Experiment: K25
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03430 and ECD_03431 are separated by 12 nucleotides ECD_03431 and ECD_03432 are separated by 3 nucleotides
ECD_03430: ECD_03430 - 2,3-diketo-L-gulonate TRAP transporter large permease protein, at 3,606,956 to 3,608,233
_03430
ECD_03431: ECD_03431 - 2,3-diketo-L-gulonate-binding periplasmic protein, at 3,608,246 to 3,609,232
_03431
ECD_03432: ECD_03432 - L-xylulose kinase, at 3,609,236 to 3,610,732
_03432
Position (kb)
3608
3609
3610 Strain fitness (log2 ratio)
-2
-1
0
1 at 3607.258 kb on + strand, within ECD_03430 at 3607.258 kb on + strand, within ECD_03430 at 3607.259 kb on - strand, within ECD_03430 at 3607.259 kb on - strand, within ECD_03430 at 3607.259 kb on - strand, within ECD_03430 at 3607.347 kb on - strand, within ECD_03430 at 3607.402 kb on + strand, within ECD_03430 at 3607.423 kb on + strand, within ECD_03430 at 3607.427 kb on - strand, within ECD_03430 at 3607.459 kb on + strand, within ECD_03430 at 3607.459 kb on + strand, within ECD_03430 at 3607.460 kb on - strand, within ECD_03430 at 3607.516 kb on + strand, within ECD_03430 at 3607.516 kb on + strand, within ECD_03430 at 3607.517 kb on - strand, within ECD_03430 at 3607.549 kb on - strand, within ECD_03430 at 3607.694 kb on + strand, within ECD_03430 at 3607.717 kb on + strand, within ECD_03430 at 3607.718 kb on - strand, within ECD_03430 at 3607.718 kb on - strand, within ECD_03430 at 3607.718 kb on - strand, within ECD_03430 at 3607.755 kb on + strand, within ECD_03430 at 3607.755 kb on + strand, within ECD_03430 at 3607.756 kb on - strand, within ECD_03430 at 3607.756 kb on - strand, within ECD_03430 at 3607.912 kb on + strand, within ECD_03430 at 3607.913 kb on - strand, within ECD_03430 at 3607.913 kb on - strand, within ECD_03430 at 3607.966 kb on - strand, within ECD_03430 at 3607.966 kb on - strand, within ECD_03430 at 3608.065 kb on + strand, within ECD_03430 at 3608.481 kb on + strand, within ECD_03431 at 3608.481 kb on + strand, within ECD_03431 at 3608.482 kb on - strand, within ECD_03431 at 3608.661 kb on + strand, within ECD_03431 at 3608.717 kb on - strand, within ECD_03431 at 3608.831 kb on + strand, within ECD_03431 at 3608.831 kb on + strand, within ECD_03431 at 3608.832 kb on - strand, within ECD_03431 at 3608.942 kb on + strand, within ECD_03431 at 3608.988 kb on + strand, within ECD_03431 at 3608.989 kb on - strand, within ECD_03431 at 3608.989 kb on - strand, within ECD_03431 at 3608.989 kb on - strand, within ECD_03431 at 3608.989 kb on - strand, within ECD_03431 at 3609.037 kb on + strand, within ECD_03431 at 3609.041 kb on + strand, within ECD_03431 at 3609.041 kb on + strand, within ECD_03431 at 3609.041 kb on + strand, within ECD_03431 at 3609.041 kb on + strand, within ECD_03431 at 3609.042 kb on - strand, within ECD_03431 at 3609.230 kb on + strand at 3609.259 kb on - strand at 3609.424 kb on + strand, within ECD_03432 at 3609.425 kb on - strand, within ECD_03432 at 3609.652 kb on - strand, within ECD_03432 at 3609.652 kb on - strand, within ECD_03432 at 3609.735 kb on + strand, within ECD_03432 at 3609.766 kb on + strand, within ECD_03432 at 3609.766 kb on + strand, within ECD_03432 at 3609.767 kb on - strand, within ECD_03432 at 3609.806 kb on + strand, within ECD_03432 at 3609.807 kb on - strand, within ECD_03432 at 3610.006 kb on + strand, within ECD_03432 at 3610.063 kb on - strand, within ECD_03432 at 3610.063 kb on - strand, within ECD_03432 at 3610.085 kb on + strand, within ECD_03432 at 3610.085 kb on + strand, within ECD_03432 at 3610.086 kb on - strand, within ECD_03432 at 3610.086 kb on - strand, within ECD_03432 at 3610.086 kb on - strand, within ECD_03432 at 3610.086 kb on - strand, within ECD_03432 at 3610.086 kb on - strand, within ECD_03432 at 3610.092 kb on - strand, within ECD_03432 at 3610.092 kb on - strand, within ECD_03432 at 3610.092 kb on - strand, within ECD_03432 at 3610.100 kb on + strand, within ECD_03432 at 3610.100 kb on + strand, within ECD_03432 at 3610.141 kb on + strand, within ECD_03432
Per-strain Table
Position Strand Gene LocusTag Fraction K25 remove 3,607,258 + ECD_03430 0.24 -0.6 3,607,258 + ECD_03430 0.24 +0.2 3,607,259 - ECD_03430 0.24 -0.1 3,607,259 - ECD_03430 0.24 +0.2 3,607,259 - ECD_03430 0.24 -0.5 3,607,347 - ECD_03430 0.31 -0.1 3,607,402 + ECD_03430 0.35 +0.4 3,607,423 + ECD_03430 0.37 +0.4 3,607,427 - ECD_03430 0.37 +0.5 3,607,459 + ECD_03430 0.39 -0.7 3,607,459 + ECD_03430 0.39 -0.2 3,607,460 - ECD_03430 0.39 +0.8 3,607,516 + ECD_03430 0.44 +0.3 3,607,516 + ECD_03430 0.44 +0.0 3,607,517 - ECD_03430 0.44 +0.5 3,607,549 - ECD_03430 0.46 -0.7 3,607,694 + ECD_03430 0.58 +1.2 3,607,717 + ECD_03430 0.60 +0.4 3,607,718 - ECD_03430 0.60 -0.0 3,607,718 - ECD_03430 0.60 -0.0 3,607,718 - ECD_03430 0.60 +0.6 3,607,755 + ECD_03430 0.63 -0.5 3,607,755 + ECD_03430 0.63 +0.3 3,607,756 - ECD_03430 0.63 -0.5 3,607,756 - ECD_03430 0.63 +0.0 3,607,912 + ECD_03430 0.75 -0.4 3,607,913 - ECD_03430 0.75 +0.4 3,607,913 - ECD_03430 0.75 -0.1 3,607,966 - ECD_03430 0.79 -0.8 3,607,966 - ECD_03430 0.79 -0.3 3,608,065 + ECD_03430 0.87 +0.3 3,608,481 + ECD_03431 0.24 +0.3 3,608,481 + ECD_03431 0.24 -1.4 3,608,482 - ECD_03431 0.24 +0.0 3,608,661 + ECD_03431 0.42 +1.2 3,608,717 - ECD_03431 0.48 +0.2 3,608,831 + ECD_03431 0.59 +0.4 3,608,831 + ECD_03431 0.59 +0.6 3,608,832 - ECD_03431 0.59 -0.1 3,608,942 + ECD_03431 0.71 -0.1 3,608,988 + ECD_03431 0.75 +0.5 3,608,989 - ECD_03431 0.75 -0.5 3,608,989 - ECD_03431 0.75 -1.5 3,608,989 - ECD_03431 0.75 -1.0 3,608,989 - ECD_03431 0.75 -0.1 3,609,037 + ECD_03431 0.80 -1.9 3,609,041 + ECD_03431 0.81 +1.0 3,609,041 + ECD_03431 0.81 +0.1 3,609,041 + ECD_03431 0.81 +0.3 3,609,041 + ECD_03431 0.81 -0.8 3,609,042 - ECD_03431 0.81 +0.3 3,609,230 + +0.3 3,609,259 - -0.4 3,609,424 + ECD_03432 0.13 -0.3 3,609,425 - ECD_03432 0.13 -0.2 3,609,652 - ECD_03432 0.28 -0.2 3,609,652 - ECD_03432 0.28 -1.4 3,609,735 + ECD_03432 0.33 -0.0 3,609,766 + ECD_03432 0.35 +0.6 3,609,766 + ECD_03432 0.35 -0.8 3,609,767 - ECD_03432 0.35 +0.1 3,609,806 + ECD_03432 0.38 +0.3 3,609,807 - ECD_03432 0.38 +0.3 3,610,006 + ECD_03432 0.51 +0.6 3,610,063 - ECD_03432 0.55 -0.7 3,610,063 - ECD_03432 0.55 -1.7 3,610,085 + ECD_03432 0.57 -1.1 3,610,085 + ECD_03432 0.57 -0.4 3,610,086 - ECD_03432 0.57 +0.2 3,610,086 - ECD_03432 0.57 -0.1 3,610,086 - ECD_03432 0.57 +0.3 3,610,086 - ECD_03432 0.57 -0.8 3,610,086 - ECD_03432 0.57 -0.5 3,610,092 - ECD_03432 0.57 -0.7 3,610,092 - ECD_03432 0.57 +0.5 3,610,092 - ECD_03432 0.57 -0.0 3,610,100 + ECD_03432 0.58 +0.4 3,610,100 + ECD_03432 0.58 -0.7 3,610,141 + ECD_03432 0.60 -0.7
Or see this region's nucleotide sequence