Experiment: JK16
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02372 and ECD_02373 are separated by 252 nucleotides ECD_02373 and ECD_02374 overlap by 1 nucleotides
ECD_02372: ECD_02372 - peroxiredoxin; thiol peroxidase, thioredoxin-dependent, at 2,464,967 to 2,465,437
_02372
ECD_02373: ECD_02373 - hydrogenase 4, 4Fe-4S subunit, at 2,465,690 to 2,466,307
_02373
ECD_02374: ECD_02374 - hydrogenase 4, membrane subunit, at 2,466,307 to 2,468,325
_02374
Position (kb)
2466
2467
2468
2469 Strain fitness (log2 ratio)
-2
-1
0
1 at 2465.439 kb on + strand at 2465.440 kb on - strand at 2465.480 kb on + strand at 2465.481 kb on - strand at 2465.481 kb on - strand at 2465.481 kb on - strand at 2465.725 kb on + strand at 2465.734 kb on + strand at 2465.734 kb on + strand at 2465.734 kb on + strand at 2465.734 kb on + strand at 2465.735 kb on - strand at 2465.735 kb on - strand at 2465.735 kb on - strand at 2465.735 kb on - strand at 2465.738 kb on - strand at 2465.767 kb on + strand, within ECD_02373 at 2465.768 kb on - strand, within ECD_02373 at 2466.358 kb on - strand at 2466.400 kb on - strand at 2466.400 kb on - strand at 2466.468 kb on - strand at 2466.468 kb on - strand at 2466.610 kb on + strand, within ECD_02374 at 2467.052 kb on + strand, within ECD_02374 at 2467.053 kb on - strand, within ECD_02374 at 2467.064 kb on + strand, within ECD_02374 at 2467.068 kb on + strand, within ECD_02374 at 2467.181 kb on + strand, within ECD_02374 at 2467.181 kb on + strand, within ECD_02374 at 2467.181 kb on + strand, within ECD_02374 at 2467.181 kb on + strand, within ECD_02374 at 2467.181 kb on + strand, within ECD_02374 at 2467.181 kb on + strand, within ECD_02374 at 2467.182 kb on - strand, within ECD_02374 at 2467.182 kb on - strand, within ECD_02374 at 2467.532 kb on - strand, within ECD_02374 at 2467.532 kb on - strand, within ECD_02374 at 2467.597 kb on - strand, within ECD_02374 at 2467.666 kb on - strand, within ECD_02374 at 2467.722 kb on + strand, within ECD_02374 at 2467.742 kb on + strand, within ECD_02374 at 2467.742 kb on + strand, within ECD_02374 at 2467.763 kb on + strand, within ECD_02374 at 2467.766 kb on + strand, within ECD_02374 at 2467.810 kb on - strand, within ECD_02374 at 2467.884 kb on + strand, within ECD_02374 at 2467.904 kb on + strand, within ECD_02374 at 2467.920 kb on - strand, within ECD_02374 at 2468.097 kb on - strand, within ECD_02374 at 2468.116 kb on - strand, within ECD_02374 at 2468.238 kb on - strand at 2468.278 kb on + strand at 2468.278 kb on + strand at 2468.279 kb on - strand at 2468.279 kb on - strand at 2468.279 kb on - strand at 2468.279 kb on - strand at 2468.307 kb on - strand at 2468.361 kb on - strand at 2468.361 kb on - strand at 2468.426 kb on - strand at 2468.439 kb on + strand at 2468.440 kb on - strand at 2468.440 kb on - strand at 2468.450 kb on - strand at 2468.530 kb on + strand at 2468.531 kb on - strand at 2468.531 kb on - strand at 2468.533 kb on - strand at 2468.571 kb on + strand at 2468.611 kb on - strand at 2468.614 kb on + strand at 2468.615 kb on - strand at 2468.663 kb on - strand at 2468.845 kb on - strand at 2469.299 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction JK16 remove 2,465,439 + -0.5 2,465,440 - -1.4 2,465,480 + +0.1 2,465,481 - -0.3 2,465,481 - +0.0 2,465,481 - +0.5 2,465,725 + -0.1 2,465,734 + -0.5 2,465,734 + -0.7 2,465,734 + +1.4 2,465,734 + +0.9 2,465,735 - -0.1 2,465,735 - +1.1 2,465,735 - -0.8 2,465,735 - -0.7 2,465,738 - -0.2 2,465,767 + ECD_02373 0.12 -0.7 2,465,768 - ECD_02373 0.13 +0.1 2,466,358 - +1.1 2,466,400 - +0.4 2,466,400 - +0.8 2,466,468 - -0.2 2,466,468 - -0.9 2,466,610 + ECD_02374 0.15 +0.8 2,467,052 + ECD_02374 0.37 +0.3 2,467,053 - ECD_02374 0.37 +0.3 2,467,064 + ECD_02374 0.37 +0.6 2,467,068 + ECD_02374 0.38 +0.2 2,467,181 + ECD_02374 0.43 -0.9 2,467,181 + ECD_02374 0.43 +0.9 2,467,181 + ECD_02374 0.43 +0.1 2,467,181 + ECD_02374 0.43 +0.8 2,467,181 + ECD_02374 0.43 +0.6 2,467,181 + ECD_02374 0.43 +0.0 2,467,182 - ECD_02374 0.43 -0.4 2,467,182 - ECD_02374 0.43 -0.3 2,467,532 - ECD_02374 0.61 +0.8 2,467,532 - ECD_02374 0.61 -1.0 2,467,597 - ECD_02374 0.64 -2.3 2,467,666 - ECD_02374 0.67 -0.2 2,467,722 + ECD_02374 0.70 +0.3 2,467,742 + ECD_02374 0.71 -0.9 2,467,742 + ECD_02374 0.71 -0.1 2,467,763 + ECD_02374 0.72 -1.4 2,467,766 + ECD_02374 0.72 -1.0 2,467,810 - ECD_02374 0.74 -1.1 2,467,884 + ECD_02374 0.78 -1.0 2,467,904 + ECD_02374 0.79 +0.6 2,467,920 - ECD_02374 0.80 +0.3 2,468,097 - ECD_02374 0.89 +0.1 2,468,116 - ECD_02374 0.90 +1.7 2,468,238 - -0.4 2,468,278 + +0.3 2,468,278 + +0.7 2,468,279 - +0.3 2,468,279 - +1.4 2,468,279 - -0.7 2,468,279 - -0.7 2,468,307 - -1.1 2,468,361 - -0.7 2,468,361 - +1.3 2,468,426 - +0.4 2,468,439 + -0.5 2,468,440 - -0.1 2,468,440 - -0.4 2,468,450 - -0.2 2,468,530 + +0.5 2,468,531 - -0.1 2,468,531 - +0.2 2,468,533 - +0.7 2,468,571 + +0.3 2,468,611 - -1.0 2,468,614 + +1.1 2,468,615 - +0.3 2,468,663 - +0.6 2,468,845 - +1.1 2,469,299 - -0.5
Or see this region's nucleotide sequence