.1 3,265,730 + +0.4 3,265,730 + -0.2 3,265,731 - +0.7 3,265,792 - -0.6 3,265,792 - +0.0 3,265,807 + +0.2 3,265,807 + +0.1 3,265,808 - +1.6 3,265,834 + +0.6 3,265,840 + -0.6 3,265,840 + -0.5 3,265,879 - -1.1 3,265,932 - +0.3 3,265,950 - +1.1 3,265,989 - -0.6 3,266,049 + +0.1 3,266,050 - -0.5 3,266,084 + +0.4 3,266,089 + -0.3 3,266,089 + +0.3 3,266,089 + -0.8 3,266,090 - -0.0 3,266,090 - -0.0 3,266,109 + -1.0 3,266,110 - +0.6 3,266,110 - +1.4 3,266,162 + +0.7 3,266,162 + +1.0 3,266,162 + -0.3 3,266,162 + +0.1 3,266,162 + +0.2 3,266,162 + +0.1 3,266,167 + +0.2 3,266,168 - +0.7 3,266,169 + -0.4 3,266,227 - +1.3 3,266,243 + +0.6 3,266,247 + -1.1 3,266,247 + -0.2 3,266,247 + -0.4 3,266,248 - +0.1 3,266,265 + +0.2 3,266,266 - +0.6 3,266,278 - +0.3 3,266,286 + -0.5 3,266,286 + -0.1 3,266,286 + +0.1 3,266,290 + -0.0 3,266,317 + +0.4 3,266,503 + -0.3 3,266,532 + +0.1
Or see this region's nucleotide sequence